FFCP PHASE1:Hg19::chr10:17243357..17243399,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000557!2.70e-27!71;CL:0002057!5.37e-27!42;CL:0000766!2.77e-26!76;CL:0000860!5.77e-26!45;CL:0002009!1.22e-24!65;CL:0000839!9.38e-24!70;CL:0002194!2.63e-23!63;CL:0000576!2.63e-23!63;CL:0000040!2.63e-23!63;CL:0000559!2.63e-23!63;CL:0000738!1.44e-20!140;CL:0002031!2.38e-16!124;CL:0002087!7.75e-16!119;CL:0000763!1.24e-15!112;CL:0000049!1.24e-15!112;CL:0000048!7.87e-15!430;CL:0000034!1.03e-14!444;CL:0000988!1.70e-14!182;CL:0000134!3.59e-14!358;CL:0000037!6.73e-14!172;CL:0000566!6.73e-14!172;CL:0000219!7.12e-14!390;CL:0000723!7.84e-14!436;CL:0002320!1.61e-13!365;CL:0002032!6.27e-12!165;CL:0000837!6.27e-12!165;CL:0002371!9.27e-10!591;CL:0000144!4.85e-09!625;CL:0002393!2.16e-07!9;CL:0002397!2.16e-07!9 | |ontology_enrichment_celltype=CL:0000557!2.70e-27!71;CL:0002057!5.37e-27!42;CL:0000766!2.77e-26!76;CL:0000860!5.77e-26!45;CL:0002009!1.22e-24!65;CL:0000839!9.38e-24!70;CL:0002194!2.63e-23!63;CL:0000576!2.63e-23!63;CL:0000040!2.63e-23!63;CL:0000559!2.63e-23!63;CL:0000738!1.44e-20!140;CL:0002031!2.38e-16!124;CL:0002087!7.75e-16!119;CL:0000763!1.24e-15!112;CL:0000049!1.24e-15!112;CL:0000048!7.87e-15!430;CL:0000034!1.03e-14!444;CL:0000988!1.70e-14!182;CL:0000134!3.59e-14!358;CL:0000037!6.73e-14!172;CL:0000566!6.73e-14!172;CL:0000219!7.12e-14!390;CL:0000723!7.84e-14!436;CL:0002320!1.61e-13!365;CL:0002032!6.27e-12!165;CL:0000837!6.27e-12!165;CL:0002371!9.27e-10!591;CL:0000144!4.85e-09!625;CL:0002393!2.16e-07!9;CL:0002397!2.16e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-40;33!CL:0002057;1.44e-40;33!CL:0000576;2.41e-32;48!CL:0000473;3.45e-29;39!CL:0000234;3.45e-29;39!CL:0000766;7.98e-24;69!CL:0000763;2.93e-11;100!CL:0002087;6.17e-11;104!CL:0002393;8.14e-11;6!CL:0002397;8.14e-11;6!CL:0000738;1.69e-09;136!CL:0000988;9.31e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;1.44e-40;33!CL:0002057;1.44e-40;33!CL:0000576;2.41e-32;48!CL:0000473;3.45e-29;39!CL:0000234;3.45e-29;39!CL:0000766;7.98e-24;69!CL:0000763;2.93e-11;100!CL:0002087;6.17e-11;104!CL:0002393;8.14e-11;6!CL:0002397;8.14e-11;6!CL:0000738;1.69e-09;136!CL:0000988;9.31e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-58,42;CL:0002057,1.76e-58,42;CL:0000473,1.30e-51,48;CL:0000234,1.30e-51,48;CL:0000766,2.39e-51,72;CL:0000557,9.75e-51,67;CL:0002009,2.82e-47,61;CL:0000839,6.87e-45,66;CL:0000738,8.78e-45,136;CL:0002194,2.40e-44,59;CL:0000576,2.40e-44,59;CL:0000040,2.40e-44,59;CL:0000559,2.40e-44,59;CL:0000037,1.43e-35,168;CL:0000763,1.48e-35,108;CL:0000049,1.48e-35,108;CL:0002031,5.62e-35,120;CL:0000988,9.87e-35,177;CL:0002087,6.53e-34,115;CL:0002032,2.99e-30,161;CL:0000837,2.99e-30,161;CL:0000134,2.97e-21,354;CL:0000219,5.70e-21,386;CL:0002320,2.73e-20,361;CL:0000034,5.62e-18,441;CL:0000048,2.31e-17,427;CL:0000723,1.03e-16,433;CL:0002393,1.49e-14,9;CL:0002397,1.49e-14,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-41;42!CL:0000049;2.86e-10;108 | |ontology_enrichment_development_v019=CL:0002057;2.57e-41;42!CL:0000049;2.86e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.16e-30!80;UBERON:0001474!6.33e-28!86;UBERON:0002193!1.40e-26!112;UBERON:0002390!3.49e-26!102;UBERON:0003061!3.49e-26!102;UBERON:0004765!1.83e-21!101;UBERON:0001434!1.83e-21!101;UBERON:0002405!1.41e-19!115;UBERON:0003081!1.11e-18!216;UBERON:0002204!2.78e-15!167;UBERON:0002384!1.43e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!1.16e-30!80;UBERON:0001474!6.33e-28!86;UBERON:0002193!1.40e-26!112;UBERON:0002390!3.49e-26!102;UBERON:0003061!3.49e-26!102;UBERON:0004765!1.83e-21!101;UBERON:0001434!1.83e-21!101;UBERON:0002405!1.41e-19!115;UBERON:0003081!1.11e-18!216;UBERON:0002204!2.78e-15!167;UBERON:0002384!1.43e-12!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-52,76;UBERON:0001474,2.58e-47,82;UBERON:0002390,2.41e-45,98;UBERON:0003061,2.41e-45,98;UBERON:0002405,1.37e-44,93;UBERON:0002193,2.95e-42,108;UBERON:0004765,1.82e-41,90;UBERON:0001434,1.73e-35,100;UBERON:0003081,2.23e-26,203;UBERON:0002204,1.39e-20,167;UBERON:0002384,1.31e-19,371;UBERON:0000926,6.49e-12,315;UBERON:0004120,6.49e-12,315;UBERON:0006603,6.49e-12,315 | |||
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| ||
|short_description=p2@TRDMT1 | |short_description=p2@TRDMT1 | ||
}} | }} |
Revision as of 05:05, 20 November 2012
Short description: | p2@TRDMT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRDMT1_5end |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | 27bp_to_ENST00000486947_5end |
EntrezGene: | TRDMT1 |
HGNC: | 2977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.76e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-58 | 42 |
defensive cell | 1.30e-51 | 48 |
phagocyte | 1.30e-51 | 48 |
myeloid leukocyte | 2.39e-51 | 72 |
granulocyte monocyte progenitor cell | 9.75e-51 | 67 |
macrophage dendritic cell progenitor | 2.82e-47 | 61 |
myeloid lineage restricted progenitor cell | 6.87e-45 | 66 |
leukocyte | 8.78e-45 | 136 |
monopoietic cell | 2.40e-44 | 59 |
monocyte | 2.40e-44 | 59 |
monoblast | 2.40e-44 | 59 |
promonocyte | 2.40e-44 | 59 |
hematopoietic stem cell | 1.43e-35 | 168 |
myeloid cell | 1.48e-35 | 108 |
common myeloid progenitor | 1.48e-35 | 108 |
hematopoietic lineage restricted progenitor cell | 5.62e-35 | 120 |
hematopoietic cell | 9.87e-35 | 177 |
nongranular leukocyte | 6.53e-34 | 115 |
hematopoietic oligopotent progenitor cell | 2.99e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.99e-30 | 161 |
mesenchymal cell | 2.97e-21 | 354 |
motile cell | 5.70e-21 | 386 |
connective tissue cell | 2.73e-20 | 361 |
stem cell | 5.62e-18 | 441 |
multi fate stem cell | 2.31e-17 | 427 |
somatic stem cell | 1.03e-16 | 433 |
intermediate monocyte | 1.49e-14 | 9 |
CD14-positive, CD16-positive monocyte | 1.49e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-52 | 76 |
bone element | 2.58e-47 | 82 |
hematopoietic system | 2.41e-45 | 98 |
blood island | 2.41e-45 | 98 |
immune system | 1.37e-44 | 93 |
hemolymphoid system | 2.95e-42 | 108 |
skeletal element | 1.82e-41 | 90 |
skeletal system | 1.73e-35 | 100 |
lateral plate mesoderm | 2.23e-26 | 203 |
musculoskeletal system | 1.39e-20 | 167 |
connective tissue | 1.31e-19 | 371 |
mesoderm | 6.49e-12 | 315 |
mesoderm-derived structure | 6.49e-12 | 315 |
presumptive mesoderm | 6.49e-12 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.