FFCP PHASE1:Hg19::chrX:9866198..9866234,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.97e-15!180;CL:0000062!6.57e-09!11;CL:0000375!6.57e-09!11;CL:0000335!6.57e-09!11;CL:0002540!2.94e-07!6;CL:0000148!5.69e-07!10;CL:0000541!5.69e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.97e-15!180;CL:0000062!6.57e-09!11;CL:0000375!6.57e-09!11;CL:0000335!6.57e-09!11;CL:0002540!2.94e-07!6;CL:0000148!5.69e-07!10;CL:0000541!5.69e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000062;5.29e-12;9!CL:0002540;6.93e-10;6!CL:0002552;5.91e-08;5!CL:0002092;7.10e-08;10!CL:0000708;9.54e-08;3!CL:0000148;1.08e-07;10!CL:0002567;1.44e-07;3!CL:0002556;7.09e-07;6 | |ontology_enrichment_celltype_v019=CL:0000062;5.29e-12;9!CL:0002540;6.93e-10;6!CL:0002552;5.91e-08;5!CL:0002092;7.10e-08;10!CL:0000708;9.54e-08;3!CL:0000148;1.08e-07;10!CL:0002567;1.44e-07;3!CL:0002556;7.09e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.15e-12,11;CL:0000375,1.15e-12,11;CL:0000335,1.15e-12,11;CL:0000219,2.20e-10,386;CL:0002540,4.29e-10,6;CL:0002320,1.26e-08,361;CL:0002092,3.81e-08,10;CL:0002552,7.40e-08,5;CL:0000708,8.29e-08,3;CL:0000148,1.13e-07,10;CL:0000541,1.13e-07,10;CL:0002567,1.72e-07,3;CL:0000134,2.07e-07,354;CL:0000048,2.97e-07,427;CL:0002556,5.95e-07,6;CL:0000723,6.02e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000335;2.67e-12;11 | |ontology_enrichment_development_v019=CL:0000335;2.67e-12;11 | ||
|ontology_enrichment_disease=DOID:2394!2.13e-10!14 | |ontology_enrichment_disease=DOID:2394!2.13e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.96e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;1.96e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.55e-12!69;UBERON:0006238!1.55e-12!69;UBERON:0001017!2.35e-12!82;UBERON:0000073!4.74e-12!94;UBERON:0001016!4.74e-12!94;UBERON:0005743!1.07e-11!86;UBERON:0001049!1.15e-11!57;UBERON:0005068!1.15e-11!57;UBERON:0006241!1.15e-11!57;UBERON:0007135!1.15e-11!57;UBERON:0002616!1.26e-11!59;UBERON:0000033!3.10e-11!123;UBERON:0000153!8.17e-11!129;UBERON:0007811!8.17e-11!129;UBERON:0002020!2.76e-10!34;UBERON:0003528!2.76e-10!34;UBERON:0001893!4.08e-10!34;UBERON:0002780!7.16e-10!41;UBERON:0001890!7.16e-10!41;UBERON:0006240!7.16e-10!41;UBERON:0002791!1.04e-09!33;UBERON:0003080!1.90e-09!42;UBERON:0001869!5.13e-09!32;UBERON:0000924!7.85e-09!173;UBERON:0006601!7.85e-09!173;UBERON:0004121!1.14e-08!169;UBERON:0002346!5.54e-08!90;UBERON:0003075!7.06e-08!86;UBERON:0007284!7.06e-08!86;UBERON:0003056!1.78e-07!61;UBERON:0000475!2.52e-07!365;UBERON:0000956!8.64e-07!25;UBERON:0000203!8.64e-07!25 | |ontology_enrichment_uberon=UBERON:0000955!1.55e-12!69;UBERON:0006238!1.55e-12!69;UBERON:0001017!2.35e-12!82;UBERON:0000073!4.74e-12!94;UBERON:0001016!4.74e-12!94;UBERON:0005743!1.07e-11!86;UBERON:0001049!1.15e-11!57;UBERON:0005068!1.15e-11!57;UBERON:0006241!1.15e-11!57;UBERON:0007135!1.15e-11!57;UBERON:0002616!1.26e-11!59;UBERON:0000033!3.10e-11!123;UBERON:0000153!8.17e-11!129;UBERON:0007811!8.17e-11!129;UBERON:0002020!2.76e-10!34;UBERON:0003528!2.76e-10!34;UBERON:0001893!4.08e-10!34;UBERON:0002780!7.16e-10!41;UBERON:0001890!7.16e-10!41;UBERON:0006240!7.16e-10!41;UBERON:0002791!1.04e-09!33;UBERON:0003080!1.90e-09!42;UBERON:0001869!5.13e-09!32;UBERON:0000924!7.85e-09!173;UBERON:0006601!7.85e-09!173;UBERON:0004121!1.14e-08!169;UBERON:0002346!5.54e-08!90;UBERON:0003075!7.06e-08!86;UBERON:0007284!7.06e-08!86;UBERON:0003056!1.78e-07!61;UBERON:0000475!2.52e-07!365;UBERON:0000956!8.64e-07!25;UBERON:0000203!8.64e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001434;4.64e-13;36!UBERON:0004765;8.66e-12;26!UBERON:0001474;1.17e-10;18!UBERON:0000075;3.39e-08;16!UBERON:0003210;9.54e-08;3!UBERON:0001758;7.09e-07;6!UBERON:0003672;7.09e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001434;4.64e-13;36!UBERON:0004765;8.66e-12;26!UBERON:0001474;1.17e-10;18!UBERON:0000075;3.39e-08;16!UBERON:0003210;9.54e-08;3!UBERON:0001758;7.09e-07;6!UBERON:0003672;7.09e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.48e-09,371;UBERON:0000075,1.91e-08,16;UBERON:0003210,8.29e-08,3;UBERON:0001758,5.95e-07,6;UBERON:0003672,5.95e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,1.73272894144065,2.65117900582333,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,1.30361867064741,0,2.91980922181582,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0.597794722207204,0,0,0,2.24569588380383,0.982674538494144,1.13658359293342,4.75201142912821,9.39614331258516,0,0,0.841680569770331,1.50142223846357,0,18.4370600769952,5.82326812018