FFCP PHASE1:Hg19::chr8:42042654..42042665,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000183!2.20e-20!59;CL:0000680!5.57e-20!57;CL:0000056!5.57e-20!57;CL:0000355!5.57e-20!57;CL:0000192!2.57e-19!42;CL:0000514!2.57e-19!42;CL:0000187!2.30e-18!54;CL:0000393!1.14e-15!60;CL:0000211!1.14e-15!60;CL:0000055!1.15e-14!180;CL:0000359!6.08e-13!32;CL:0002539!2.50e-11!10;CL:0000222!5.40e-10!119;CL:0000220!1.04e-07!246;CL:0002321!1.54e-07!248 | |ontology_enrichment_celltype=CL:0000183!2.20e-20!59;CL:0000680!5.57e-20!57;CL:0000056!5.57e-20!57;CL:0000355!5.57e-20!57;CL:0000192!2.57e-19!42;CL:0000514!2.57e-19!42;CL:0000187!2.30e-18!54;CL:0000393!1.14e-15!60;CL:0000211!1.14e-15!60;CL:0000055!1.15e-14!180;CL:0000359!6.08e-13!32;CL:0002539!2.50e-11!10;CL:0000222!5.40e-10!119;CL:0000220!1.04e-07!246;CL:0002321!1.54e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.81e-24;32!CL:0002593;3.83e-21;2!CL:0000192;4.31e-20;43!CL:0002595;9.39e-19;5!CL:0002539;7.20e-16;10!CL:0002591;1.18e-11;1!CL:0002379;1.87e-11;1!CL:0002616;4.01e-11;1!CL:0000187;2.26e-10;55!CL:0000393;5.08e-08;61!CL:0000211;5.08e-08;61 | |ontology_enrichment_celltype_v019=CL:0000359;3.81e-24;32!CL:0002593;3.83e-21;2!CL:0000192;4.31e-20;43!CL:0002595;9.39e-19;5!CL:0002539;7.20e-16;10!CL:0002591;1.18e-11;1!CL:0002379;1.87e-11;1!CL:0002616;4.01e-11;1!CL:0000187;2.26e-10;55!CL:0000393;5.08e-08;61!CL:0000211;5.08e-08;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.52e-26,43;CL:0000514,3.52e-26,43;CL:0000359,5.94e-24,32;CL:0002593,4.25e-21,2;CL:0000187,3.94e-20,55;CL:0000680,5.23e-19,58;CL:0000056,5.23e-19,58;CL:0000355,5.23e-19,58;CL:0002595,9.12e-19,5;CL:0000393,5.38e-18,61;CL:0000211,5.38e-18,61;CL:0002539,8.75e-16,10;CL:0002591,1.06e-11,1;CL:0002379,1.97e-11,1;CL:0002616,2.96e-11,1;CL:0000222,2.90e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.31e-20;43!CL:0000355;1.07e-10;58!UBERON:0005795;6.68e-10;10 | |ontology_enrichment_development_v019=CL:0000514;4.31e-20;43!CL:0000355;1.07e-10;58!UBERON:0005795;6.68e-10;10 | ||
|ontology_enrichment_disease=DOID:0060084!3.77e-07!3;DOID:127!3.77e-07!3 | |ontology_enrichment_disease=DOID:0060084!3.77e-07!3;DOID:127!3.77e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.30e-31;3!DOID:127;1.30e-31;3!DOID:0060072;6.90e-24;4!DOID:3620;1.87e-11;1!DOID:3565;1.87e-11;1 | |ontology_enrichment_disease_v019=DOID:0060084;1.30e-31;3!DOID:127;1.30e-31;3!DOID:0060072;6.90e-24;4!DOID:3620;1.87e-11;1!DOID:3565;1.87e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.30e-31,3;DOID:127,1.30e-31,3;DOID:0060072,6.91e-24,4;DOID:3620,1.97e-11,1;DOID:3565,1.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.66e-18!61;UBERON:0002036!4.66e-18!61;UBERON:0003082!4.66e-18!61;UBERON:0002385!3.43e-17!63;UBERON:0001015!3.43e-17!63;UBERON:0000383!3.43e-17!63;UBERON:0004290!4.60e-17!70;UBERON:0000914!5.49e-15!83;UBERON:0002329!5.49e-15!83;UBERON:0003077!5.49e-15!83;UBERON:0003059!5.49e-15!83;UBERON:0007282!5.49e-15!83;UBERON:0009618!5.49e-15!83;UBERON:0007285!5.49e-15!83;UBERON:0000486!3.14e-14!82;UBERON:0005256!5.64e-14!143;UBERON:0001135!1.61e