FFCP PHASE1:Hg19::chr5:151047146..151047178,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.11e-27!180;CL:0000222!3.58e-16!119;CL:0000057!2.48e-15!75;CL:0000183!2.51e-11!59;CL:0000680!5.89e-11!57;CL:0000056!5.89e-11!57;CL:0000355!5.89e-11!57;CL:0000187!1.58e-10!54;CL:0000136!1.92e-10!15;CL:0000192!1.91e-09!42;CL:0000514!1.91e-09!42;CL:0000393!4.70e-09!60;CL:0000211!4.70e-09!60;CL:0000220!2.42e-07!246;CL:0002321!3.28e-07!248;CL:0000213!3.57e-07!57;CL:0000215!3.57e-07!57;CL:0000359!6.35e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.11e-27!180;CL:0000222!3.58e-16!119;CL:0000057!2.48e-15!75;CL:0000183!2.51e-11!59;CL:0000680!5.89e-11!57;CL:0000056!5.89e-11!57;CL:0000355!5.89e-11!57;CL:0000187!1.58e-10!54;CL:0000136!1.92e-10!15;CL:0000192!1.91e-09!42;CL:0000514!1.91e-09!42;CL:0000393!4.70e-09!60;CL:0000211!4.70e-09!60;CL:0000220!2.42e-07!246;CL:0002321!3.28e-07!248;CL:0000213!3.57e-07!57;CL:0000215!3.57e-07!57;CL:0000359!6.35e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.57e-10;13!CL:0000134;7.15e-09;55!CL:0000048;2.60e-08;58!CL:0000723;3.85e-08;61!CL:0000349;8.03e-08;19!CL:0002334;3.32e-07;12!CL:0000192;3.34e-07;43 | |ontology_enrichment_celltype_v019=CL:0000136;3.57e-10;13!CL:0000134;7.15e-09;55!CL:0000048;2.60e-08;58!CL:0000723;3.85e-08;61!CL:0000349;8.03e-08;19!CL:0002334;3.32e-07;12!CL:0000192;3.34e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-17,121;CL:0000057,1.06e-14,76;CL:0000680,1.57e-11,58;CL:0000056,1.57e-11,58;CL:0000355,1.57e-11,58;CL:0000136,2.13e-11,15;CL:0000187,4.71e-11,55;CL:0000192,6.65e-10,43;CL:0000514,6.65e-10,43;CL:0000393,8.07e-09,61;CL:0000211,8.07e-09,61;CL:0000213,4.01e-08,58;CL:0000215,4.01e-08,58;CL:0000349,7.71e-08,19;CL:0002334,2.89e-07,12;CL:0000359,6.02e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.34e-07;43 | |ontology_enrichment_development_v019=CL:0000514;3.34e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.06e-17!84;UBERON:0000914!3.71e-13!83;UBERON:0002329!3.71e-13!83;UBERON:0003077!3.71e-13!83;UBERON:0003059!3.71e-13!83;UBERON:0007282!3.71e-13!83;UBERON:0009618!3.71e-13!83;UBERON:0007285!3.71e-13!83;UBERON:0002049!4.69e-13!79;UBERON:0007798!4.69e-13!79;UBERON:0004535!1.31e-12!110;UBERON:0001009!2.19e-12!113;UBERON:0004290!3.17e-12!70;UBERON:0001134!6.96e-12!61;UBERON:0002036!6.96e-12!61;UBERON:0003082!6.96e-12!61;UBERON:0002385!9.92e-12!63;UBERON:0001015!9.92e-12!63;UBERON:0000383!9.92e-12!63;UBERON:0000055!1.23e-11!69;UBERON:0001981!3.16e-11!60;UBERON:0007500!3.16e-11!60;UBERON:0004537!3.16e-11!60;UBERON:0006965!3.16e-11!60;UBERON:0005256!4.82e-11!143;UBERON:0000486!4.42e-10!82;UBERON:0000475!4.54e-10!365;UBERON:0000490!1.93e-09!138;UBERON:0001637!2.37e-09!42;UBERON:0003509!2.37e-09!42;UBERON:0004572!2.37e-09!42;UBERON:0003914!3.67e-09!118;UBERON:0000468!1.20e-08!659;UBERON:0002100!2.30e-08!216;UBERON:0001013!3.84e-08!14;UBERON:0003102!1.05e-07!95;UBERON:0004573!2.21e-07!33;UBERON:0004571!2.21e-07!33;UBERON:0004923!3.51e-07!57;UBERON:0000478!4.38e-07!24;UBERON:0005631!5.50e-07!14;UBERON:0000158!5.50e-07!14 | |ontology_enrichment_uberon=UBERON:0004872!5.06e-17!84;UBERON:0000914!3.71e-13!83;UBERON:0002329!3.71e-13!83;UBERON:0003077!3.71e-13!83;UBERON:0003059!3.71e-13!83;UBERON:0007282!3.71e-13!83;UBERON:0009618!3.71e-13!83;UBERON:0007285!3.71e-13!83;UBERON:0002049!4.69e-13!79;UBERON:0007798!4.69e-13!79;UBERON:0004535!1.31e-12!110;UBERON:0001009!2.19e-12!113;UBERON:0004290!3.17e-12!70;UBERON:0001134!6.96e-12!61;UBERON:0002036!6.96e-12!61;UBERON:0003082!6.96e-12!61;UBERON:0002385!9.92e-12!63;UBERON:0001015!9.92e-12!63;UBERON:0000383!9.92e-12!63;UBERON:0000055!1.23e-11!69;UBERON:0001981!3.16e-11!60;UBERON:0007500!3.16e-11!60;UBERON:0004537!3.16e-11!60;UBERON:0006965!3.16e-11!60;UBERON:0005256!4.82e-11!143;UBERON:0000486!4.42e-10!82;UBERON:0000475!4.54e-10!365;UBERON:0000490!1.93e-09!138;UBERON:0001637!2.37e-09!42;UBERON:0003509!2.37e-09!42;UBERON:0004572!2.37e-09!42;UBERON:0003914!3.67e-09!118;UBERON:0000468!1.20e-08!659;UBERON:0002100!2.30e-08!216;UBERON:0001013!3.84e-08!14;UBERON:0003102!1.05e-07!95;UBERON:0004573!2.21e-07!33;UBERON:0004571!2.21e-07!33;UBERON:0004923!3.51e-07!57;UBERON:0000478!4.38e-07!24;UBERON:0005631!5.50e-07!14;UBERON:0000158!5.50e-07!14 | ||
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| ||
|short_description=p4@SPARC | |short_description=p4@SPARC | ||
}} | }} |
Revision as of 23:58, 16 November 2012
Short description: | p4@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SPARC_5end |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | -1bp_to_ENST00000537849_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.85e-17 | 121 |
fibroblast | 1.06e-14 | 76 |
muscle precursor cell | 1.57e-11 | 58 |
myoblast | 1.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-11 | 58 |
fat cell | 2.13e-11 | 15 |
muscle cell | 4.71e-11 | 55 |
smooth muscle cell | 6.65e-10 | 43 |
smooth muscle myoblast | 6.65e-10 | 43 |
electrically responsive cell | 8.07e-09 | 61 |
electrically active cell | 8.07e-09 | 61 |
lining cell | 4.01e-08 | 58 |
barrier cell | 4.01e-08 | 58 |
extraembryonic cell | 7.71e-08 | 19 |
preadipocyte | 2.89e-07 | 12 |
vascular associated smooth muscle cell | 6.02e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.