FFCP PHASE1:Hg19::chr9:120466650..120466659,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!2.03e-35!76;CL:0002194!1.94e-32!63;CL:0000576!1.94e-32!63;CL:0000040!1.94e-32!63;CL:0000559!1.94e-32!63;CL:0002009!5.29e-31!65;CL:0002057!1.94e-30!42;CL:0000557!2.58e-29!71;CL:0000839!2.10e-28!70;CL:0000860!3.29e-27!45;CL:0000763!2.86e-22!112;CL:0000049!2.86e-22!112;CL:0000738!8.99e-16!140;CL:0002087!8.09e-15!119;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0002031!8.79e-12!124;CL:0000988!1.26e-11!182;CL:0000115!7.14e-10!35;CL:0002139!1.13e-09!24;CL:0002393!4.68e-07!9;CL:0002397!4.68e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.03e-35!76;CL:0002194!1.94e-32!63;CL:0000576!1.94e-32!63;CL:0000040!1.94e-32!63;CL:0000559!1.94e-32!63;CL:0002009!5.29e-31!65;CL:0002057!1.94e-30!42;CL:0000557!2.58e-29!71;CL:0000839!2.10e-28!70;CL:0000860!3.29e-27!45;CL:0000763!2.86e-22!112;CL:0000049!2.86e-22!112;CL:0000738!8.99e-16!140;CL:0002087!8.09e-15!119;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0002032!6.62e-12!165;CL:0000837!6.62e-12!165;CL:0002031!8.79e-12!124;CL:0000988!1.26e-11!182;CL:0000115!7.14e-10!35;CL:0002139!1.13e-09!24;CL:0002393!4.68e-07!9;CL:0002397!4.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-33;33!CL:0002057;3.70e-33;33!CL:0000473;1.96e-32;39!CL:0000234;1.96e-32;39!CL:0000576;4.27e-29;48!CL:0000766;3.58e-23;69!CL:0002139;8.78e-12;24!CL:0000763;1.05e-11;100!CL:0000115;1.47e-10;36!CL:0000094;9.01e-09;8!CL:0000081;2.52e-08;11!CL:0000071;1.43e-07;18!CL:0000738;4.42e-07;136!CL:0000235;4.46e-07;6!CL:0002393;4.49e-07;6!CL:0002397;4.49e-07;6!CL:0002087;5.52e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;3.70e-33;33!CL:0002057;3.70e-33;33!CL:0000473;1.96e-32;39!CL:0000234;1.96e-32;39!CL:0000576;4.27e-29;48!CL:0000766;3.58e-23;69!CL:0002139;8.78e-12;24!CL:0000763;1.05e-11;100!CL:0000115;1.47e-10;36!CL:0000094;9.01e-09;8!CL:0000081;2.52e-08;11!CL:0000071;1.43e-07;18!CL:0000738;4.42e-07;136!CL:0000235;4.46e-07;6!CL:0002393;4.49e-07;6!CL:0002397;4.49e-07;6!CL:0002087;5.52e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.45e-53,72;CL:0000473,9.53e-51,48;CL:0000234,9.53e-51,48;CL:0002194,9.84e-50,59;CL:0000576,9.84e-50,59;CL:0000040,9.84e-50,59;CL:0000559,9.84e-50,59;CL:0002009,2.47e-47,61;CL:0000860,6.71e-45,42;CL:0002057,6.71e-45,42;CL:0000557,3.99e-44,67;CL:0000839,1.03e-43,66;CL:0000763,8.87e-35,108;CL:0000049,8.87e-35,108;CL:0000738,2.45e-25,136;CL:0002087,5.60e-24,115;CL:0000037,1.85e-20,168;CL:0002032,5.10e-20,161;CL:0000837,5.10e-20,161;CL:0002031,2.84e-19,120;CL:0000988,3.04e-19,177;CL:0000115,3.69e-13,36;CL:0002139,3.13e-12,24;CL:0002393,8.50e-10,9;CL:0002397,8.50e-10,9;CL:0002078,8.33e-09,45;CL:0000094,9.19e-09,8;CL:0000081,3.14e-08,11;CL:0000071,6.35e-08,18;CL:0002546,6.35e-08,18;CL:0000235,4.24e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-32;42!CL:0000049;1.00e-10;108!CL:0002546;1.43e-07;18 | |ontology_enrichment_development_v019=CL:0002057;2.92e-32;42!CL:0000049;1.00e-10;108!CL:0002546;1.43e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.25e-32!112;UBERON:0002390!3.47e-30!102;UBERON:0003061!3.47e-30!102;UBERON:0002371!2.90e-27!80;UBERON:0003081!9.10e-27!216;UBERON:0001474!9.36e-25!