FFCP PHASE1:Hg19::chr5:159739532..159739590,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.45e-35!254;CL:0002321!9.32e-21!248;CL:0000220!4.87e-20!246;CL:0000076!5.51e-10!62;CL:0002076!8.21e-10!43;CL:0000223!9.53e-10!59;CL:0000221!2.16e-08!71;CL:1000497!3.31e-08!18;CL:0002518!3.31e-08!18;CL:0000115!5.27e-08!35;CL:0002078!5.71e-08!44;CL:1000449!1.14e-07!16;CL:0002139!3.60e-07!24;CL:0000213!4.44e-07!57;CL:0000215!4.44e-07!57;CL:0002368!9.75e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.45e-35!254;CL:0002321!9.32e-21!248;CL:0000220!4.87e-20!246;CL:0000076!5.51e-10!62;CL:0002076!8.21e-10!43;CL:0000223!9.53e-10!59;CL:0000221!2.16e-08!71;CL:1000497!3.31e-08!18;CL:0002518!3.31e-08!18;CL:0000115!5.27e-08!35;CL:0002078!5.71e-08!44;CL:1000449!1.14e-07!16;CL:0002139!3.60e-07!24;CL:0000213!4.44e-07!57;CL:0000215!4.44e-07!57;CL:0002368!9.75e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.95e-10;17!CL:0002518;5.95e-10;17!CL:1000449;1.90e-09;15!CL:0002076;3.56e-09;42!CL:0002681;1.18e-07;12!CL:0002584;1.18e-07;12!CL:0000115;1.42e-07;36!CL:0002139;3.90e-07;24!CL:0002368;8.27e-07;13!CL:1000507;8.61e-07;10!CL:1000494;8.61e-07;10 | |ontology_enrichment_celltype_v019=CL:1000497;5.95e-10;17!CL:0002518;5.95e-10;17!CL:1000449;1.90e-09;15!CL:0002076;3.56e-09;42!CL:0002681;1.18e-07;12!CL:0002584;1.18e-07;12!CL:0000115;1.42e-07;36!CL:0002139;3.90e-07;24!CL:0002368;8.27e-07;13!CL:1000507;8.61e-07;10!CL:1000494;8.61e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.73e-36,253;CL:0002321,2.42e-21,250;CL:0002076,2.00e-11,42;CL:0000223,2.70e-11,58;CL:1000497,5.80e-10,17;CL:0002518,5.80e-10,17;CL:0000076,8.37e-10,63;CL:1000449,1.98e-09,15;CL:0002078,4.40e-09,45;CL:0000115,5.12e-09,36;CL:0000213,7.28e-08,58;CL:0000215,7.28e-08,58;CL:0000221,8.21e-08,72;CL:0002681,1.24e-07,12;CL:0002584,1.24e-07,12;CL:0002139,3.14e-07,24;CL:0002368,8.73e-07,13;CL:1000507,8.90e-07,10;CL:1000494,8.90e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;6.16e-07;58 | |ontology_enrichment_development_v019=CL:0000223;6.16e-07;58 | ||
|ontology_enrichment_disease=DOID:305!2.04e-09!106;DOID:0050687!3.46e-08!143 | |ontology_enrichment_disease=DOID:305!2.04e-09!106;DOID:0050687!3.46e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.18e-08,106;DOID:0050687,2.98e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.22e-12!312;UBERON:0000483!5.82e-12!309;UBERON:0000477!4.80e-11!286;UBERON:0001048!5.45e-11!168;UBERON:0004111!1.13e-10!241;UBERON:0000481!1.22e-10!347;UBERON:0000922!6.97e-10!612;UBERON:0000466!8.16e-10!126;UBERON:0000025!1.02e-09!194;UBERON:0005177!2.35e-09!107;UBERON:0004119!3.09e-09!169;UBERON:0000925!3.09e-09!169;UBERON:0006595!3.09e-09!169;UBERON:0000464!3.47e-09!104;UBERON:0000467!2.36e-08!625;UBERON:0005911!2.40e-08!82;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000468!2.71e-08!659;UBERON:0000923!3.55e-08!604;UBERON:0005291!3.55e-08!604;UBERON:0006598!3.55e-08!604;UBERON:0002532!3.55e-08!604;UBERON:0000480!3.87e-08!626;UBERON:0004211!1.14e-07!16;UBERON:0001285!1.14e-07!16;UBERON:0007684!1.14e-07!16;UBERON:0003220!1.14e-07!16;UBERON:0004208!1.14e-07!16;UBERON:0001008!1.30e-07!45;UBERON:0003914!1.73e-07!118;UBERON:0001007!1.74e-07!155;UBERON:0001555!1.74e-07!155;UBERON:0007026!1.74e-07!155;UBERON:0001009!1.98e-07!113;UBERON:0006554!2.06e-07!44;UBERON:0006555!2.50e-07!17;UBERON:0005103!2.50e-07!17;UBERON:0000083!2.50e-07!17;UBERON:0009201!2.50e-07!17;UBERON:0004819!2.50e-07!17;UBERON:0006553!2.50e-07!17;UBERON:0003074!2.50e-07!17;UBERON:0003060!2.50e-07!17;UBERON:0000080!3.50e-07!18;UBERON:0002120!3.50e-07!18;UBERON:0004875!3.50e-07!18;UBERON:0005721!3.50e-07!18;UBERON:0005754!3.50e-07!18;UBERON:0007297!3.50e-07!18;UBERON:0000058!3.77e-07!26;UBERON:0002113!6.25e-07!27;UBERON:0003918!6.25e-07!27;UBERON:0005095!6.25e-07!27;UBERON:0007687!6.25e-07!27;UBERON:0004535!7.29e-07!110;UBERON:0003887!8.11e-07!21 | |ontology_enrichment_uberon=UBERON:0000119!1.22e-12!312;UBERON:0000483!5.82e-12!309;UBERON:0000477!4.80e-11!286;UBERON:0001048!5.45e-11!168;UBERON:0004111!1.13e-10!241;UBERON:0000481!1.22e-10!347;UBERON:0000922!6.97e-10!612;UBERON:0000466!8.16e-10!126;UBERON:0000025!1.02e-09!194;UBERON:0005177!2.35e-09!107;UBERON:0004119!3.09e-09!169;UBERON:0000925!3.09e-09!169;UBERON:0006595!3.09e-09!169;UBERON:0000464!3.47e-09!104;UBERON:0000467!2.36e-08!625;UBERON:0005911!2.40e-08!82;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000468!2.71e-08!659;UBERON:0000923!3.55e-08!604;UBERON:0005291!3.55e-08!604;UBERON:0006598!3.55e-08!604;UBERON:0002532!3.55e-08!604;UBERON:0000480!3.87e-08!626;UBERON:0004211!1.14e-07!16;UBERON:0001285!1.14e-07!16;UBERON:0007684!1.14e-07!16;UBERON:0003220!1.14e-07!16;UBERON:0004208!1.14e-07!16;UBERON:0001008!1.30e-07!45;UBERON:0003914!1.73e-07!118;UBERON:0001007!1.74e-07!155;UBERON:0001555!1.74e-07!155;UBERON:0007026!1.74e-07!155;UBERON:0001009!1.98e-07!113;UBERON:0006554!2.06e-07!44;UBERON:0006555!2.50e-07!17;UBERON:0005103!2.50e-07!17;UBERON:0000083!2.50e-07!17;UBERON:0009201!2.50e-07!17;UBERON:0004819!2.50e-07!17;UBERON:0006553!2.50e-07!17;UBERON:0003074!2.50e-07!17;UBERON:0003060!2.50e-07!17;UBERON:0000080!3.50e-07!18;UBERON:0002120!3.50e-07!18;UBERON:0004875!3.50e-07!18;UBERON:0005721!3.50e-07!18;UBERON:0005754!3.50e-07!18;UBERON:0007297!3.50e-07!18;UBERON:0000058!3.77e-07!26;UBERON:0002113!6.25e-07!27;UBERON:0003918!6.25e-07!27;UBERON:0005095!6.25e-07!27;UBERON:0007687!6.25e-07!27;UBERON:0004535!7.29e-07!110;UBERON:0003887!8.11e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.00e-10;30!UBERON:0001008;2.00e-10;30!UBERON:0006555;1.90e-09;15!UBERON:0004819;1.90e-09;15!UBERON:0001285;1.90e-09;15!UBERON:0007684;1.90e-09;15!UBERON:0000353;3.55e-08;15!UBERON:0005911;3.61e-08;36!UBERON:0000490;3.77e-08;33!UBERON:0002113;5.49e-08;24!UBERON:0011143;5.49e-08;24!UBERON:0001225;1.18e-07;12!UBERON:0008987;1.18e-07;12!UBERON:0000489;3.48e-07;29!UBERON:0004211;8.61e-07;10!UBERON:0009773;8.61e-07;10!UBERON:0001231;8.61e-07;10!UBERON:0004810;8.61e-07;10!UBERON:0001851;9.60e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006554;2.00e-10;30!UBERON:0001008;2.00e-10;30!UBERON:0006555;1.90e-09;15!UBERON:0004819;1.90e-09;15!UBERON:0001285;1.90e-09;15!UBERON:0007684;1.90e-09;15!UBERON:0000353;3.55e-08;15!UBERON:0005911;3.61e-08;36!UBERON:0000490;3.77e-08;33!UBERON:0002113;5.49e-08;24!UBERON:0011143;5.49e-08;24!UBERON:0001225;1.18e-07;12!UBERON:0008987;1.18e-07;12!UBERON:0000489;3.48e-07;29!UBERON:0004211;8.61e-07;10!UBERON:0009773;8.61e-07;10!UBERON:0001231;8.61e-07;10!UBERON:0004810;8.61e-07;10!UBERON:0001851;9.60e-07;15 | ||
