FFCP PHASE1:Hg19::chr20:3996165..3996245,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000048!2.13e-20!430;CL:0000034!5.50e-20!444;CL:0002057!6.97e-20!42;CL:0000763!2.55e-19!112;CL:0000049!2.55e-19!112;CL:0000723!8.60e-19!436;CL:0000860!1.58e-18!45;CL:0002320!7.52e-15!365;CL:0000134!4.22e-14!358;CL:0002009!4.33e-13!65;CL:0000766!1.90e-12!76;CL:0002194!3.91e-12!63;CL:0000576!3.91e-12!63;CL:0000040!3.91e-12!63;CL:0000559!3.91e-12!63;CL:0000219!1.57e-11!390;CL:0000557!1.47e-10!71;CL:0000839!1.72e-09!70;CL:0000055!9.60e-09!180;CL:0000057!6.62e-07!75 | |ontology_enrichment_celltype=CL:0000048!2.13e-20!430;CL:0000034!5.50e-20!444;CL:0002057!6.97e-20!42;CL:0000763!2.55e-19!112;CL:0000049!2.55e-19!112;CL:0000723!8.60e-19!436;CL:0000860!1.58e-18!45;CL:0002320!7.52e-15!365;CL:0000134!4.22e-14!358;CL:0002009!4.33e-13!65;CL:0000766!1.90e-12!76;CL:0002194!3.91e-12!63;CL:0000576!3.91e-12!63;CL:0000040!3.91e-12!63;CL:0000559!3.91e-12!63;CL:0000219!1.57e-11!390;CL:0000557!1.47e-10!71;CL:0000839!1.72e-09!70;CL:0000055!9.60e-09!180;CL:0000057!6.62e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-18;33!CL:0002057;1.17e-18;33!CL:0000576;9.29e-12;48!CL:0000473;2.70e-10;39!CL:0000234;2.70e-10;39!CL:0000763;4.45e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.17e-18;33!CL:0002057;1.17e-18;33!CL:0000576;9.29e-12;48!CL:0000473;2.70e-10;39!CL:0000234;2.70e-10;39!CL:0000763;4.45e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,9.89e-21,427;CL:0000034,2.62e-20,441;CL:0000860,6.97e-20,42;CL:0002057,6.97e-20,42;CL:0000763,9.14e-20,108;CL:0000049,9.14e-20,108;CL:0000723,4.16e-19,433;CL:0002320,5.45e-15,361;CL:0000134,3.06e-14,354;CL:0000473,7.14e-14,48;CL:0000234,7.14e-14,48;CL:0002009,1.18e-13,61;CL:0000766,7.02e-13,72;CL:0002194,1.14e-12,59;CL:0000576,1.14e-12,59;CL:0000040,1.14e-12,59;CL:0000559,1.14e-12,59;CL:0000219,1.24e-11,386;CL:0000557,6.10e-11,67;CL:0000839,7.88e-10,66;CL:0000057,5.28e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;8.38e-15;42!CL:0000049;9.78e-07;108 | |ontology_enrichment_development_v019=CL:0002057;8.38e-15;42!CL:0000049;9.78e-07;108 | ||
|ontology_enrichment_disease=DOID:8692!7.35e-08!31 | |ontology_enrichment_disease=DOID:8692!7.35e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.31e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;1.31e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,7.35e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.02e-14!375;UBERON:0002204!1.24e-13!167;UBERON:0002390!8.83e-13!102;UBERON:0003061!8.83e-13!102;UBERON:0002193!2.84e-11!112;UBERON:0002371!5.85e-11!80;UBERON:0004765!2.70e-09!101;UBERON:0001434!2.70e-09!101;UBERON:0001474!3.41e-09!86;UBERON:0002405!8.42e-07!115 | |ontology_enrichment_uberon=UBERON:0002384!2.02e-14!375;UBERON:0002204!1.24e-13!167;UBERON:0002390!8.83e-13!102;UBERON:0003061!8.83e-13!102;UBERON:0002193!2.84e-11!112;UBERON:0002371!5.85e-11!80;UBERON:0004765!2.70e-09!101;UBERON:0001434!2.70e-09!101;UBERON:0001474!3.41e-09!86;UBERON:0002405!8.42e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.05e-15,315;UBERON:0004120,3.05e-15,315;UBERON:0006603,3.05e-15,315;UBERON:0002384,1.49e-14,371;UBERON:0002204,3.04e-14,167;UBERON:0002390,4.41e-13,98;UBERON:0003061,4.41e-13,98;UBERON:0002193,1.70e-11,108;UBERON:0002371,2.65e-11,76;UBERON:0001434,9.46e-10,100;UBERON:0001474,1.94e-09,82;UBERON:0004765,3.15e-09,90;UBERON:0002405,1.52e-08,93;UBERON:0003081,1.93e-08,203;UBERON:0000479,3.43e-08,773 | |||
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| ||
|short_description=p1@RNF24 | |short_description=p1@RNF24 | ||
}} | }} |
Revision as of 16:54, 19 November 2012
Short description: | p1@RNF24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF24_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000358395, ENST00000545616, NM_001134337, NM_001134338, uc002wki.2, uc002wkj.2_5end |
EntrezGene: | RNF24 |
HGNC: | 13779 |
UniProt: | Q9Y225 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 9.89e-21 | 427 |
stem cell | 2.62e-20 | 441 |
classical monocyte | 6.97e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.97e-20 | 42 |
myeloid cell | 9.14e-20 | 108 |
common myeloid progenitor | 9.14e-20 | 108 |
somatic stem cell | 4.16e-19 | 433 |
connective tissue cell | 5.45e-15 | 361 |
mesenchymal cell | 3.06e-14 | 354 |
defensive cell | 7.14e-14 | 48 |
phagocyte | 7.14e-14 | 48 |
macrophage dendritic cell progenitor | 1.18e-13 | 61 |
myeloid leukocyte | 7.02e-13 | 72 |
monopoietic cell | 1.14e-12 | 59 |
monocyte | 1.14e-12 | 59 |
monoblast | 1.14e-12 | 59 |
promonocyte | 1.14e-12 | 59 |
motile cell | 1.24e-11 | 386 |
granulocyte monocyte progenitor cell | 6.10e-11 | 67 |
myeloid lineage restricted progenitor cell | 7.88e-10 | 66 |
fibroblast | 5.28e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.05e-15 | 315 |
mesoderm-derived structure | 3.05e-15 | 315 |
presumptive mesoderm | 3.05e-15 | 315 |
connective tissue | 1.49e-14 | 371 |
musculoskeletal system | 3.04e-14 | 167 |
hematopoietic system | 4.41e-13 | 98 |
blood island | 4.41e-13 | 98 |
hemolymphoid system | 1.70e-11 | 108 |
bone marrow | 2.65e-11 | 76 |
skeletal system | 9.46e-10 | 100 |
bone element | 1.94e-09 | 82 |
skeletal element | 3.15e-09 | 90 |
immune system | 1.52e-08 | 93 |
lateral plate mesoderm | 1.93e-08 | 203 |
tissue | 3.43e-08 | 773 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.35e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.