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!5.34e-18!101;UBERON:0001434!5.34e-18!101;UBERON:0007023!6.73e-14!115;UBERON:0001009!5.05e-13!113;UBERON:0004535!1.59e-12!110;UBERON:0002204!1.76e-11!167;UBERON:0002049!3.59e-08!79;UBERON:0007798!3.59e-08!79;UBERON:0000055!3.53e-07!69;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448;UBERON:0004872!8.67e-07!84 | |ontology_enrichment_uberon=UBERON:0002193!1.25e-32!112;UBERON:0002390!3.47e-30!102;UBERON:0003061!3.47e-30!102;UBERON:0002371!2.90e-27!80;UBERON:0003081!9.10e-27!216;UBERON:0001474!9.36e-25!86;UBERON:0002405!1.13e-22!115;UBERON:0004765!5.34e-18!101;UBERON:0001434!5.34e-18!101;UBERON:0007023!6.73e-14!115;UBERON:0001009!5.05e-13!113;UBERON:0004535!1.59e-12!110;UBERON:0002204!1.76e-11!167;UBERON:0002049!3.59e-08!79;UBERON:0007798!3.59e-08!79;UBERON:0000055!3.53e-07!69;UBERON:0000926!7.73e-07!448;UBERON:0004120!7.73e-07!448;UBERON:0006603!7.73e-07!448;UBERON:0004872!8.67e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.43e-07;18!UBERON:0001986;1.43e-07;18!UBERON:0004852;1.43e-07;18!UBERON:0000178;1.88e-07;15!UBERON:0000179;1.88e-07;15!UBERON:0000463;1.88e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004638;1.43e-07;18!UBERON:0001986;1.43e-07;18!UBERON:0004852;1.43e-07;18!UBERON:0000178;1.88e-07;15!UBERON:0000179;1.88e-07;15!UBERON:0000463;1.88e-07;15 | ||
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|phase1_expression=1.09007027562334,1.92690471501885,1.55049844505568,2.00146596706261,1.34088328328186,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,1.80808358407193,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.57470412614962,0,2.36018566109342,4.98978217526377,6.34746105595912,0,0,0,1.85921281392724,0.142169232487422,0.587200878669695,9.41792194504192,15.0408335602606,7.37836960433896,11.867520134716,11.3362783106643,18.2878653020272,17.7385851311069,15.1150377475524,19.6493089562131,21.8483294691344,15.6243797448294,17.6532631410209,23.3030837780942,22.79830288109,23.6482229888585,19.9952494827239,10.3277549373412,12.1883837934908,13.5534484470675,11.4620583024295,15.0564734578207,24.4867113896722,20.8603867599461,26.8521592835597,33.644832619045,18.1511928435685,22.5899117782328,59.7831031574883,59.5754485925697,56.6768246585973,21.3561365468232,17.2089363078666,17.3751075764093,34.507771650102,49.3492032223337,63.6089398756178,9.29523259772544,7.86635909870661,7.33805259279316,10.671219958917,14.2668048199431,14.1438516293431,8.83539505597871,10.3436672143527,9.1332076882317,0,0.546138611262131,1.77901850772711,5.12076267079809,1.20118796110804,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0.764546456250458,0,2.80254281490768,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0,0.378139268656271,1.33037638477538,1.40535657109002,0.785874452986276,0,0,4.54366351116557,3.48259474598534,3.32394901297163,0.953962497221368,0.571994910780128,0,1.59009925893364,1.72046919021225,0.694281003215189,2.82653970962005,1.25849830862972,3.85165258716094,1.8809546988313,4.13466814670926,8.53839030448104,3.3472061276467,2.01414658554573,2.28081631715554,5.12530320851156,1.83831540172934,0.81014194788176,2.41109266367015,2.46982309888787,2.13961812918312,0,1.89853131913626,1.09921046358244,17.1314542666882,3.87780264148325,0,1.98788780678127,2.65924074495618,0.397227542439656,1.43418310374407,0,1.12135520028461,0,0.24666754841716,1.55605517699883,1.48181739276657,2.12500474047496,0.908144565869588,1.72852777344,0,1.24864030732128,0,0.298897361103602,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,1.36118619792025,0,0,0,