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|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,8.3549538410513,24.423040879035,0.655324116390517,0.527533956456907,0.37129905888014,0,1.34465029290355,1.20538905604795,3.65155045193687,5.36726078669558,4.67860020691794,4.28401451612931,3.76145665773705,5.15224776835902,8.48621435451882,5.77496142136093,0.382067028739756,0.164201178899891,0.157421562627358,0.393364276848904,1.91914699048606,2.32224184974114,7.35536979583142,12.6506485886865,12.201882335504,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0.659702600373432,0,0.852449501065388,0.870627715885752,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,2.49861453104692,0.710331756132051,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,0.722878304769133,0,0.144846518960824,0,0,5.2939497611878,5.5432349365641,6.49977414129133,6.87640146362991,7.65020105414339,2.22470665670658,0,0,0,0,0,0,5.56534740626774,2.58070378531837,7.63709103536707,5.6530794192401,9.64848703282784,6.05259692268148,5.43386912995707,10.3366703667732,11.3845204059747,12.7193832850575,7.25092770796465,2.28081631715554,9.76248230192678,6.25027236587977,14.5825550618717,5.98308179503334,6.28682243353275,5.40535106319947,7.66583187329416,7.59412527654503,6.59526278149466,52.7121669744253,54.2892369807656,15.6993858771312,0,0.633152558322899,0.926864265692532,0,0.709336764396714,2.24271040056923,4.2699598291882,6.66002380726332,1.55605517699883,2.02066008104532,1.63461903113459,3.78393569112329,1.72852777344,1.64025002283658,0,1.1409436430889,0,0.23486899728753,0,0.702254033511242,0,3.0708579327942,0.206651562351531,1.18800285728205,1.7308685049499,0,0.718618141816238,1.85169725349473,2.37725187756732,0.554128230968366,0.438977620880838,1.83892677479412,1.95309476578576,2.1552114800404,1.25572744982203,1.06778694409284,0,0.300091096084402,0.103052529238439,0.515281080091258,0.558350568994769,0.168776332241266,0.292311015483596,0,0,0.80823028409406,0.710019185033229,1.10827308050404,1.52604533079439,9.46978180500154,13.0918137883601,9.46455164783713,8.53815942907168,11.1325005390048,9.76029120103954,10.4697665565524,10.849796587652,6.20461510428911,1.56449532329816,0,1.38134921352481,0,0,1.41968160047813,0.842923450390509,0.964044119533928,1.54411561825352,1.52515610864684,0.71181185733329,1.07865046528132,0.784885860501384,0.38474715694639,15.5012645471176,7.01208869017229,2.4694440679884,0,0,0,1.18157981336281,0.441463099414651,13.5287282397425,5.66173773985134,9.4385245451418,13.4882103909143,0.100528972411631,8.33296006426766,0.977424915930974,0,17.3197610430328,7.30361551342984,6.10525210026273,3.75352764178792,0.925971025153221,2.47330397904978,3.1608175918371,5.15091697256924,0,0,0,10.3107217385455,4.36753533317035,3.68615252830205,1.70161193135412,3.48760726216754,7.28427090413901,0,0,0.207328115540772,0.720599767084807,0.12624243342638,3.11139682031628,9.54971063895694,7.03304683260282,5.13217338068116,2.05654985406647,1.50171528921959,4.85904935471983,9.30688000066494,9.15516144549888,4.32695886343605,3.74887975697556,0,0,3.72313363218819,1.04007436911366,1.54324424557285,2.83698264046557,2.39779961114489,0.285955987316295,1.08524321078289,2.46972101034231,0,0,0,2.1100756394171,2.61460037580088,3.89894665610022,0,0,0,1.67737398844108,0,4.27910715122155,0.434343920002738,1.02738161275192,0.537182889719687,0,1.77327684181734,1.07813787429759,1.02674429023799,9.65559572045361,6.50699269288109,1.54657762555539,2.51274398001523,3.18969375826582,75.6497094186654,65.8155210248855,118.522836842706,0.736148950314839,0,0.542530047399471,1.87173775377726,0.892144943985809,0.473107245101804,0.234282829985426,0.601892199455438,0,1.03473071292505,0.664225598535437,2.02806085395873,0,6.2656370388077,3.0882908142977,0.620304078368662,2.15714200818617,0.320182673410333,0,0,0