FFCP PHASE1:Mm9::chr14:32594184..32594200,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1663|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:32594184..32594200,-|id=chr14:32594184..32594200,-|ontology_enrichment_celltype=CL:0000107!4.18e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.75e-16,9;CL:0000393,2.13e-11,39;CL:0000211,2.13e-11,39;CL:0002319,6.66e-10,43;CL:0000540,7.83e-10,33;CL:0000047,7.83e-10,33;CL:0000031,7.83e-10,33;CL:0000404,7.83e-10,33;CL:0000221,1.46e-09,44;CL:0000133,1.46e-09,44;CL:0000723,6.44e-09,91;CL:0000048,6.44e-09,91;CL:0000034,1.26e-08,97;CL:0002321,3.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.14e-11!102;UBERON:0000924!6.14e-11!102;UBERON:0006601!6.14e-11!102;UBERON:0000073!1.66e-09!75;UBERON:0001016!1.66e-09!75;UBERON:0000010!1.96e-09!11;UBERON:0001017!1.51e-08!73;UBERON:0005743!1.51e-08!73;UBERON:0002410!4.18e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.65e-19,11;UBERON:0001016,8.64e-18,75;UBERON:0002410,1.75e-16,9;UBERON:0004121,3.54e-16,95;UBERON:0000924,3.54e-16,95;UBERON:0006601,3.54e-16,95;UBERON:0001017,1.05e-15,73;UBERON:0002346,1.51e-09,64;UBERON:0003075,1.51e-09,64;UBERON:0007284,1.51e-09,64;UBERON:0010371,2.40e-08,73;UBERON:0000073,1.03e-07,54;UBERON:0002950,9.45e-07,4;UBERON:0001891,9.45e-07,4;UBERON:0009616,9.45e-07,4;UBERON:0010286,9.45e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.607425802169478,0,0.473193248037357,0.137114433605739,0,0.510259740906419,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,1.67412652294763,0.7813353445238,2.61761871986899,0,2.04913645487534,0.485510353031154,2.39203954153597,2.23029248682932,2.38610777810186,0.782391344348039,0,0.439372365468944,0.194429899074283,0.279972843250725,1.43752564364972,0.503347818173209,0,0,0.514518872071894,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.91531007127782,2.91852413186863,0,0,0,1.95428099300967,1.68828783009504,2.44477196442896,0.883885756421003,1.56608848879013,0.186399445825301,3.55913108665965,4.00529268565963,0,0,0,0,0.649776417447669,0,0,2.04516387093669,1.29893002301434,0.35333957451034,0.985903938436763,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,2.04946557908083,1.8850203613211,0,1.31796636956512,0,1.52484272487678,4.6435098215495,4.57500602818627,0.628271760564322,2.08589184230732,0.767146371990992,3.74018480207208,2.59586020908412,0.101839363850316,0.497627882440372,0,0.420883711772948,0,0.229902104433473,0.720248519221397,0.30140963567143,0.95251098811859,2.69038812598185,2.15513966487376,1.29351685369508,0,0,0,0,0,0,0.411564272815887,0,2.80885274925294,2.05878325691772,2.27330799516474,0,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.162137619091711,0,0,0,3.15434922846191,0.720332286654991,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,4.52373851817817,4.35124547054968,0,0,6.74312477948726,5.27452589664914,0.163934945376675,0.252470927204373,3.78609863299508,6.24701990874622,5.60100834105277,7.40803273652911,6.01556420022464,5.94460714656548,3.64329631507405,6.13737301613755,10.6727700045561,0.321321316421807,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.968786560175433,0.904693873922338,0.596861720015682,0.328281799490123,0,6.11903496634682,0.341741761595705,0,0.370389054739423,0,0.136694227721025,0,0.849892149969277,0.979660166265606,1.52019971184866,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.584384510907845,0.453460767230423,0,0,0.167884616364078,0.19318959403219,0.563047426353546,0.549454872801795,0,0,1.12950368523413,1.38097570952153,0,1.3748254587495,0.685082519770642,0,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.114870937911227,1.42888107384922,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.715308569841963,0.581385666529314,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,1.22769312950907,0.619747364743864,0.771626443924566,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,1.39120701372253|short_description=p@chr14:32594184..32594200,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1663 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:32594184..32594200,- | |||
|id=chr14:32594184..32594200,- | |||
