FFCP PHASE1:Hg19::chr12:66218836..66218888,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!5.77e-32!248;CL:0000220!5.15e-31!246;CL:0000055!3.41e-27!180;CL:0000012!2.18e-21!682;CL:0000548!1.81e-20!679;CL:0000004!1.81e-20!679;CL:0000255!1.81e-20!679;CL:0000144!4.93e-18!625;CL:0000680!7.50e-18!57;CL:0000056!7.50e-18!57;CL:0000355!7.50e-18!57;CL:0002371!4.02e-17!591;CL:0000066!6.26e-17!254;CL:0000393!6.86e-17!60;CL:0000211!6.86e-17!60;CL:0000183!1.42e-16!59;CL:0000222!1.82e-16!119;CL:0000187!1.88e-16!54;CL:0000192!4.27e-15!42;CL:0000514!4.27e-15!42;CL:0000359!4.71e-13!32;CL:0000223!2.36e-10!59;CL:0002076!3.10e-10!43;CL:0000003!5.66e-10!722;CL:0000057!1.02e-08!75 | |ontology_enrichment_celltype=CL:0002321!5.77e-32!248;CL:0000220!5.15e-31!246;CL:0000055!3.41e-27!180;CL:0000012!2.18e-21!682;CL:0000548!1.81e-20!679;CL:0000004!1.81e-20!679;CL:0000255!1.81e-20!679;CL:0000144!4.93e-18!625;CL:0000680!7.50e-18!57;CL:0000056!7.50e-18!57;CL:0000355!7.50e-18!57;CL:0002371!4.02e-17!591;CL:0000066!6.26e-17!254;CL:0000393!6.86e-17!60;CL:0000211!6.86e-17!60;CL:0000183!1.42e-16!59;CL:0000222!1.82e-16!119;CL:0000187!1.88e-16!54;CL:0000192!4.27e-15!42;CL:0000514!4.27e-15!42;CL:0000359!4.71e-13!32;CL:0000223!2.36e-10!59;CL:0002076!3.10e-10!43;CL:0000003!5.66e-10!722;CL:0000057!1.02e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-12;32!CL:0000192;2.40e-11;43!CL:0000187;9.41e-10;55!CL:0000393;1.41e-08;61!CL:0000211;1.41e-08;61!CL:0002076;3.00e-08;42!CL:0002539;9.33e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;1.13e-12;32!CL:0000192;2.40e-11;43!CL:0000187;9.41e-10;55!CL:0000393;1.41e-08;61!CL:0000211;1.41e-08;61!CL:0002076;3.00e-08;42!CL:0002539;9.33e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.15e-32,250;CL:0000680,1.44e-18,58;CL:0000056,1.44e-18,58;CL:0000355,1.44e-18,58;CL:0000393,1.40e-17,61;CL:0000211,1.40e-17,61;CL:0000187,4.02e-17,55;CL:0000066,7.85e-17,253;CL:0000222,1.84e-16,121;CL:0000192,1.06e-15,43;CL:0000514,1.06e-15,43;CL:0000359,1.94e-13,32;CL:0000223,1.34e-10,58;CL:0002076,1.65e-10,42;CL:0000057,4.46e-09,76;CL:0002539,9.67e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.40e-11;43!CL:0000355;5.04e-10;58 | |ontology_enrichment_development_v019=CL:0000514;2.40e-11;43!CL:0000355;5.04e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.52e-20!143;UBERON:0000486!2.81e-20!82;UBERON:0000914!4.78e-20!83;UBERON:0002329!4.78e-20!83;UBERON:0003077!4.78e-20!83;UBERON:0003059!4.78e-20!83;UBERON:0007282!4.78e-20!83;UBERON:0009618!4.78e-20!83;UBERON:0007285!4.78e-20!83;UBERON:0000490!1.98e-18!138;UBERON:0004290!1.60e-17!70;UBERON:0002100!6.18e-16!216;UBERON:0001134!1.04e-15!61;UBERON:0002036!1.04e-15!61;UBERON:0003082!1.04e-15!61;UBERON:0003914!2.38e-15!118;UBERON:0002049!2.55e-15!79;UBERON:0007798!2.55e-15!79;UBERON:0003104!4.89e-15!238;UBERON:0009142!4.89e-15!238;UBERON:0002385!6.98e-15!63;UBERON:0001015!6.98e-15!63;UBERON:0000383!6.98e-15!63;UBERON:0001637!7.11e-13!42;UBERON:0003509!7.11e-13!42;UBERON:0004572!7.11e-13!42;UBERON:0001981!3.18e-12!60;UBERON:0007500!3.18e-12!60;UBERON:0004537!3.18e-12!60;UBERON:0006965!3.18e-12!60;UBERON:0000481!3.83e-12!347;UBERON:0004872!6.39e-12!84;UBERON:0000055!1.37e-11!69;UBERON:0000119!2.40e-11!312;UBERON:0000475!7.07e-11!365;UBERON:0000483!1.02e-10!309;UBERON:0004573!3.63e-10!33;UBERON:0004571!3.63e-10!33;UBERON:0000468!2.03e-09!659;UBERON:0004535!3.00e-09!110;UBERON:0000922!2.09e-08!612;UBERON:0001009!2.10e-08!113;UBERON:0003102!4.83e-08!95;UBERON:0000467!1.96e-07!625;UBERON:0000926!2.11e-07!448;UBERON:0004120!2.11e-07!448;UBERON:0006603!2.11e-07!448;UBERON:0000480!3.05e-07!626;UBERON:0000947!4.18e-07!21;UBERON:0010191!4.18e-07!21;UBERON:0002050!4.56e-07!605;UBERON:0005423!4.56e-07!605;UBERON:0000923!4.69e-07!604;UBERON:0005291!4.69e-07!604;UBERON:0006598!4.69e-07!604;UBERON:0002532!4.69e-07!604;UBERON:0001444!7.06e-07!48 | |ontology_enrichment_uberon=UBERON:0005256!1.52e-20!143;UBERON:0000486!2.81e-20!82;UBERON:0000914!4.78e-20!83;UBERON:0002329!4.78e-20!83;UBERON:0003077!4.78e-20!83;UBERON:0003059!4.78e-20!83;UBERON:0007282!4.78e-20!83;UBERON:0009618!4.78e-20!83;UBERON:0007285!4.78e-20!83;UBERON:0000490!1.98e-18!138;UBERON:0004290!1.60e-17!70;UBERON:0002100!6.18e-16!216;UBERON:0001134!1.04e-15!61;UBERON:0002036!1.04e-15!61;UBERON:0003082!1.04e-15!61;UBERON:0003914!2.38e-15!118;UBERON:0002049!2.55e-15!79;UBERON:0007798!2.55e-15!79;UBERON:0003104!4.89e-15!238;UBERON:0009142!4.89e-15!238;UBERON:0002385!6.98e-15!63;UBERON:0001015!6.98e-15!63;UBERON:0000383!6.98e-15!63;UBERON:0001637!7.11e-13!42;UBERON:0003509!7.11e-13!42;UBERON:0004572!7.11e-13!42;UBERON:0001981!3.18e-12!60;UBERON:0007500!3.18e-12!60;UBERON:0004537!3.18e-12!60;UBERON:0006965!3.18e-12!60;UBERON:0000481!3.83e-12!347;UBERON:0004872!6.39e-12!84;UBERON:0000055!1.37e-11!69;UBERON:0000119!2.40e-11!312;UBERON:0000475!7.07e-11!365;UBERON:0000483!1.02e-10!309;UBERON:0004573!3.63e-10!33;UBERON:0004571!3.63e-10!33;UBERON:0000468!2.03e-09!659;UBERON:0004535!3.00e-09!110;UBERON:0000922!2.09e-08!612;UBERON:0001009!2.10e-08!113;UBERON:0003102!4.83e-08!95;UBERON:0000467!1.96e-07!625;UBERON:0000926!2.11e-07!448;UBERON:0004120!2.11e-07!448;UBERON:0006603!2.11e-07!448;UBERON:0000480!3.05e-07!626;UBERON:0000947!4.18e-07!21;UBERON:0010191!4.18e-07!21;UBERON:0002050!4.56e-07!605;UBERON:0005423!4.56e-07!605;UBERON:0000923!4.69e-07!604;UBERON:0005291!4.69e-07!604;UBERON:0006598!4.69e-07!604;UBERON:0002532!4.69e-07!604;UBERON:0001444!7.06e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-09;33!UBERON:0004571;2.11e-09;33!UBERON:0001637;3.77e-09;42!UBERON:0003509;3.77e-09;42!UBERON:0004572;3.77e-09;42!UBERON:0003914;2.68e-08;74!UBERON:0007500;2.98e-08;56!UBERON:0001981;2.98e-08;56!UBERON:0004537;2.98e-08;56!UBERON:0002049;8.30e-08;75!UBERON:0007798;8.30e-08;75!UBERON:0000947;5.37e-07;21!UBERON:0010191;5.37e-07;21!UBERON:0002385;6.61e-07;31!UBERON:0001015;6.61e-07;31!UBERON:0000383;6.61e-07;31!UBERON:0004237;9.33e-07;10!UBERON:0004695;9.33e-07;10!UBERON:0002111;9.33e-07;10!UBERON:0004178;9.33e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-09;33!UBERON:0004571;2.11e-09;33!UBERON:0001637;3.77e-09;42!UBERON:0003509;3.77e-09;42!UBERON:0004572;3.77e-09;42!UBERON:0003914;2.68e-08;74!UBERON:0007500;2.98e-08;56!UBERON:0001981;2.98e-08;56!UBERON:0004537;2.98e-08;56!UBERON:0002049;8.30e-08;75!UBERON:0007798;8.30e-08;75!UBERON:0000947;5.37e-07;21!UBERON:0010191;5.37e-07;21!UBERON:0002385;6.61e-07;31!UBERON:0001015;6.61e-07;31!UBERON:0000383;6.61e-07;31!UBERON:0004237;9.33e-07;10!UBERON:0004695;9.33e-07;10!UBERON:0002111;9.33e-07;10!UBERON:0004178;9.33e-07;10 | ||
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| ||
|short_description=p1@HMGA2 | |short_description=p1@HMGA2 | ||
}} | }} |
Revision as of 09:59, 18 November 2012
Short description: | p1@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HMGA2_5end |
Coexpression cluster: | C1682_schwannoma_Fibroblast_hepatoblastoma_Wilms_adrenal_Aortic_meningioma |
Association with transcript: | -14bp_to_ENST00000393577_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | F5H2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.15e-32 | 250 |
muscle precursor cell | 1.44e-18 | 58 |
myoblast | 1.44e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-18 | 58 |
electrically responsive cell | 1.40e-17 | 61 |
electrically active cell | 1.40e-17 | 61 |
muscle cell | 4.02e-17 | 55 |
epithelial cell | 7.85e-17 | 253 |
mesodermal cell | 1.84e-16 | 121 |
smooth muscle cell | 1.06e-15 | 43 |
smooth muscle myoblast | 1.06e-15 | 43 |
vascular associated smooth muscle cell | 1.94e-13 | 32 |
endodermal cell | 1.34e-10 | 58 |
endo-epithelial cell | 1.65e-10 | 42 |
fibroblast | 4.46e-09 | 76 |
aortic smooth muscle cell | 9.67e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.