-13!15;UBERON:0001637!1.39e-12!42;UBERON:0003509!1.39e-12!42;UBERON:0004572!1.39e-12!42;UBERON:0004573!1.99e-12!33;UBERON:0004571!1.99e-12!33;UBERON:0000490!2.75e-12!138;UBERON:0004237!2.50e-11!10;UBERON:0004695!2.50e-11!10;UBERON:0002111!2.50e-11!10;UBERON:0004178!2.50e-11!10;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0002203!9.35e-10!6;UBERON:0001768!9.35e-10!6;UBERON:0000483!1.47e-09!309;UBERON:0000119!2.66e-09!312;UBERON:0004535!1.89e-08!110;UBERON:0003914!2.62e-08!118;UBERON:0004872!3.24e-08!84;UBERON:0001981!5.28e-08!60;UBERON:0007500!5.28e-08!60;UBERON:0004537!5.28e-08!60;UBERON:0006965!5.28e-08!60;UBERON:0001009!5.31e-08!113;UBERON:0000481!9.34e-08!347;UBERON:0000475!1.72e-07!365;UBERON:0002100!3.60e-07!216;UBERON:0000947!3.98e-07!21;UBERON:0010191!3.98e-07!21;UBERON:0000055!4.39e-07!69;UBERON:0000488!9.78e-07!4 | |ontology_enrichment_uberon=UBERON:0001134!4.66e-18!61;UBERON:0002036!4.66e-18!61;UBERON:0003082!4.66e-18!61;UBERON:0002385!3.43e-17!63;UBERON:0001015!3.43e-17!63;UBERON:0000383!3.43e-17!63;UBERON:0004290!4.60e-17!70;UBERON:0000914!5.49e-15!83;UBERON:0002329!5.49e-15!83;UBERON:0003077!5.49e-15!83;UBERON:0003059!5.49e-15!83;UBERON:0007282!5.49e-15!83;UBERON:0009618!5.49e-15!83;UBERON:0007285!5.49e-15!83;UBERON:0000486!3.14e-14!82;UBERON:0005256!5.64e-14!143;UBERON:0001135!1.61e-13!15;UBERON:0001637!1.39e-12!42;UBERON:0003509!1.39e-12!42;UBERON:0004572!1.39e-12!42;UBERON:0004573!1.99e-12!33;UBERON:0004571!1.99e-12!33;UBERON:0000490!2.75e-12!138;UBERON:0004237!2.50e-11!10;UBERON:0004695!2.50e-11!10;UBERON:0002111!2.50e-11!10;UBERON:0004178!2.50e-11!10;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0002203!9.35e-10!6;UBERON:0001768!9.35e-10!6;UBERON:0000483!1.47e-09!309;UBERON:0000119!2.66e-09!312;UBERON:0004535!1.89e-08!110;UBERON:0003914!2.62e-08!118;UBERON:0004872!3.24e-08!84;UBERON:0001981!5.28e-08!60;UBERON:0007500!5.28e-08!60;UBERON:0004537!5.28e-08!60;UBERON:0006965!5.28e-08!60;UBERON:0001009!5.31e-08!113;UBERON:0000481!9.34e-08!347;UBERON:0000475!1.72e-07!365;UBERON:0002100!3.60e-07!216;UBERON:0000947!3.98e-07!21;UBERON:0010191!3.98e-07!21;UBERON:0000055!4.39e-07!69;UBERON:0000488!9.78e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.83e-21;2!UBERON:0004573;2.12e-20;33!UBERON:0004571;2.12e-20;33!UBERON:0003834;9.39e-19;5!UBERON:0001533;9.39e-19;5!UBERON:0001637;7.35e-17;42!UBERON:0003509;7.35e-17;42!UBERON:0004572;7.35e-17;42!UBERON:0001135;3.47e-16;15!UBERON:0004237;7.20e-16;10!UBERON:0004695;7.20e-16;10!UBERON:0002111;7.20e-16;10!UBERON:0004178;7.20e-16;10!UBERON:0003513;1.43e-13;7!UBERON:0000947;1.28e-11;21!UBERON:0010191;1.28e-11;21!UBERON:0007500;6.80e-09;56!UBERON:0001981;6.80e-09;56!UBERON:0004537;6.80e-09;56!UBERON:0003914;1.36e-08;74!UBERON:0002385;8.78e-08;31!UBERON:0001015;8.78e-08;31!UBERON:0000383;8.78e-08;31!UBERON:0000055;2.90e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0002456;3.83e-21;2!UBERON:0004573;2.12e-20;33!UBERON:0004571;2.12e-20;33!UBERON:0003834;9.39e-19;5!UBERON:0001533;9.39e-19;5!UBERON:0001637;7.35e-17;42!UBERON:0003509;7.35e-17;42!UBERON:0004572;7.35e-17;42!UBERON:0001135;3.47e-16;15!UBERON:0004237;7.20e-16;10!UBERON:0004695;7.20e-16;10!UBERON:0002111;7.20e-16;10!UBERON:0004178;7.20e-16;10!UBERON:0003513;1.43e-13;7!UBERON:0000947;1.28e-11;21!UBERON:0010191;1.28e-11;21!UBERON:0007500;6.80e-09;56!UBERON:0001981;6.80e-09;56!UBERON:0004537;6.80e-09;56!UBERON:0003914;1.36e-08;74!UBERON:0002385;8.78e-08;31!UBERON:0001015;8.78e-08;31!UBERON:0000383;8.78e-08;31!UBERON:0000055;2.90e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.70e-23,33;UBERON:0004571,3.70e-23,33;UBERON:0001637,2.76e-22,42;UBERON:0003509,2.76e-22,42;UBERON:0004572,2.76e-22,42;UBERON:0002456,4.25e-21,2;UBERON:0003834,9.12e-19,5;UBERON:0001533,9.12e-19,5;UBERON:0002329,3.24e-18,71;UBERON:0003059,3.24e-18,71;UBERON:0007282,3.24e-18,71;UBERON:0004290,3.24e-18,71;UBERON:0009618,3.24e-18,71;UBERON:0003077,6.15e-18,72;UBERON:0007285,6.15e-18,72;UBERON:0001134,1.11e-17,62;UBERON:0002036,1.11e-17,62;UBERON:0003082,1.11e-17,62;UBERON:0007524,1.14e-17,73;UBERON:0002385,4.46e-17,64;UBERON:0001015,4.46e-17,64;UBERON:0000383,4.46e-17,64;UBERON:0007503,2.02e-16,78;UBERON:0001135,3.95e-16,15;UBERON:0004237,8.75e-16,10;UBERON:0004695,8.75e-16,10;UBERON:0002111,8.75e-16,10;UBERON:0004178,8.75e-16,10;UBERON:0007500,1.81e-15,59;UBERON:0001981,1.81e-15,59;UBERON:0004537,1.81e-15,59;UBERON:0006965,1.81e-15,59;UBERON:0000486,2.53e-15,83;UBERON:0003513,1.40e-13,7;UBERON:0000055,3.09e-13,68;UBERON:0000947,1.36e-11,21;UBERON:0010191,1.36e-11,21;UBERON:0002049,2.34e-11,78;UBERON:0007798,2.34e-11,78;UBERON:0004872,1.38e-10,83;UBERON:0005256,7.69e-10,122;UBERON:0003498,3.53e-09,5;UBERON:0005985,3.53e-09,5;UBERON:0000490,8.73e-08,148;UBERON:0004535,1.02e-07,109;UBERON:0001009,1.79e-07,112;UBERON:0003914,4.31e-07,117;UBERON:0003104,4.62e-07,160;UBERON:0009142,4.62e-07,160 | |||
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| ||
|short_description=p9@PLAT | |short_description=p9@PLAT | ||
}} | }} |
Revision as of 16:22, 15 November 2012
Short description: | p9@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | -23bp_to_ENST00000524261_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.52e-26 | 43 |
smooth muscle myoblast | 3.52e-26 | 43 |
vascular associated smooth muscle cell | 5.94e-24 | 32 |
smooth muscle cell of the internal thoracic artery | 4.25e-21 | 2 |
muscle cell | 3.94e-20 | 55 |
muscle precursor cell | 5.23e-19 | 58 |
myoblast | 5.23e-19 | 58 |
multi-potent skeletal muscle stem cell | 5.23e-19 | 58 |
smooth muscle cell of the subclavian artery | 9.12e-19 | 5 |
electrically responsive cell | 5.38e-18 | 61 |
electrically active cell | 5.38e-18 | 61 |
aortic smooth muscle cell | 8.75e-16 | 10 |
smooth muscle cell of the pulmonary artery | 1.06e-11 | 1 |
meningothelial cell | 1.97e-11 | 1 |
perirenal adipocyte cell | 2.96e-11 | 1 |
mesodermal cell | 2.90e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.30e-31 | 3 |
leiomyoma | 1.30e-31 | 3 |
benign neoplasm | 6.91e-24 | 4 |
central nervous system cancer | 1.97e-11 | 1 |
meningioma | 1.97e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.