FFCP PHASE1:Hg19::chr2:99388349..99388378,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!1.62e-25!25;CL:0000827!1.62e-25!25;CL:0002087!7.94e-25!119;CL:0000738!2.93e-23!140;CL:0000791!7.36e-21!18;CL:0000789!7.36e-21!18;CL:0002420!7.36e-21!18;CL:0002419!7.36e-21!18;CL:0000790!7.36e-21!18;CL:0000838!4.40e-20!52;CL:0002031!5.20e-20!124;CL:0000542!1.84e-19!53;CL:0000051!1.84e-19!53;CL:0000037!1.81e-18!172;CL:0000566!1.81e-18!172;CL:0000988!3.61e-16!182;CL:0002032!1.46e-15!165;CL:0000837!1.46e-15!165;CL:0000625!1.86e-13!11;CL:0000624!6.10e-08!6 | |ontology_enrichment_celltype=CL:0000084!1.62e-25!25;CL:0000827!1.62e-25!25;CL:0002087!7.94e-25!119;CL:0000738!2.93e-23!140;CL:0000791!7.36e-21!18;CL:0000789!7.36e-21!18;CL:0002420!7.36e-21!18;CL:0002419!7.36e-21!18;CL:0000790!7.36e-21!18;CL:0000838!4.40e-20!52;CL:0002031!5.20e-20!124;CL:0000542!1.84e-19!53;CL:0000051!1.84e-19!53;CL:0000037!1.81e-18!172;CL:0000566!1.81e-18!172;CL:0000988!3.61e-16!182;CL:0002032!1.46e-15!165;CL:0000837!1.46e-15!165;CL:0000625!1.86e-13!11;CL:0000624!6.10e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.80e-43;25!CL:0000791;2.74e-40;18!CL:0000789;2.74e-40;18!CL:0002419;2.74e-40;18!CL:0000625;2.21e-25;11!CL:0000624;2.39e-14;6!CL:0000542;4.12e-13;53!CL:0000235;3.19e-10;6!CL:0002619;7.58e-09;3!CL:0000898;7.64e-08;3!CL:0000623;3.41e-07;3 | |ontology_enrichment_celltype_v019=CL:0000084;5.80e-43;25!CL:0000791;2.74e-40;18!CL:0000789;2.74e-40;18!CL:0002419;2.74e-40;18!CL:0000625;2.21e-25;11!CL:0000624;2.39e-14;6!CL:0000542;4.12e-13;53!CL:0000235;3.19e-10;6!CL:0002619;7.58e-09;3!CL:0000898;7.64e-08;3!CL:0000623;3.41e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.97e-43,25;CL:0000827,1.97e-43,25;CL:0000791,8.95e-41,18;CL:0000789,8.95e-41,18;CL:0002420,8.95e-41,18;CL:0002419,8.95e-41,18;CL:0000790,8.95e-41,18;CL:0000625,1.10e-25,11;CL:0000838,4.22e-25,52;CL:0000542,1.74e-24,53;CL:0000051,1.74e-24,53;CL:0002087,3.80e-20,115;CL:0000738,8.00e-18,136;CL:0002031,1.41e-16,120;CL:0000624,1.71e-14,6;CL:0000037,1.86e-14,168;CL:0000988,3.52e-13,177;CL:0002032,1.10e-12,161;CL:0000837,1.10e-12,161;CL:0000235,3.04e-10,6;CL:0002619,6.59e-09,3;CL:0000898,5.80e-08,3;CL:0000623,4.73e-07,3;CL:0000825,4.73e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.74e-40;18!CL:0000051;4.12e-13;53 | |ontology_enrichment_development_v019=CL:0000790;2.74e-40;18!CL:0000051;4.12e-13;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-31!115;UBERON:0001049!7.64e-12!57;UBERON:0005068!7.64e-12!57;UBERON:0006241!7.64e-12!57;UBERON:0007135!7.64e-12!57;UBERON:0002390!2.05e-11!102;UBERON:0003061!2.05e-11!102;UBERON:0002193!1.54e-10!112;UBERON:0003080!3.22e-10!42;UBERON:0000178!1.21e-09!15;UBERON:0000179!1.21e-09!15;UBERON:0000463!1.21e-09!15;UBERON:0002780!1.22e-09!41;UBERON:0001890!1.22e-09!41;UBERON:0006240!1.22e-09!41;UBERON:0001893!2.02e-09!34;UBERON:0002020!2.17e-09!34;UBERON:0003528!2.17e-09!34;UBERON:0002616!2.61e-09!59;UBERON:0002791!5.97e-09!33;UBERON:0003075!8.51e-09!86;UBERON:0007284!8.51e-09!86;UBERON:0001017!3.99e-08!82;UBERON:0001869!4.06e-08!32;UBERON:0002346!6.03e-08!90;UBERON:0005743!8.07e-08!86;UBERON:0000955!3.93e-07!69;UBERON:0006238!3.93e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.29e-31!115;UBERON:0001049!7.64e-12!57;UBERON:0005