FFCP PHASE2:Mm9::chr9:21420674..21420725,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@Smarca4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Smarca4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:108 |
| Association with transcript: | 0bp_to_ENSMUST00000174008_5end |
| EntrezGene: | Smarca4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Smarca4 |
|---|
0
50
100
150
200
250
300
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 2.00e-09 | 43 |
| neuron | 5.27e-09 | 33 |
| neuronal stem cell | 5.27e-09 | 33 |
| neuroblast | 5.27e-09 | 33 |
| electrically signaling cell | 5.27e-09 | 33 |
| ectodermal cell | 7.38e-09 | 44 |
| neurectodermal cell | 7.38e-09 | 44 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 2.84e-13 | 95 |
| ectoderm | 2.84e-13 | 95 |
| presumptive ectoderm | 2.84e-13 | 95 |
| central nervous system | 7.34e-12 | 73 |
| nervous system | 7.56e-12 | 75 |
| neurectoderm | 1.17e-11 | 64 |
| neural plate | 1.17e-11 | 64 |
| presumptive neural plate | 1.17e-11 | 64 |
| ecto-epithelium | 1.27e-10 | 73 |
| pre-chordal neural plate | 6.74e-09 | 49 |
Showing 1 to 10 of 19 entries
