FFCP PHASE1:Hg19::chr2:20402582..20402593,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20402582..20402593,- | |||
|description=CAGE_peak_at_chr2:20402582..20402593,- | |description=CAGE_peak_at_chr2:20402582..20402593,- | ||
|id=chr2:20402582..20402593,- | |id=chr2:20402582..20402593,- | ||
|ontology_enrichment_celltype=CL:0000066!3.17e-15!254;CL:0002076!4.53e-14!43;CL:0000223!9.73e-14!59;CL:0002621!8.35e-08!3;CL:0002368!9.66e-08!13;CL:0002159!1.17e-07!13;CL:0002251!4.21e-07!21 | |ontology_enrichment_celltype=CL:0000066!3.17e-15!254;CL:0002076!4.53e-14!43;CL:0000223!9.73e-14!59;CL:0002621!8.35e-08!3;CL:0002368!9.66e-08!13;CL:0002159!1.17e-07!13;CL:0002251!4.21e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.07e-33;3!CL:0002328;1.05e-09;3!CL:0002231;1.47e-09;3!CL:0002076;7.91e-09;42!CL:0000244;1.75e-07;4!CL:0002327;1.75e-07;4!CL:0000731;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.09e-33,3;CL:0000223,6.38e-11,58;CL:0002076,7.06e-10,42;CL:0002328,1.01e-09,3;CL:0002231,1.19e-09,3;CL:0000244,1.59e-07,4;CL:0000731,1.59e-07,4;CL:0002327,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.75e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.37e-13!169;UBERON:0000925!4.37e-13!169;UBERON:0006595!4.37e-13!169;UBERON:0001007!1.12e-10!155;UBERON:0001555!1.12e-10!155;UBERON:0007026!1.12e-10!155;UBERON:0000161!2.54e-10!35;UBERON:0003102!3.43e-10!95;UBERON:0000166!1.03e-08!21;UBERON:0001004!1.09e-08!72;UBERON:0004921!1.48e-08!129;UBERON:0004185!1.48e-08!129;UBERON:0000077!7.70e-08!130;UBERON:0001949!8.35e-08!3;UBERON:0005911!1.13e-07!82;UBERON:0000165!2.39e-07!28;UBERON:0000930!2.39e-07!28;UBERON:0000466!2.41e-07!126;UBERON:0005157!8.54e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.07e-33;3!UBERON:0000486;3.61e-19;12!UBERON:0003929;4.37e-15;7!UBERON:0003350;2.49e-13;8!UBERON:0001828;2.49e-13;8!UBERON:0005911;1.91e-11;36!UBERON:0004807;7.53e-11;22!UBERON:0004815;1.05e-09;3!UBERON:0002031;1.05e-09;3!UBERON:0003729;1.42e-08;13!UBERON:0010371;9.84e-08;31!UBERON:0001911;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.09e-33,3;UBERON:0003350,3.20e-13,8;UBERON:0001828,3.20e-13,8;UBERON:0005911,5.57e-11,82;UBERON:0004815,1.01e-09,3;UBERON:0002031,1.01e-09,3;UBERON:0004807,1.27e-08,28;UBERON:0003729,1.65e-08,13;UBERON:0003929,9.77e-08,54;UBERON:0001911,1.80e-07,4;UBERON:0005333,1.80e-07,4;UBERON:0008425,1.80e-07,4;UBERON:0005311,1.80e-07,4;UBERON:0000161,7.99e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.439001141634502,0,2.11110842064425,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.268675568108545,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0.802025881213139,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0.118193840883968,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,1.15956511897978,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.439001141634502,0,2.11110842064425,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.268675568108545,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0.802025881213139,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0.118193840883968,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:20402582..20402593,- | |short_description=p@chr2:20402582..20402593,- | ||
}} | }} |
Latest revision as of 05:13, 29 July 2015
Short description: | p@chr2:20402582..20402593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402582..20402593, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.09e-33 | 3 |
endodermal cell | 6.38e-11 | 58 |
endo-epithelial cell | 7.06e-10 | 42 |
bronchial epithelial cell | 1.01e-09 | 3 |
epithelial cell of prostate | 1.19e-09 | 3 |
transitional epithelial cell | 1.59e-07 | 4 |
urothelial cell | 1.59e-07 | 4 |
mammary gland epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.09e-33 | 3 |
epithelium of mucosa | 3.20e-13 | 8 |
gingiva | 3.20e-13 | 8 |
endo-epithelium | 5.57e-11 | 82 |
lower respiratory tract epithelium | 1.01e-09 | 3 |
epithelium of bronchus | 1.01e-09 | 3 |
respiratory system epithelium | 1.27e-08 | 28 |
mouth mucosa | 1.65e-08 | 13 |
gut epithelium | 9.77e-08 | 54 |
mammary gland | 1.80e-07 | 4 |
mammary bud | 1.80e-07 | 4 |
mammary ridge | 1.80e-07 | 4 |
mammary placode | 1.80e-07 | 4 |
orifice | 7.99e-07 | 36 |