FFCP PHASE1:Hg19::chr10:70825861..70825874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002057!3.64e-31!42;CL:0000860!8.79e-29!45;CL:0000766!4.18e-23!76;CL:0000839!5.57e-21!70;CL:0000763!1.50e-20!112;CL:0000049!1.50e-20!112;CL:0002194!6.83e-19!63;CL:0000576!6.83e-19!63;CL:0000040!6.83e-19!63;CL:0000559!6.83e-19!63;CL:0002009!3.49e-18!65;CL:0000557!2.69e-16!71;CL:0000037!1.09e-14!172;CL:0000566!1.09e-14!172;CL:0000738!9.61e-14!140;CL:0000988!1.64e-13!182;CL:0002032!4.24e-13!165;CL:0000837!4.24e-13!165;CL:0002087!1.86e-11!119;CL:0002031!6.21e-11!124;CL:0000764!3.13e-10!2;CL:0000765!3.13e-10!2;CL:0000050!3.13e-10!2;CL:0000038!3.13e-10!2;CL:0000558!3.13e-10!2;CL:0000547!3.13e-10!2;CL:0000549!3.13e-10!2;CL:0000550!3.13e-10!2;CL:0000552!3.13e-10!2;CL:0000094!9.92e-09!8 | |ontology_enrichment_celltype=CL:0002057!3.64e-31!42;CL:0000860!8.79e-29!45;CL:0000766!4.18e-23!76;CL:0000839!5.57e-21!70;CL:0000763!1.50e-20!112;CL:0000049!1.50e-20!112;CL:0002194!6.83e-19!63;CL:0000576!6.83e-19!63;CL:0000040!6.83e-19!63;CL:0000559!6.83e-19!63;CL:0002009!3.49e-18!65;CL:0000557!2.69e-16!71;CL:0000037!1.09e-14!172;CL:0000566!1.09e-14!172;CL:0000738!9.61e-14!140;CL:0000988!1.64e-13!182;CL:0002032!4.24e-13!165;CL:0000837!4.24e-13!165;CL:0002087!1.86e-11!119;CL:0002031!6.21e-11!124;CL:0000764!3.13e-10!2;CL:0000765!3.13e-10!2;CL:0000050!3.13e-10!2;CL:0000038!3.13e-10!2;CL:0000558!3.13e-10!2;CL:0000547!3.13e-10!2;CL:0000549!3.13e-10!2;CL:0000550!3.13e-10!2;CL:0000552!3.13e-10!2;CL:0000094!9.92e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.50e-23;2!CL:0000558;1.50e-23;2!CL:0000771;7.61e-07;2 | |ontology_enrichment_celltype_v019=CL:0000764;1.50e-23;2!CL:0000558;1.50e-23;2!CL:0000771;7.61e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.59e-23,2;CL:0000765,1.59e-23,2;CL:0000050,1.59e-23,2;CL:0000038,1.59e-23,2;CL:0000558,1.59e-23,2;CL:0000547,1.59e-23,2;CL:0000549,1.59e-23,2;CL:0000550,1.59e-23,2;CL:0000552,1.59e-23,2;CL:0000771,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.64e-12;1 | |ontology_enrichment_development_v019=UBERON:0005425;3.64e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.30e-34!15;UBERON:0000179!4.30e-34!15;UBERON:0000463!4.30e-34!15;UBERON:0002390!1.50e-32!102;UBERON:0003061!1.50e-32!102;UBERON:0002193!5.07e-29!112;UBERON:0002371!5.37e-14!80;UBERON:0001474!9.91e-13!86;UBERON:0003081!1.16e-11!216;UBERON:0004765!3.15e-10!101;UBERON:0001434!3.15e-10!101;UBERON:0002405!1.48e-09!115 | |ontology_enrichment_uberon=UBERON:0000178!4.30e-34!15;UBERON:0000179!4.30e-34!15;UBERON:0000463!4.30e-34!15;UBERON:0002390!1.50e-32!102;UBERON:0003061!1.50e-32!102;UBERON:0002193!5.07e-29!112;UBERON:0002371!5.37e-14!80;UBERON:0001474!9.91e-13!86;UBERON:0003081!1.16e-11!216;UBERON:0004765!3.15e-10!101;UBERON:0001434!3.15e-10!101;UBERON:0002405!1.48e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-72;15!UBERON:0000179;1.20e-72;15!UBERON:0000463;1.20e-72;15!UBERON:0002390;4.46e-31;32!UBERON:0002193;1.09e-17;42!UBERON:0000941;3.64e-12;1!UBERON:0001785;3.64e-12;1!UBERON:0002464;3.64e-12;1!UBERON:0004904;3.64e-12;1!UBERON:0001021;3.64e-12;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-72;15!UBERON:0000179;1.20e-72;15!UBERON:0000463;1.20e-72;15!UBERON:0002390;4.46e-31;32!UBERON:0002193;1.09e-17;42!UBERON:0000941;3.64e-12;1!UBERON:0001785;3.64e-12;1!UBERON:0002464;3.64e-12;1!UBERON:0004904;3.64e-12;1!UBERON:0001