FFCP PHASE1:Hg19::chr5:52778777..52778791,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3971|TSSclassifier=N|UniProt=|association_with_transcript=253bp_to_ENST00000491717_5end|description=CAGE_peak_5_at_FST_5end|id=chr5:52778777..52778791,+|ontology_enrichment_celltype=CL:0000057!6.38e-15!75;CL:0000055!3.92e-10!180;CL:0000548!1.54e-09!679;CL:0000004!1.54e-09!679;CL:0000255!1.54e-09!679;CL:0000012!2.79e-09!682;CL:0002371!5.43e-09!591;CL:0002076!8.91e-09!43;CL:0000223!2.02e-08!59;CL:0000144!3.30e-08!625;CL:0002368!7.46e-07!13|ontology_enrichment_celltype_v019=CL:0002328;1.51e-14;3!CL:0002202;7.05e-13;9!CL:0002632;7.05e-13;9!CL:0002368;2.17e-12;13!CL:0002556;3.36e-08;6!CL:0000307;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002328,6.63e-15,3;CL:0002202,4.30e-13,9;CL:0002632,4.30e-13,9;CL:0002368,1.35e-12,13;CL:0002556,3.44e-08,6;CL:0002076,1.05e-07,42;CL:0000068,2.47e-07,3;CL:0000069,2.47e-07,3;CL:0000307,2.47e-07,3;CL:0000377,2.47e-07,3|ontology_enrichment_development_v019=CL:0000377;2.63e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!6.34e-15!95;UBERON:0000165!5.40e-09!28;UBERON:0000930!5.40e-09!28;UBERON:0000161!4.71e-07!35|ontology_enrichment_uberon_v019=UBERON:0004815;1.51e-14;3!UBERON:0002031;1.51e-14;3!UBERON:0002185;6.36e-09;5!UBERON:0001758;3.36e-08;6!UBERON:0003672;3.36e-08;6!UBERON:0007196;1.28e-07;15!UBERON:0001558;1.28e-07;15!UBERON:0011137;2.37e-07;11!UBERON:0010323;2.37e-07;11!UBERON:0003129;4.43e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.63e-15,3;UBERON:0002031,6.63e-15,3;UBERON:0002185,3.92e-09,5;UBERON:0000485,1.76e-08,9;UBERON:0001758,3.44e-08,6;UBERON:0003672,3.44e-08,6;UBERON:0007196,9.63e-08,15;UBERON:0001558,9.63e-08,15;UBERON:0010323,2.44e-07,11;UBERON:0003129,4.52e-07,7|phase1_expression=0.363356758541113,1.2846031433459,0.281908808191942,3.00219895059391,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,2.409647350226,1.47901604066715,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0.397227542439656,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,1.17160715916898,0,0,0,1.64408298101271,0.161872944368132,0.421352420106746,0,0.245668634623536,0.206651562351531,3.56400857184616,4.45080472701402,0,0,0.336672227908132,0.375355559615893,0,5.26773145057006,10.1140972613676,3.00476117813194,0.113432183160021,0.717558542755448,0.85422955527427,0,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.460249493211497,0.323292113637624,1.42003837006646,0.503760491138201,0,0.773043412653187,0.818238361772504,0.573609190778008,0.609868530647977,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0.768251997860379,0,1.00528972411631,0.648119116109707,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.503946384596579,1.27597587518148,0.268675568108545,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0.468565659970853,0,0,0,0,0.184369168541703,2.69339204851057,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.767309866440312,1.96462066103151,0,0.511707249066704,0.64341568457443,0,0.616838775210622,0,0.0821271560138091,2.59627214591811,0.232420756919918,0,2.20557117333613,0.460404944679482,0.114814448164607,2.00300284807389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,0.638063562472921,0,0,0.62962469366128,0,0.616067160352178,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.823611089208164,0.235624804691373,0,0,0.842516912477962,0,2.19342140668156,0,0,0.282810863907425,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,1.47775344708365,0.658589785919804,0,0,0.48111056362756,1.34060455107157,3.26672954583968,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3971 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=253bp_to_ENST00000491717_5end | |||
|description=CAGE_peak_5_at_FST_5end | |||
|id=chr5:52778777..52778791,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.38e-15!75;CL:0000055!3.92e-10!180;CL:0000548!1.54e-09!679;CL:0000004!1.54e-09!679;CL:0000255!1.54e-09!679;CL:0000012!2.79e-09!682;CL:0002371!5.43e-09!591;CL:0002076!8.91e-09!43;CL:0000223!2.02e-08!59;CL:0000144!3.30e-08!625;CL:0002368!7.46e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.51e-14;3!CL:0002202;7.05e-13;9!CL:0002632;7.05e-13;9!CL:0002368;2.17e-12;13!CL:0002556;3.36e-08;6!CL:0000307;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,6.63e-15,3;CL:0002202,4.30e-13,9;CL:0002632,4.30e-13,9;CL:0002368,1.35e-12,13;CL:0002556,3.44e-08,6;CL:0002076,1.05e-07,42;CL:0000068,2.47e-07,3;CL:0000069,2.47e-07,3;CL:0000307,2.47e-07,3;CL:0000377,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!6.34e-15!95;UBERON:0000165!5.40e-09!28;UBERON:0000930!5.40e-09!28;UBERON:0000161!4.71e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.51e-14;3!UBERON:0002031;1.51e-14;3!UBERON:0002185;6.36e-09;5!UBERON:0001758;3.36e-08;6!UBERON:0003672;3.36e-08;6!UBERON:0007196;1.28e-07;15!UBERON:0001558;1.28e-07;15!UBERON:0011137;2.37e-07;11!UBERON:0010323;2.37e-07;11!UBERON:0003129;4.43e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.63e-15,3;UBERON:0002031,6.63e-15,3;UBERON:0002185,3.92e-09,5;UBERON:0000485,1.76e-08,9;UBERON:0001758,3.44e-08,6;UBERON:0003672,3.44e-08,6;UBERON:0007196,9.63e-08,15;UBERON:0001558,9.63e-08,15;UBERON:0010323,2.44e-07,11;UBERON:0003129,4.52e-07,7 | |||
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|short_description=p5@FST | |||
}} |
Revision as of 15:50, 13 September 2013
Short description: | p5@FST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FST_5end |
Coexpression cluster: | NA |
Association with transcript: | 253bp_to_ENST00000491717_5end |
EntrezGene: | FST |
HGNC: | 3971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 6.63e-15 | 3 |
epithelial cell of tracheobronchial tree | 4.30e-13 | 9 |
epithelial cell of lower respiratory tract | 4.30e-13 | 9 |
respiratory epithelial cell | 1.35e-12 | 13 |
fibroblast of periodontium | 3.44e-08 | 6 |
endo-epithelial cell | 1.05e-07 | 42 |
duct epithelial cell | 2.47e-07 | 3 |
branched duct epithelial cell | 2.47e-07 | 3 |
tracheal epithelial cell | 2.47e-07 | 3 |
tracheoblast | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.63e-15 | 3 |
epithelium of bronchus | 6.63e-15 | 3 |
bronchus | 3.92e-09 | 5 |
simple columnar epithelium | 1.76e-08 | 9 |
periodontium | 3.44e-08 | 6 |
dentition | 3.44e-08 | 6 |
tracheobronchial tree | 9.63e-08 | 15 |
lower respiratory tract | 9.63e-08 | 15 |
cranial skeletal system | 2.44e-07 | 11 |
skull | 4.52e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.