0.300091096084402,0.103052529238439,0,0.37223371266318,0,0,0,0,0.484938170456436,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,0,0,0,0,0.325808305310325,0,1.44331342025273,0.34779121492523,1.17408694235822,2.88732895522148,2.77791307545966,5.51737041480335,0,0,11.8184162921951,3.97807250736704,7.72882043901387,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,2.46535615237033,0,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.571652865261156,3.1396703616701,2.1798003441664,6.38043086642265,0.129271715757778,0,0,1.06375246633948,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,0,9.72990245129524,23.6060832973099,8.43335757932127,1.4377491329495,1.14861935834114,0,1.44781306667579,0.821905290201534,0.358121926479791,0,0.197030760201927,0,0,0.76228387266739,0,0,0.335032530668698,0,22.4702107184155,11.966458368161,43.5136289107837,0.24538298343828,1.00034104211935,0.813795071099207,0.831883446123229,0.178428988797162,0.630809660135739,1.05427273493442,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,4.34212854858063,5.1771408196468,1.921096040462,0,0,0,1.48864684691266,1.07423381301644,1.12264037773229,1.28139149255701,1.02341449813341,0.804269605718038,0,0.308419387605311,0.177561725313127,0.410635780069046,1.03850885836724,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0.308061348417659,0,0,0.422206515571503,2.27466768141793,1.02056223165909,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,1.75169719801128,0.0915694648183434,0.247528499761764,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.765676274967505,0,0,0,0.6970372701606,0.308033580176089,3.72614221221915,1.73986598415015,0.9266210955196,3.43499728180779,0.744316738719335,0,0.762520775695299,0,0,0,0.78494864019923,0.179872457583315,0,0,1.01091240786658,0,0.421258456238981,0,5.36169677188826,0,0.136499911407986,0,0,0.551365343546124,1.99031692572366,6.57676327880644,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0,0,0,1.97701981631236,0,0,0,0.459446800413919,3.55213326462519,9.94028369285088,6.26611905891579,5.002867284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| ||
|short_description=p6@TLR4 | |short_description=p6@TLR4 | ||
}} | }} |
Revision as of 05:25, 16 November 2012
Short description: | p6@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TLR4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000355622_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | O00206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.16e-47 | 108 |
hematopoietic system | 1.53e-43 | 98 |
blood island | 1.53e-43 | 98 |
lateral plate mesoderm | 3.17e-42 | 203 |
immune system | 7.57e-40 | 93 |
bone marrow | 8.51e-39 | 76 |
bone element | 2.14e-35 | 82 |
skeletal element | 4.70e-31 | 90 |
skeletal system | 1.31e-25 | 100 |
mesoderm | 1.15e-22 | 315 |
mesoderm-derived structure | 1.15e-22 | 315 |
presumptive mesoderm | 1.15e-22 | 315 |
musculoskeletal system | 7.26e-14 | 167 |
cardiovascular system | 1.13e-13 | 109 |
circulatory system | 1.58e-13 | 112 |
blood vessel endothelium | 6.35e-08 | 18 |
endothelium | 6.35e-08 | 18 |
cardiovascular system endothelium | 6.35e-08 | 18 |
vessel | 7.51e-08 | 68 |
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |
vasculature | 1.33e-07 | 78 |
vascular system | 1.33e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 3.75e-07 | 83 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.