068!7.64e-12!57;UBERON:0006241!7.64e-12!57;UBERON:0007135!7.64e-12!57;UBERON:0002390!2.05e-11!102;UBERON:0003061!2.05e-11!102;UBERON:0002193!1.54e-10!112;UBERON:0003080!3.22e-10!42;UBERON:0000178!1.21e-09!15;UBERON:0000179!1.21e-09!15;UBERON:0000463!1.21e-09!15;UBERON:0002780!1.22e-09!41;UBERON:0001890!1.22e-09!41;UBERON:0006240!1.22e-09!41;UBERON:0001893!2.02e-09!34;UBERON:0002020!2.17e-09!34;UBERON:0003528!2.17e-09!34;UBERON:0002616!2.61e-09!59;UBERON:0002791!5.97e-09!33;UBERON:0003075!8.51e-09!86;UBERON:0007284!8.51e-09!86;UBERON:0001017!3.99e-08!82;UBERON:0001869!4.06e-08!32;UBERON:0002346!6.03e-08!90;UBERON:0005743!8.07e-08!86;UBERON:0000955!3.93e-07!69;UBERON:0006238!3.93e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-16;15!UBERON:0000179;1.49e-16;15!UBERON:0000463;1.49e-16;15!UBERON:0002390;6.60e-10;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-16;15!UBERON:0000179;1.49e-16;15!UBERON:0000463;1.49e-16;15!UBERON:0002390;6.60e-10;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.81e-16,15;UBERON:0000179,1.81e-16,15;UBERON:0000463,1.81e-16,15;UBERON:0002370,3.62e-10,4;UBERON:0005058,3.62e-10,4;UBERON:0009113,3.62e-10,4;UBERON:0003295,3.62e-10,4;UBERON:0005562,3.62e-10,4;UBERON:0002390,2.11e-09,98;UBERON:0003061,2.11e-09,98;UBERON:0002193,5.69e-08,108;UBERON:0003351,9.21e-07,6 | |||
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| ||
|short_description=p1@ENST00000448595 | |short_description=p1@ENST00000448595 | ||
}} | }} |
Revision as of 05:35, 18 November 2012
Short description: | p1@ENST00000448595 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000448595_5end |
Coexpression cluster: | C726_chronic_CD4_Hodgkin_CD8_thymus_CD19_blood |
Association with transcript: | 164bp_to_ENST00000448595_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.97e-43 | 25 |
pro-T cell | 1.97e-43 | 25 |
mature alpha-beta T cell | 8.95e-41 | 18 |
alpha-beta T cell | 8.95e-41 | 18 |
immature T cell | 8.95e-41 | 18 |
mature T cell | 8.95e-41 | 18 |
immature alpha-beta T cell | 8.95e-41 | 18 |
CD8-positive, alpha-beta T cell | 1.10e-25 | 11 |
lymphoid lineage restricted progenitor cell | 4.22e-25 | 52 |
lymphocyte | 1.74e-24 | 53 |
common lymphoid progenitor | 1.74e-24 | 53 |
nongranular leukocyte | 3.80e-20 | 115 |
leukocyte | 8.00e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.41e-16 | 120 |
CD4-positive, alpha-beta T cell | 1.71e-14 | 6 |
hematopoietic stem cell | 1.86e-14 | 168 |
hematopoietic cell | 3.52e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.10e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-12 | 161 |
macrophage | 3.04e-10 | 6 |
adult endothelial progenitor cell | 6.59e-09 | 3 |
naive T cell | 5.80e-08 | 3 |
natural killer cell | 4.73e-07 | 3 |
pro-NK cell | 4.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.81e-16 | 15 |
haemolymphatic fluid | 1.81e-16 | 15 |
organism substance | 1.81e-16 | 15 |
thymus | 3.62e-10 | 4 |
hemolymphoid system gland | 3.62e-10 | 4 |
thymic region | 3.62e-10 | 4 |
pharyngeal gland | 3.62e-10 | 4 |
thymus primordium | 3.62e-10 | 4 |
hematopoietic system | 2.11e-09 | 98 |
blood island | 2.11e-09 | 98 |
hemolymphoid system | 5.69e-08 | 108 |
pharyngeal epithelium | 9.21e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.