FFCP PHASE1:Hg19::chr10:124254461..124254476,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:124254461..124254476,-|id=chr10:124254461..124254476,-|ontology_enrichment_celltype=CL:0000057!4.62e-20!75;CL:0002620!4.02e-16!23;CL:0000548!5.38e-14!679;CL:0000004!5.38e-14!679;CL:0000255!5.38e-14!679;CL:0000055!9.21e-14!180;CL:0000012!1.03e-13!682;CL:0002371!6.39e-11!591;CL:0000144!8.46e-11!625;CL:0000003!1.08e-10!722;CL:0002551!1.61e-08!6;CL:0000220!2.81e-08!246;CL:0002139!3.47e-08!24;CL:0002543!4.26e-08!6;CL:0002321!4.66e-08!248;CL:0000222!3.71e-07!119;CL:0000063!9.94e-07!578|ontology_enrichment_celltype_v019=CL:0002620;1.37e-13;23!CL:0002551;2.70e-13;6!CL:0002543;2.56e-12;6!CL:0002618;4.97e-10;3!CL:0000708;1.04e-09;3!CL:0002504;1.44e-09;3!CL:1000279;1.44e-09;3!CL:0002590;1.44e-09;3!CL:1000280;1.44e-09;3!CL:0002621;2.15e-09;3!CL:0002139;2.47e-08;24!CL:0000115;6.27e-08;36!CL:0002554;2.22e-07;2!CL:0000071;3.97e-07;18!CL:0002367;5.83e-07;2!CL:0000057;6.73e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-14,76;CL:0002620,7.30e-14,23;CL:0002551,1.95e-13,6;CL:0002543,2.46e-12,6;CL:0002618,5.99e-10,3;CL:0002590,1.00e-09,3;CL:0000708,1.03e-09,3;CL:0002504,1.61e-09,3;CL:1000279,1.61e-09,3;CL:1000280,1.61e-09,3;CL:0002621,2.42e-09,3;CL:0000115,2.85e-09,36;CL:0000222,1.01e-08,121;CL:0002139,2.58e-08,24;CL:0002554,1.74e-07,2;CL:0000071,4.21e-07,18;CL:0002546,4.21e-07,18;CL:0002367,5.10e-07,2;CL:0002078,6.52e-07,45|ontology_enrichment_development_v019=CL:0002546;3.97e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002200!2.86e-10!11;UBERON:0006876!2.86e-10!11;UBERON:0003102!9.52e-10!95;UBERON:0002097!1.63e-09!40;UBERON:0000914!5.04e-08!83;UBERON:0002329!5.04e-08!83;UBERON:0003077!5.04e-08!83;UBERON:0003059!5.04e-08!83;UBERON:0007282!5.04e-08!83;UBERON:0009618!5.04e-08!83;UBERON:0007285!5.04e-08!83;UBERON:0001444!5.57e-08!48;UBERON:0001737!7.36e-08!9;UBERON:0002199!1.00e-07!45;UBERON:0002416!1.00e-07!45;UBERON:0001638!1.08e-07!9;UBERON:0003920!1.08e-07!9;UBERON:0004582!1.08e-07!9;UBERON:0002067!5.18e-07!9;UBERON:0004016!5.18e-07!9;UBERON:0010083!5.18e-07!9;UBERON:0005284!8.39e-07!5|ontology_enrichment_uberon_v019=UBERON:0001828;1.69e-13;8!UBERON:0002067;4.94e-12;9!UBERON:0003210;1.04e-09;3!UBERON:0005284;1.35e-09;5!UBERON:0001949;2.15e-09;3!UBERON:0006876;4.26e-09;11!UBERON:0001638;4.30e-08;9!UBERON:0003920;4.30e-08;9!UBERON:0004582;4.30e-08;9!UBERON:0003729;5.16e-08;13!UBERON:0000165;1.68e-07;28!UBERON:0002097;2.19e-07;41!UBERON:0004638;3.97e-07;18!UBERON:0001986;3.97e-07;18!UBERON:0004852;3.97e-07;18!UBERON:0011137;5.72e-07;11!UBERON:0010323;5.72e-07;11!UBERON:0005969;5.83e-07;2!UBERON:0003956;5.83e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.76e-13,8;UBERON:0003102,7.23e-13,99;UBERON:0002067,3.82e-12,9;UBERON:0004016,3.82e-12,9;UBERON:0010083,3.82e-12,9;UBERON:0003210,1.03e-09,3;UBERON:0005284,1.13e-09,5;UBERON:0002097,1.20e-09,41;UBERON:0001949,2.42e-09,3;UBERON:0006876,3.54e-09,11;UBERON:0000486,3.61e-09,83;UBERON:0000033,9.86e-09,56;UBERON:0002199,2.78e-08,46;UBERON:0002416,2.78e-08,46;UBERON:0001638,4.19e-08,9;UBERON:0003920,4.19e-08,9;UBERON:0004582,4.19e-08,9;UBERON:0003729,5.28e-08,13;UBERON:0007503,6.40e-08,78;UBERON:0002329,6.48e-08,71;UBERON:0003059,6.48e-08,71;UBERON:0007282,6.48e-08,71;UBERON:0004290,6.48e-08,71;UBERON:0009618,6.48e-08,71;UBERON:0002049,7.95e-08,78;UBERON:0007798,7.95e-08,78;UBERON:0003077,9.43e-08,72;UBERON:0007285,9.43e-08,72;UBERON:0001444,9.49e-08,49;UBERON:0007524,1.36e-07,73;UBERON:0000153,1.48e-07,62;UBERON:0007811,1.48e-07,62;UBERON:0000165,3.44e-07,29;UBERON:0000930,3.44e-07,29;UBERON:0004638,4.21e-07,18;UBERON:0001986,4.21e-07,18;UBERON:0004852,4.21e-07,18;UBERON:0005969,5.10e-07,2;UBERON:0003956,5.10e-07,2;UBERON:0010323,6.41e-07,11|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0.286235987131057,0.273748850145768,1.00434111675842,