FFCP PHASE1:Mm9::chr16:23989080..23989091,+: Difference between revisions
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|id=chr16:23989080..23989091,+ | |id=chr16:23989080..23989091,+ | ||
|ontology_enrichment_celltype=CL:0000084!3.62e-07!11;CL:0000827!3.62e-07!11;CL:0000838!3.66e-07!12;CL:0000791!8.40e-07!9;CL:0000789!8.40e-07!9;CL:0002420!8.40e-07!9;CL:0002419!8.40e-07!9;CL:0000790!8.40e-07!9 | |ontology_enrichment_celltype=CL:0000084!3.62e-07!11;CL:0000827!3.62e-07!11;CL:0000838!3.66e-07!12;CL:0000791!8.40e-07!9;CL:0000789!8.40e-07!9;CL:0002420!8.40e-07!9;CL:0002419!8.40e-07!9;CL:0000790!8.40e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.65e-13,8;CL:0000815,1.55e-12,1;CL:0000792,1.55e-12,1;CL:0000213,2.01e-12,1;CL:0002078,2.01e-12,1;CL:0000115,2.01e-12,1;CL:0002262,2.01e-12,1;CL:1000398,2.01e-12,1;CL:0000791,1.10e-11,9;CL:0000789,1.10e-11,9;CL:0002420,1.10e-11,9;CL:0002419,1.10e-11,9;CL:0000790,1.10e-11,9;CL:0000084,1.11e-09,11;CL:0000827,1.11e-09,11;CL:0000838,6.30e-09,12;CL:0000542,2.75e-08,13;CL:0000051,2.75e-08,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.01e-12,1;UBERON:0001281,2.01e-12,1;UBERON:0000353,2.01e-12,1;UBERON:0003497,2.01e-12,1;UBERON:0003909,2.01e-12,1;UBERON:0003928,2.01e-12,1;UBERON:0003835,2.01e-12,1;UBERON:0003513,2.01e-12,1;UBERON:0001280,2.01e-12,1;UBERON:0004647,2.01e-12,1;UBERON:0002294,2.01e-12,1;UBERON:0001173,2.01e-12,1;UBERON:0004912,2.01e-12,1;UBERON:0005171,2.01e-12,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.7115897922731,0.281577444303333,0.70219357896598,0.34243593645101,0.159544317990673,2.39681021903688,0.961624426608971,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,2.3440060335714,0,0,2.73218193983378,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.167782606057736,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.244981598429908,0,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,0.860423876981386,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0.878342391034642,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.407357455401265,0,0,0.420883711772948,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,0.486405680325106,0,0,0,0,1.01031551178845,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.567760340833074,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.7115897922731,0.281577444303333,0.70219357896598,0.34243593645101,0.159544317990673,2.39681021903688,0.961624426608971,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,2.3440060335714,0,0,2.73218193983378,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0.167782606057736,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0,0.244981598429908,0,0.919218786610021,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,0.860423876981386,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0.878342391034642,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.407357455401265,0,0,0.420883711772948,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,0.486405680325106,0,0,0,0,1.01031551178845,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.567760340833074,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,0,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264 | ||
|short_description=p@chr16:23989080..23989091,+ | |short_description=p@chr16:23989080..23989091,+ | ||
}} | }} |
Revision as of 09:06, 14 November 2012
Short description: | p@chr16:23989080..23989091, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:23989080..23989091, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.65e-13 | 8 |
regulatory T cell | 1.55e-12 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.55e-12 | 1 |
lining cell | 2.01e-12 | 1 |
meso-epithelial cell | 2.01e-12 | 1 |
endothelial cell | 2.01e-12 | 1 |
endothelial cell of sinusoid | 2.01e-12 | 1 |
endothelial cell of hepatic sinusoid | 2.01e-12 | 1 |
mature alpha-beta T cell | 1.10e-11 | 9 |
alpha-beta T cell | 1.10e-11 | 9 |
immature T cell | 1.10e-11 | 9 |
mature T cell | 1.10e-11 | 9 |
immature alpha-beta T cell | 1.10e-11 | 9 |
T cell | 1.11e-09 | 11 |
pro-T cell | 1.11e-09 | 11 |
lymphoid lineage restricted progenitor cell | 6.30e-09 | 12 |
lymphocyte | 2.75e-08 | 13 |
common lymphoid progenitor | 2.75e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.01e-12 | 1 |
hepatic sinusoid | 2.01e-12 | 1 |
parenchyma | 2.01e-12 | 1 |
abdomen blood vessel | 2.01e-12 | 1 |
sinusoid | 2.01e-12 | 1 |
digestive system duct | 2.01e-12 | 1 |
abdominal segment blood vessel | 2.01e-12 | 1 |
trunk blood vessel | 2.01e-12 | 1 |
liver parenchyma | 2.01e-12 | 1 |
liver lobule | 2.01e-12 | 1 |
biliary system | 2.01e-12 | 1 |
biliary tree | 2.01e-12 | 1 |
biliary bud | 2.01e-12 | 1 |
hepatic duct | 2.01e-12 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.