FFCP PHASE1:Hg19::chr14:35452304..35452319,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000012!3.99e-24!682;CL:0000037!8.85e-24!172;CL:0000566!8.85e-24!172;CL:0000763!2.72e-23!112;CL:0000049!2.72e-23!112;CL:0000988!2.83e-23!182;CL:0000548!1.95e-22!679;CL:0000004!1.95e-22!679;CL:0000255!1.95e-22!679;CL:0000034!4.70e-22!444;CL:0002032!5.27e-22!165;CL:0000837!5.27e-22!165;CL:0000048!2.99e-20!430;CL:0000723!6.51e-20!436;CL:0000003!1.39e-18!722;CL:0000738!2.91e-18!140;CL:0000766!2.25e-17!76;CL:0000144!5.59e-17!625;CL:0000839!3.25e-16!70;CL:0000557!3.48e-16!71;CL:0002031!1.20e-15!124;CL:0002057!5.58e-15!42;CL:0000860!1.23e-14!45;CL:0002009!1.27e-14!65;CL:0000063!1.77e-14!578;CL:0000134!7.28e-14!358;CL:0002194!1.63e-13!63;CL:0000576!1.63e-13!63;CL:0000040!1.63e-13!63;CL:0000559!1.63e-13!63;CL:0002087!5.58e-13!119;CL:0002320!2.13e-12!365;CL:0002371!8.41e-12!591;CL:0000219!1.28e-10!390 | |ontology_enrichment_celltype=CL:0000012!3.99e-24!682;CL:0000037!8.85e-24!172;CL:0000566!8.85e-24!172;CL:0000763!2.72e-23!112;CL:0000049!2.72e-23!112;CL:0000988!2.83e-23!182;CL:0000548!1.95e-22!679;CL:0000004!1.95e-22!679;CL:0000255!1.95e-22!679;CL:0000034!4.70e-22!444;CL:0002032!5.27e-22!165;CL:0000837!5.27e-22!165;CL:0000048!2.99e-20!430;CL:0000723!6.51e-20!436;CL:0000003!1.39e-18!722;CL:0000738!2.91e-18!140;CL:0000766!2.25e-17!76;CL:0000144!5.59e-17!625;CL:0000839!3.25e-16!70;CL:0000557!3.48e-16!71;CL:0002031!1.20e-15!124;CL:0002057!5.58e-15!42;CL:0000860!1.23e-14!45;CL:0002009!1.27e-14!65;CL:0000063!1.77e-14!578;CL:0000134!7.28e-14!358;CL:0002194!1.63e-13!63;CL:0000576!1.63e-13!63;CL:0000040!1.63e-13!63;CL:0000559!1.63e-13!63;CL:0002087!5.58e-13!119;CL:0002320!2.13e-12!365;CL:0002371!8.41e-12!591;CL:0000219!1.28e-10!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-14;33!CL:0002057;3.33e-14;33!CL:0000473;4.92e-11;39!CL:0000234;4.92e-11;39!CL:0000576;1.11e-09;48!CL:0000766;1.66e-08;69!CL:0000763;2.87e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.33e-14;33!CL:0002057;3.33e-14;33!CL:0000473;4.92e-11;39!CL:0000234;4.92e-11;39!CL:0000576;1.11e-09;48!CL:0000766;1.66e-08;69!CL:0000763;2.87e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.22e-24,108;CL:0000049,4.22e-24,108;CL:0000988,1.35e-23,177;CL:0000037,1.88e-23,168;CL:0000034,3.83e-22,441;CL:0002032,1.24e-21,161;CL:0000837,1.24e-21,161;CL:0000048,3.49e-20,427;CL:0000723,5.88e-20,433;CL:0000766,1.13e-18,72;CL:0000738,4.28e-18,136;CL:0000839,2.88e-17,66;CL:0000557,3.17e-17,67;CL:0002009,1.37e-15,61;CL:0000860,1.53e-15,42;CL:0002057,1.53e-15,42;CL:0002031,1.93e-15,120;CL:0002194,2.10e-14,59;CL:0000576,2.10e-14,59;CL:0000040,2.10e-14,59;CL:0000559,2.10e-14,59;CL:0000473,2.55e-14,48;CL:0000234,2.55e-14,48;CL:0000134,4.71e-14,354;CL:0002087,1.05e-12,115;CL:0002320,1.41e-12,361;CL:0000219,9.38e-11,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.92e-12;42!CL:0000049;4.88e-07;108 | |ontology_enrichment_development_v019=CL:0002057;9.92e-12;42!CL:0000049;4.88e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.37e-13!80;UBERON:0001474!4.18e-12!86;UBERON:0002384!5.17e-12!375;UBERON:0002390!8.19e-12!102;UBERON:0003061!8.19e-12!102;UBERON:0002204!7.65e-11!167;UBERON:0002405!2.90e-10!115;UBERON:0002193!7.01e-10!112;UBERON:0003081!8.07e-10!216;UBERON:0004765!1.69e-09!101;UBERON:0001434!1.69e-09!101;UBERON:0001737!5.64e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!4.37e-13!80;UBERON:0001474!4.18e-12!86;UBERON:0002384!5.17e-12!375;UBERON:0002390!8.19e-12!102;UBERON:0003061!8.19e-12!102;UBERON:0002204!7.65e-11!167;UBERON:0002405!2.90e-10!115;UBERON:0002193!7.01e-10!112;UBERON:0003081!8.07e-10!216;UBERON:0004765!1.69e-09!101;UBERON:0001434!1.69e-09!101;UBERON:0001737!5.64e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.81e-07;9!UBERON:0001557;2.81e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.81e-07;9!UBERON:0001557;2.81e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.43e-14,76;UBERON:0003081,1.28e-12,203;UBERON:0001474,2.19e-12,82;UBERON:0002390,2.42e-12,98;UBERON:0003061,2.42e-12,98;UBERON:0002384,4.27e-12,371;UBERON:0004765,4.37e-11,90;UBERON:0002405,6.99e-11,93;UBERON:0002193,1.16e-10,108;UBERON:0002204,1.93e-09,167;UBERON:0001434,6.03e-08,100;UBERON:0000926,7.75e-08,315;UBERON:0004120,7.75e-08,315;UBERON:0006603,7.75e-08,315;UBERON:0001737,3.34e-07,9 | |||
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| ||
|short_description=p4@SRP54 | |short_description=p4@SRP54 | ||
}} | }} |
Revision as of 17:34, 18 November 2012
Short description: | p4@SRP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SRP54_5end |
Coexpression cluster: | C1561_Mast_Eosinophils_Neutrophils_CD14_immature_Whole_Hep2 |
Association with transcript: | 0bp_to_ENST00000556380_5end |
EntrezGene: | SRP54 |
HGNC: | 11301 |
UniProt: | G3V3L9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.22e-24 | 108 |
common myeloid progenitor | 4.22e-24 | 108 |
hematopoietic cell | 1.35e-23 | 177 |
hematopoietic stem cell | 1.88e-23 | 168 |
stem cell | 3.83e-22 | 441 |
hematopoietic oligopotent progenitor cell | 1.24e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-21 | 161 |
multi fate stem cell | 3.49e-20 | 427 |
somatic stem cell | 5.88e-20 | 433 |
myeloid leukocyte | 1.13e-18 | 72 |
leukocyte | 4.28e-18 | 136 |
myeloid lineage restricted progenitor cell | 2.88e-17 | 66 |
granulocyte monocyte progenitor cell | 3.17e-17 | 67 |
macrophage dendritic cell progenitor | 1.37e-15 | 61 |
classical monocyte | 1.53e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-15 | 42 |
hematopoietic lineage restricted progenitor cell | 1.93e-15 | 120 |
monopoietic cell | 2.10e-14 | 59 |
monocyte | 2.10e-14 | 59 |
monoblast | 2.10e-14 | 59 |
promonocyte | 2.10e-14 | 59 |
defensive cell | 2.55e-14 | 48 |
phagocyte | 2.55e-14 | 48 |
mesenchymal cell | 4.71e-14 | 354 |
nongranular leukocyte | 1.05e-12 | 115 |
connective tissue cell | 1.41e-12 | 361 |
motile cell | 9.38e-11 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.43e-14 | 76 |
lateral plate mesoderm | 1.28e-12 | 203 |
bone element | 2.19e-12 | 82 |
hematopoietic system | 2.42e-12 | 98 |
blood island | 2.42e-12 | 98 |
connective tissue | 4.27e-12 | 371 |
skeletal element | 4.37e-11 | 90 |
immune system | 6.99e-11 | 93 |
hemolymphoid system | 1.16e-10 | 108 |
musculoskeletal system | 1.93e-09 | 167 |
skeletal system | 6.03e-08 | 100 |
mesoderm | 7.75e-08 | 315 |
mesoderm-derived structure | 7.75e-08 | 315 |
presumptive mesoderm | 7.75e-08 | 315 |
larynx | 3.34e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.