FFCP PHASE1:Hg19::chr1:203148219..203148232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203148219..203148232,- | |||
|description=CAGE_peak_at_chr1:203148219..203148232,- | |description=CAGE_peak_at_chr1:203148219..203148232,- | ||
|id=chr1:203148219..203148232,- | |id=chr1:203148219..203148232,- | ||
|ontology_enrichment_celltype=CL:0000153!5.68e-14!9;CL:0000447!5.68e-14!9;CL:0000667!4.24e-11!6;CL:0000058!4.24e-11!6;CL:0000138!4.24e-11!6;CL:0000135!1.20e-08!3;CL:0000386!1.20e-08!3;CL:0000388!1.20e-08!3;CL:0000327!1.63e-08!14;CL:0000499!7.43e-08!27 | |ontology_enrichment_celltype=CL:0000153!5.68e-14!9;CL:0000447!5.68e-14!9;CL:0000667!4.24e-11!6;CL:0000058!4.24e-11!6;CL:0000138!4.24e-11!6;CL:0000135!1.20e-08!3;CL:0000386!1.20e-08!3;CL:0000388!1.20e-08!3;CL:0000327!1.63e-08!14;CL:0000499!7.43e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.49e-32;9!CL:0000447;4.49e-32;9!CL:0000235;6.61e-22;6!CL:0000138;9.13e-22;6!CL:0000327;4.33e-19;15!CL:0000499;1.43e-17;28!CL:0000214;4.85e-12;3!CL:0000135;6.20e-12;3!CL:0000388;6.20e-12;3!CL:0000182;8.56e-11;12!CL:0000151;5.20e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.93e-32,9;CL:0000447,3.93e-32,9;CL:0000235,5.48e-22,6;CL:0000058,7.99e-22,6;CL:0000138,7.99e-22,6;CL:0000327,4.00e-19,15;CL:0000499,1.31e-17,28;CL:0000214,4.86e-12,3;CL:0000135,5.72e-12,3;CL:0000388,5.72e-12,3;CL:0000182,1.00e-10,12;CL:0000151,2.93e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.17e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.62e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.69e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002298!4.98e-10!8;UBERON:0002308!1.04e-08!9;UBERON:0000125!1.04e-08!9;UBERON:0000043!1.20e-08!3;UBERON:0002420!1.39e-08!9;UBERON:0007245!1.39e-08!9;UBERON:0010009!1.39e-08!9;UBERON:0010011!1.39e-08!9;UBERON:0000454!1.39e-08!9;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0007023!3.18e-08!115;UBERON:0001017!9.47e-08!82;UBERON:0001896!1.04e-07!3;UBERON:0005290!1.04e-07!3;UBERON:0010096!1.04e-07!3;UBERON:0006331!1.41e-07!3;UBERON:0000073!1.68e-07!94;UBERON:0001016!1.68e-07!94;UBERON:0005743!3.62e-07!86;UBERON:0002616!7.03e-07!59;UBERON:0002020!7.66e-07!34;UBERON:0003528!7.66e-07!34 | |ontology_enrichment_uberon=UBERON:0002298!4.98e-10!8;UBERON:0002308!1.04e-08!9;UBERON:0000125!1.04e-08!9;UBERON:0000043!1.20e-08!3;UBERON:0002420!1.39e-08!9;UBERON:0007245!1.39e-08!9;UBERON:0010009!1.39e-08!9;UBERON:0010011!1.39e-08!9;UBERON:0000454!1.39e-08!9;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0007023!3.18e-08!115;UBERON:0001017!9.47e-08!82;UBERON:0001896!1.04e-07!3;UBERON:0005290!1.04e-07!3;UBERON:0010096!1.04e-07!3;UBERON:0006331!1.41e-07!3;UBERON:0000073!1.68e-07!94;UBERON:0001016!1.68e-07!94;UBERON:0005743!3.62e-07!86;UBERON:0002616!7.03e-07!59;UBERON:0002020!7.66e-07!34;UBERON:0003528!7.66e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.85e-12;3!UBERON:0007616;4.85e-12;3!UBERON:0002217;4.85e-12;3!UBERON:0002018;4.85e-12;3!UBERON:0007846;6.20e-12;3!UBERON:0000043;6.20e-12;3!UBERON:0007845;6.20e-12;3!UBERON:0002107;2.88e-10;19!UBERON:0006925;2.88e-10;19!UBERON:0001282;3.98e-09;1!UBERON:0009842;3.98e-09;1!UBERON:0003704;3.98e-09;1!UBERON:0001171;3.98e-09;1!UBERON:0001172;3.98e-09;1!UBERON:0002365;9.63e-09;31!UBERON:0002330;9.63e-09;31!UBERON:0002423;9.23e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.86e-12,3;UBERON:0007616,4.86e-12,3;UBERON:0002217,4.86e-