|ontology_enrichment_celltype=CL:0000107!4.18e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.75e-16,9;CL:0000393,2.13e-11,39;CL:0000211,2.13e-11,39;CL:0002319,6.66e-10,43;CL:0000540,7.83e-10,33;CL:0000047,7.83e-10,33;CL:0000031,7.83e-10,33;CL:0000404,7.83e-10,33;CL:0000221,1.46e-09,44;CL:0000133,1.46e-09,44;CL:0000723,6.44e-09,91;CL:0000048,6.44e-09,91;CL:0000034,1.26e-08,97;CL:0002321,3.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.14e-11!102;UBERON:0000924!6.14e-11!102;UBERON:0006601!6.14e-11!102;UBERON:0000073!1.66e-09!75;UBERON:0001016!1.66e-09!75;UBERON:0000010!1.96e-09!11;UBERON:0001017!1.51e-08!73;UBERON:0005743!1.51e-08!73;UBERON:0002410!4.18e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.65e-19,11;UBERON:0001016,8.64e-18,75;UBERON:0002410,1.75e-16,9;UBERON:0004121,3.54e-16,95;UBERON:0000924,3.54e-16,95;UBERON:0006601,3.54e-16,95;UBERON:0001017,1.05e-15,73;UBERON:0002346,1.51e-09,64;UBERON:0003075,1.51e-09,64;UBERON:0007284,1.51e-09,64;UBERON:0010371,2.40e-08,73;UBERON:0000073,1.03e-07,54;UBERON:0002950,9.45e-07,4;UBERON:0001891,9.45e-07,4;UBERON:0009616,9.45e-07,4;UBERON:0010286,9.45e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.607425802169478,0,0.473193248037357,0.137114433605739,0,0.510259740906419,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,1.67412652294763,0.7813353445238,2.61761871986899,0,2.04913645487534,0.485510353031154,2.39203954153597,2.23029248682932,2.38610777810186,0.782391344348039,0,0.439372365468944,0.194429899074283,0.279972843250725,1.43752564364972,0.503347818173209,0,0,0.514518872071894,0,0,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,1.91531007127782,2.91852413186863,0,0,0,1.95428099300967,1.68828783009504,2.44477196442896,0.883885756421003,1.56608848879013,0.186399445825301,3.55913108665965,4.00529268565963,0,0,0,0,0.649776417447669,0,0,2.04516387093669,1.29893002301434,0.35333957451034,0.985903938436763,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0.352766121407114,0.125666591329675,0,0.433798070759735,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,2.04946557908083,1.8850203613211,0,1.31796636956512,0,1.52484272487678,4.6435098215495,4.57500602818627,0.628271760564322,2.08589184230732,0.767146371990992,3.74018480207208,2.59586020908412,0.101839363850316,0.497627882440372,0,0.420883711772948,0,0.229902104433473,0.720248519221397,0.30140963567143,0.95251098811859,2.69038812598185,2.15513966487376,1.29351685369508,0,0,0,0,0,0,0.411564272815887,0,2.80885274925294,2.05878325691772,2.27330799516474,0,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.162137619091711,0,0,0,3.15434922846191,0.720332286654991,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,4.52373851817817,4.35124547054968,0,0,6.74312477948726,5.27452589664914,0.163934945376675,0.252470927204373,3.78609863299508,6.24701990874622,5.60100834105277,7.40803273652911,6.01556420022464,5.94460714656548,3.64329631507405,6.13737301613755,10.6727700045561,0.321321316421807,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.968786560175433,0.904693873922338,0.596861720015682,0.328281799490123,0,6.11903496634682,0.341741761595705,0,0.370389054739423,0,0.136694227721025,0,0.849892149969277,0.979660166265606,1.52019971184866,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.584384510907845,0.453460767230423,0,0,0.167884616364078,0.19318959403219,0.563047426353546,0.549454872801795,0,0,1.12950368523413,1.38097570952153,0,1.3748254587495,0.685082519770642,0,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.114870937911227,1.42888107384922,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.715308569841963,0.581385666529314,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,1.22769312950907,0.619747364743864,0.771626443924566,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,1.39120701372253 | |||
|short_description=p@chr14:32594184..32594200,- | |||
}} |
Revision as of 02:00, 13 September 2013
Short description: | p@chr14:32594184..32594200, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:32594184..32594200, - |
Coexpression cluster: | MCL_coexpression_mm9:1663 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.75e-16 | 9 |
electrically responsive cell | 2.13e-11 | 39 |
electrically active cell | 2.13e-11 | 39 |
neural cell | 6.66e-10 | 43 |
neuron | 7.83e-10 | 33 |
neuronal stem cell | 7.83e-10 | 33 |
neuroblast | 7.83e-10 | 33 |
electrically signaling cell | 7.83e-10 | 33 |
ectodermal cell | 1.46e-09 | 44 |
neurectodermal cell | 1.46e-09 | 44 |
somatic stem cell | 6.44e-09 | 91 |
multi fate stem cell | 6.44e-09 | 91 |
stem cell | 1.26e-08 | 97 |
embryonic cell | 3.76e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.65e-19 | 11 |
nervous system | 8.64e-18 | 75 |
autonomic nervous system | 1.75e-16 | 9 |
ectoderm-derived structure | 3.54e-16 | 95 |
ectoderm | 3.54e-16 | 95 |
presumptive ectoderm | 3.54e-16 | 95 |
central nervous system | 1.05e-15 | 73 |
neurectoderm | 1.51e-09 | 64 |
neural plate | 1.51e-09 | 64 |
presumptive neural plate | 1.51e-09 | 64 |
ecto-epithelium | 2.40e-08 | 73 |
regional part of nervous system | 1.03e-07 | 54 |
regional part of midbrain | 9.45e-07 | 4 |
midbrain | 9.45e-07 | 4 |
presumptive midbrain | 9.45e-07 | 4 |
midbrain neural tube | 9.45e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.