.907170879989041,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,10.1521937656963,13.6344399806234,7.64272208167939,0.114814448164607,0,0,14.8895872259446,7.93257972175472,16.471345152714,17.5367069583913,11.5051275493235,18.1973414513435,11.3962782535265,5.61381381865562,15.4227252690289,9.212178876491,9.03041592938736,9.43042210266642,15.7904441696458,14.3279843022194,0,0,4.10320200186223,4.26419039409617,0.976135183992909,1.854738209659,14.6511143709349,13.2015199872941,36.1787288937589,14.95138565884,0,1.54673149267395,0.154048617114644,0.307007349452259,0.275673144969061,0,0.145016693914229,0.852266274161009,1.33548053470106,11.7352289906294,19.7955769386059,15.0583000743609,23.4686051584876,0,0.31481234683064,0.6970372701606,0,2.12922412126809,0,2.40921484835096,1.00187420719394,3.72158369359667,2.21465597303108,1.14378116354295,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| ||
|short_description=p1@CCNJL | |short_description=p1@CCNJL | ||
}} | }} |
Revision as of 04:50, 17 November 2012
Short description: | p1@CCNJL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCNJL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520748, NM_024565, uc003lyb.1, uc011dee.1, uc011def.1_5end |
EntrezGene: | CCNJL |
HGNC: | 25876 |
UniProt: | E5RFJ6Q8IV13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.73e-36 | 253 |
embryonic cell | 2.42e-21 | 250 |
endo-epithelial cell | 2.00e-11 | 42 |
endodermal cell | 2.70e-11 | 58 |
kidney cell | 5.80e-10 | 17 |
kidney epithelial cell | 5.80e-10 | 17 |
squamous epithelial cell | 8.37e-10 | 63 |
epithelial cell of nephron | 1.98e-09 | 15 |
meso-epithelial cell | 4.40e-09 | 45 |
endothelial cell | 5.12e-09 | 36 |
lining cell | 7.28e-08 | 58 |
barrier cell | 7.28e-08 | 58 |
ectodermal cell | 8.21e-08 | 72 |
kidney cortical cell | 1.24e-07 | 12 |
renal cortical epithelial cell | 1.24e-07 | 12 |
endothelial cell of vascular tree | 3.14e-07 | 24 |
respiratory epithelial cell | 8.73e-07 | 13 |
kidney tubule cell | 8.90e-07 | 10 |
nephron tubule epithelial cell | 8.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.46e-11 | 101 |
cell layer | 1.29e-10 | 309 |
epithelium | 5.69e-10 | 306 |
nephron epithelium | 1.98e-09 | 15 |
renal tubule | 1.98e-09 | 15 |
nephron tubule | 1.98e-09 | 15 |
nephron | 1.98e-09 | 15 |
uriniferous tubule | 1.98e-09 | 15 |
nephrogenic mesenchyme | 1.98e-09 | 15 |
anatomical conduit | 3.22e-09 | 240 |
endo-epithelium | 4.23e-09 | 82 |
primordium | 4.49e-09 | 160 |
excretory tube | 5.84e-09 | 16 |
kidney epithelium | 5.84e-09 | 16 |
endoderm-derived structure | 1.31e-08 | 160 |
endoderm | 1.31e-08 | 160 |
presumptive endoderm | 1.31e-08 | 160 |
parenchyma | 3.24e-08 | 15 |
embryo | 4.04e-08 | 592 |
tube | 5.91e-08 | 192 |
kidney | 6.87e-08 | 26 |
kidney mesenchyme | 6.87e-08 | 26 |
upper urinary tract | 6.87e-08 | 26 |
kidney rudiment | 6.87e-08 | 26 |
kidney field | 6.87e-08 | 26 |
cortex of kidney | 1.24e-07 | 12 |
renal parenchyma | 1.24e-07 | 12 |
subdivision of trunk | 2.80e-07 | 112 |
epithelial tube | 2.92e-07 | 117 |
digestive system | 3.53e-07 | 145 |
digestive tract | 3.53e-07 | 145 |
primitive gut | 3.53e-07 | 145 |
cavitated compound organ | 4.61e-07 | 31 |
renal system | 5.96e-07 | 48 |
nephron tubule epithelium | 8.90e-07 | 10 |
urinary system structure | 9.51e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.18e-08 | 106 |
cell type cancer | 2.98e-08 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.