137,10.5166641234618,0,0.179389635688862,1.70845911054854,1.05965950579781,0,2.47326070172253,0.515281080091258,1.48893485065272,0,0,0,0.644349290496095,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,2.29193055334967,1.17217447210047,3.4214489204541,1.54241239054985,9.01029173531752,1.14330573052231,8.18556915721133,1.30788020649984,2.6401782895542,0.775630294546667,0,0.845302752556,1.59562869950922,0,6.94459910507784,1.41849132023278,7.72624319146688,0.142977993658148,0,2.46972101034231,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,22.8219048065149,0.289562613335158,0.61642896765115,0.895304816199478,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,3.52644530809656,0,0.535286966391485,0,0.35142424497814,4.51419149591578,0,1.03473071292505,5.97803038681893,11.799626786669,0.781952530212746,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0,0,1.02341449813341,0,0,0.462629081407967,0.887808626565635,0,1.03850885836724,0,0,0,0,0.114814448164607,0.728364672026868,0.262248829918848,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,1.35473218771926,0,0,0,0.223874754722178,0,0,0,0,0,0,3.93748698718877,1.89771849817352,0,0,0,0.096670718292122,0.154048617114644,0,1.37836572484531,0.214840489736547,0.435050081742686,0.681813019328807,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.762520775695299,1.02359116524534,1.71175595213568,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,1.22849920267187,0,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0.286822704408103,0.392996164052485,0,0,0,0,0,3.84928192269481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,4.80907482658071,0,0,0,3.12620952643264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.445234820091624,0,0,0,0,0,5.21570280760989,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.87754158861589,0,0,0,1.02547850262301,0.23056390438806,0,0,0,1.28236630762607,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14581926067151,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,2.46675464364152,0.19871461170299,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.407992870545287,0.577901179803038,2.40168115483916,0.273810757783986,0,0,5.5206344398656,0,0,0,0,0.429226048136571,0,0,1.44119953416961,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.728994679896296,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,1.01980882368113,0,0,1.16354660725395,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.665574309221114,0.310482014706917,0,0,0.454947352624943,16.8424546791531,0,0,0,0,0,0,5.11388114242741,1.76097531226803,0.889811221596536,0,0,0,0,1.91156120596443,0.449803112163605,1.55262956876259,2.07353103920428,3.72178400381193,4.69570555630561,0.150257608997218,0.761610424337591,1.22061219961398,4.36436782086143,0.429642228169954,0.464033759878494,6.36953421917786,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.883445729729405,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0.318004350653419,0,0,1.76337971845342,0,0.578063025868136,0,0.478901577171454,1.02558182120378,0.252071696221718,0.207471757392654,0.807378228159255,0,0,0,0,0,1.90691047733584,0.690359926060101,1.79024599904647,0,2.62216589314576,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,1.01954599465248,0.460409414939944,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,2.01164401241961,3.23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| ||
|short_description=p5@SHROOM2 | |short_description=p5@SHROOM2 | ||
}} | }} |
Revision as of 06:35, 19 November 2012
Short description: | p5@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000493668_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.15e-12 | 11 |
osteoprogenitor cell | 1.15e-12 | 11 |
mesenchyme condensation cell | 1.15e-12 | 11 |
motile cell | 2.20e-10 | 386 |
mesenchymal stem cell of the bone marrow | 4.29e-10 | 6 |
connective tissue cell | 1.26e-08 | 361 |
bone marrow cell | 3.81e-08 | 10 |
fibroblast of gingiva | 7.40e-08 | 5 |
leptomeningeal cell | 8.29e-08 | 3 |
melanocyte | 1.13e-07 | 10 |
melanoblast | 1.13e-07 | 10 |
light melanocyte | 1.72e-07 | 3 |
mesenchymal cell | 2.07e-07 | 354 |
multi fate stem cell | 2.97e-07 | 427 |
fibroblast of periodontium | 5.95e-07 | 6 |
somatic stem cell | 6.02e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.48e-09 | 371 |
subdivision of skeletal system | 1.91e-08 | 16 |
blood-cerebrospinal fluid barrier | 8.29e-08 | 3 |
periodontium | 5.95e-07 | 6 |
dentition | 5.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.