12,3;UBERON:0002018,4.86e-12,3;UBERON:0007846,5.72e-12,3;UBERON:0000043,5.72e-12,3;UBERON:0007845,5.72e-12,3;UBERON:0002107,3.48e-10,19;UBERON:0006925,3.48e-10,19;UBERON:0008836,3.48e-10,19;UBERON:0001282,5.72e-09,1;UBERON:0009842,5.72e-09,1;UBERON:0003704,5.72e-09,1;UBERON:0001171,5.72e-09,1;UBERON:0001172,5.72e-09,1;UBERON:0008835,8.96e-09,22;UBERON:0003894,8.96e-09,22;UBERON:0002365,1.23e-08,31;UBERON:0002330,1.23e-08,31;UBERON:0009854,2.19e-08,23;UBERON:0007499,1.06e-07,25;UBERON:0009497,1.06e-07,25;UBERON:0000015,1.06e-07,25;UBERON:0002423,1.06e-07,25;UBERON:0006235,1.06e-07,25;UBERON:0004161,1.06e-07,25;UBERON:0009856,2.14e-07,26 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,3.97583067623023,2.00535164254356,12.4568006306308,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,3.04205544681009,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,3.64871341923571,0,25.3000727379638,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,7.38876723541824,7.57378253807774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.667396566847634,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0.258565912723101,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,1.14681839138014,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,1.89403005275089,8.80487656134013,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.751288044986092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,3.60124819818579,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,1.24329698497822,0,0,0.430227358820278,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,2.97596014533401,15.7139713734682,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:203148219..203148232,- | |short_description=p@chr1:203148219..203148232,- | ||
}} | }} |
Latest revision as of 02:23, 28 July 2015
Short description: | p@chr1:203148219..203148232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203148219..203148232, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.93e-32 | 9 |
carbohydrate secreting cell | 3.93e-32 | 9 |
macrophage | 5.48e-22 | 6 |
chondroblast | 7.99e-22 | 6 |
chondrocyte | 7.99e-22 | 6 |
extracellular matrix secreting cell | 4.00e-19 | 15 |
stromal cell | 1.31e-17 | 28 |
synovial cell | 4.86e-12 | 3 |
fibrocyte | 5.72e-12 | 3 |
tendon cell | 5.72e-12 | 3 |
hepatocyte | 1.00e-10 | 12 |
secretory cell | 2.93e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.86e-12 | 3 |
layer of synovial tissue | 4.86e-12 | 3 |
synovial joint | 4.86e-12 | 3 |
synovial membrane of synovial joint | 4.86e-12 | 3 |
dense regular connective tissue | 5.72e-12 | 3 |
tendon | 5.72e-12 | 3 |
regular connective tissue | 5.72e-12 | 3 |
liver | 3.48e-10 | 19 |
digestive gland | 3.48e-10 | 19 |
liver bud | 3.48e-10 | 19 |
intralobular bile duct | 5.72e-09 | 1 |
acinus | 5.72e-09 | 1 |
intrahepatic bile duct | 5.72e-09 | 1 |
portal lobule | 5.72e-09 | 1 |
hepatic acinus | 5.72e-09 | 1 |
hepatic diverticulum | 8.96e-09 | 22 |
liver primordium | 8.96e-09 | 22 |
exocrine gland | 1.23e-08 | 31 |
exocrine system | 1.23e-08 | 31 |
digestive tract diverticulum | 2.19e-08 | 23 |
epithelial sac | 1.06e-07 | 25 |
epithelium of foregut-midgut junction | 1.06e-07 | 25 |
anatomical boundary | 1.06e-07 | 25 |
hepatobiliary system | 1.06e-07 | 25 |
foregut-midgut junction | 1.06e-07 | 25 |
septum transversum | 1.06e-07 | 25 |
sac | 2.14e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.69e-09 | 1 |