FFCP PHASE1:Hg19::chr13:48835377..48835496,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!3.76e-16!76;CL:0002057!2.39e-14!42;CL:0002009!1.80e-13!65;CL:0002194!3.31e-13!63;CL:0000576!3.31e-13!63;CL:0000040!3.31e-13!63;CL:0000559!3.31e-13!63;CL:0000557!1.26e-12!71;CL:0000839!3.00e-12!70;CL:0000860!7.86e-12!45 | |ontology_enrichment_celltype=CL:0000766!3.76e-16!76;CL:0002057!2.39e-14!42;CL:0002009!1.80e-13!65;CL:0002194!3.31e-13!63;CL:0000576!3.31e-13!63;CL:0000040!3.31e-13!63;CL:0000559!3.31e-13!63;CL:0000557!1.26e-12!71;CL:0000839!3.00e-12!70;CL:0000860!7.86e-12!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.02e-13;33!CL:0002057;5.02e-13;33!CL:0000473;1.82e-12;39!CL:0000234;1.82e-12;39!CL:0000576;6.64e-10;48!CL:0000766;3.47e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;5.02e-13;33!CL:0002057;5.02e-13;33!CL:0000473;1.82e-12;39!CL:0000234;1.82e-12;39!CL:0000576;6.64e-10;48!CL:0000766;3.47e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.68e-19,72;CL:0000473,4.47e-17,48;CL:0000234,4.47e-17,48;CL:0002009,9.06e-16,61;CL:0002194,1.66e-15,59;CL:0000576,1.66e-15,59;CL:0000040,1.66e-15,59;CL:0000559,1.66e-15,59;CL:0000557,4.14e-15,67;CL:0000860,6.82e-15,42;CL:0002057,6.82e-15,42;CL:0000839,1.38e-14,66;CL:0000763,9.99e-08,108;CL:0000049,9.99e-08,108;CL:0000738,1.02e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-11;42 | |ontology_enrichment_development_v019=CL:0002057;2.21e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-20!115;UBERON:0002390!6.69e-11!102;UBERON:0003061!6.69e-11!102;UBERON:0002371!1.20e-10!80;UBERON:0002193!1.52e-09!112;UBERON:0001474!2.21e-09!86;UBERON:0004765!2.48e-08!101;UBERON:0001434!2.48e-08!101;UBERON:0001049!5.35e-08!57;UBERON:0005068!5.35e-08!57;UBERON:0006241!5.35e-08!57;UBERON:0007135!5.35e-08!57 | |ontology_enrichment_uberon=UBERON:0007023!4.16e-20!115;UBERON:0002390!6.69e-11!102;UBERON:0003061!6.69e-11!102;UBERON:0002371!1.20e-10!80;UBERON:0002193!1.52e-09!112;UBERON:0001474!2.21e-09!86;UBERON:0004765!2.48e-08!101;UBERON:0001434!2.48e-08!101;UBERON:0001049!5.35e-08!57;UBERON:0005068!5.35e-08!57;UBERON:0006241!5.35e-08!57;UBERON:0007135!5.35e-08!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.35e-21,114;UBERON:0002390,5.29e-13,98;UBERON:0003061,5.29e-13,98;UBERON:0002371,5.81e-13,76;UBERON:0002193,1.38e-11,108;UBERON:0001474,1.78e-11,82;UBERON:0004765,1.02e-10,90;UBERON:0002405,5.83e-10,93;UBERON:0001434,8.83e-10,100;UBERON:0003081,1.25e-07,203;UBERON:0001049,1.41e-07,56;UBERON:0005068,1.41e-07,56;UBERON:0006241,1.41e-07,56;UBERON:0007135,1.41e-07,56 | |||
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| ||
|short_description=p5@ITM2B | |short_description=p5@ITM2B | ||
}} | }} |
Revision as of 03:25, 21 November 2012
Short description: | p5@ITM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ITM2B_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 104bp_to_ENST00000463839_5end |
EntrezGene: | ITM2B |
HGNC: | 6174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.68e-19 | 72 |
defensive cell | 4.47e-17 | 48 |
phagocyte | 4.47e-17 | 48 |
macrophage dendritic cell progenitor | 9.06e-16 | 61 |
monopoietic cell | 1.66e-15 | 59 |
monocyte | 1.66e-15 | 59 |
monoblast | 1.66e-15 | 59 |
promonocyte | 1.66e-15 | 59 |
granulocyte monocyte progenitor cell | 4.14e-15 | 67 |
classical monocyte | 6.82e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.82e-15 | 42 |
myeloid lineage restricted progenitor cell | 1.38e-14 | 66 |
myeloid cell | 9.99e-08 | 108 |
common myeloid progenitor | 9.99e-08 | 108 |
leukocyte | 1.02e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.35e-21 | 114 |
hematopoietic system | 5.29e-13 | 98 |
blood island | 5.29e-13 | 98 |
bone marrow | 5.81e-13 | 76 |
hemolymphoid system | 1.38e-11 | 108 |
bone element | 1.78e-11 | 82 |
skeletal element | 1.02e-10 | 90 |
immune system | 5.83e-10 | 93 |
skeletal system | 8.83e-10 | 100 |
lateral plate mesoderm | 1.25e-07 | 203 |
neural tube | 1.41e-07 | 56 |
neural rod | 1.41e-07 | 56 |
future spinal cord | 1.41e-07 | 56 |
neural keel | 1.41e-07 | 56 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.