FFCP PHASE1:Hg19::chr1:31712727..31712756,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79570 | |EntrezGene=79570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25743 | |HGNC=25743 | ||
|TSSclassifier=S | |||
|UniProt=B7Z5F5,Q4KMZ8 | |UniProt=B7Z5F5,Q4KMZ8 | ||
|association_with_transcript=0bp_to_NM_024522_5end | |association_with_transcript=0bp_to_NM_024522_5end |
Revision as of 16:35, 5 July 2013
Short description: | p1@NKAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NKAIN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_024522_5end |
EntrezGene: | NKAIN1 |
HGNC: | 25743 |
UniProt: | B7Z5F5Q4KMZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NKAIN1 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.61e-15 | 8 |
neuron | 2.73e-12 | 6 |
neuroblast | 2.73e-12 | 6 |
electrically signaling cell | 2.73e-12 | 6 |
embryonic stem cell | 4.29e-09 | 5 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 7.13e-70 | 89 |
central nervous system | 1.54e-66 | 81 |
neural tube | 2.62e-57 | 56 |
neural rod | 2.62e-57 | 56 |
future spinal cord | 2.62e-57 | 56 |
neural keel | 2.62e-57 | 56 |
regional part of nervous system | 2.08e-52 | 53 |
regional part of brain | 2.08e-52 | 53 |
brain | 1.96e-48 | 68 |
future brain | 1.96e-48 | 68 |
Showing 1 to 10 of 66 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.