021;3.64e-12;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.11e-72,15;UBERON:0000179,1.11e-72,15;UBERON:0000463,1.11e-72,15;UBERON:0002390,6.03e-20,98;UBERON:0003061,6.03e-20,98;UBERON:0002193,6.11e-18,108;UBERON:0007023,1.89e-12,114;UBERON:0000941,3.08e-12,1;UBERON:0001785,3.08e-12,1;UBERON:0002464,3.08e-12,1;UBERON:0004904,3.08e-12,1;UBERON:0001021,3.08e-12,1;UBERON:0003902,3.08e-12,1;UBERON:0005425,3.08e-12,1;UBERON:0004535,6.56e-09,109;UBERON:0003081,1.19e-08,203;UBERON:0001009,1.24e-08,112;UBERON:0003714,9.54e-07,2;UBERON:0005162,9.54e-07,2;UBERON:0000122,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,1.03423704220986,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0.918251677112708,0.320929027076094,2.55734850319616,0,0,0,0.580418477257168,0,1.24564449799115,0.251248665256743,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0.450530678524519,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6207734622345,12.0260307471454,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6861902308042,14.5281069357051,10.2536493691349,1.90585420366231,2.46817363851717,13.6179395350471,10.2605973075242,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7638164642858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,1.03423704220986,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0.918251677112708,0.320929027076094,2.55734850319616,0,0,0,0.580418477257168,0,1.24564449799115,0.251248665256743,0,0,0,0.368277635987565,0,0,0.425208599930087,0,0.22465726229299,0.450530678524519,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6207734622345,12.0260307471454,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6861902308042,14.5281069357051,10.2536493691349,1.90585420366231,2.46817363851717,13.6179395350471,10.2605973075242,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7638164642858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:70825861..70825874,+ | |short_description=p@chr10:70825861..70825874,+ | ||
}} | }} |
Revision as of 05:09, 18 November 2012
Short description: | p@chr10:70825861..70825874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:70825861..70825874, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.59e-23 | 2 |
erythroblast | 1.59e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 1.59e-23 | 2 |
erythroid progenitor cell | 1.59e-23 | 2 |
reticulocyte | 1.59e-23 | 2 |
proerythroblast | 1.59e-23 | 2 |
basophilic erythroblast | 1.59e-23 | 2 |
polychromatophilic erythroblast | 1.59e-23 | 2 |
orthochromatic erythroblast | 1.59e-23 | 2 |
eosinophil | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.11e-72 | 15 |
haemolymphatic fluid | 1.11e-72 | 15 |
organism substance | 1.11e-72 | 15 |
hematopoietic system | 6.03e-20 | 98 |
blood island | 6.03e-20 | 98 |
hemolymphoid system | 6.11e-18 | 108 |
adult organism | 1.89e-12 | 114 |
cranial nerve II | 3.08e-12 | 1 |
cranial nerve | 3.08e-12 | 1 |
nerve trunk | 3.08e-12 | 1 |
nerve connecting eye with brain | 3.08e-12 | 1 |
nerve | 3.08e-12 | 1 |
retinal neural layer | 3.08e-12 | 1 |
presumptive neural retina | 3.08e-12 | 1 |
cardiovascular system | 6.56e-09 | 109 |
lateral plate mesoderm | 1.19e-08 | 203 |
circulatory system | 1.24e-08 | 112 |
neural tissue | 9.54e-07 | 2 |
multi cell component structure | 9.54e-07 | 2 |
neuron projection bundle | 9.54e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.