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.966182642624386,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.04142150482278,0,0,0,0.417989933073621,2.32575083252396,1.42306505074684,0.33472061276467,2.81980521976403,0,0,0,0,2.23249320710199,2.46982309888787,3.37834441449967,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0.326923806226917,1.21085942115945,0.576175924479999,0.234321431833797,5.93104145977609,0.570471821544449,1.79338416662161,4.11020745253177,4.69431538667581,4.07307339436521,10.0035543914898,8.10706494257669,2.78979609174567,0,0,4.55080680969013,2.87447256726495,4.71341119071385,4.37914819551875,9.6972440419464,0.438977620880838,0,0.300476117813194,0,1.61450672119976,0,0.211931901159562,1.50045548042201,0.412210116953756,1.03056216018252,0,0.168776332241266,0,1.7670364197088,0.0920498986422993,0.323292113637624,1.77504796258307,0.604512589365842,0.508681776931463,1.35282597214308,1.09098448236334,3.72845974005705,0,0,0,0,0,0,0,1.28648187638577,0,0,5.77503585335668,0.236613600079688,0.505754070234305,0.241011029883482,0.220587945464788,0.435758888184812,0.949082476444386,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0.548751427043128,0,0,0,0.325808305310325,4.15973914111831,0,0,0.234817388471643,0.433099343283221,0,0,0,0,0,0,0,0,1.00789276919316,2.69372684760534,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,3.36393253036082,2.1798003441664,1.54010400223995,0.387815147273333,0,0.845302752556,0,0,0.771622122786426,2.83698264046557,1.3321108950805,0.57191197463259,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0,0,0,0,1.67737398844108,4.59447743336456,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0.207970861530807,1.24900292158013,0.157702415033935,0.702848489956279,0,0,0,0,0.184369168541703,0,2.54541504701563,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.328508624055237,0,0.581051892299796,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,4.08224892663638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,1.07452572308291,2.20538515975249,1.6113036730241,1.0151168573996,0.681813019328807,0,0,0,1.40373983744043,0.10115778085555,0,0,0,0,0,0,0,0,2.97726695487734,1.2655176988749,2.85945290885737,0.511795582622668,0,0,0,1.43897966066652,2.19629623788844,2.35624804691373,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,3.41525856389144,1.39973888097993,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,1.23337732182076,0.397429223405979,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,1.19271615249795,0.339936274560377,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.568209015825267,0.754703705257725,0,1.14420034198462,0.151230923763239,0,0,0.159296767163702,0,0,0,0.53168342911599,0,0,0,0,0,0.537052785212442,0.928067519756987,0,0.400027764663154,0.343395705182793,0.336749488765919,2.52369796457302,0,0,0,0,0.926089897295336,0,0,0,0,0.530067437837643,0.192914038270915,0.168942440653073,0,2.41801239211839,0.303859956177382,0,0,0,0,0,0,0,0,0,0,10.7828031177699,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.340853619036631,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:124254461..124254476,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:124254461..124254476,- | |||
|id=chr10:124254461..124254476,- | |||
|ontology_enrichment_celltype=CL:0000057!4.62e-20!75;CL:0002620!4.02e-16!23;CL:0000548!5.38e-14!679;CL:0000004!5.38e-14!679;CL:0000255!5.38e-14!679;CL:0000055!9.21e-14!180;CL:0000012!1.03e-13!682;CL:0002371!6.39e-11!591;CL:0000144!8.46e-11!625;CL:0000003!1.08e-10!722;CL:0002551!1.61e-08!6;CL:0000220!2.81e-08!246;CL:0002139!3.47e-08!24;CL:0002543!4.26e-08!6;CL:0002321!4.66e-08!248;CL:0000222!3.71e-07!119;CL:0000063!9.94e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.37e-13;23!CL:0002551;2.70e-13;6!CL:0002543;2.56e-12;6!CL:0002618;4.97e-10;3!CL:0000708;1.04e-09;3!CL:0002504;1.44e-09;3!CL:1000279;1.44e-09;3!CL:0002590;1.44e-09;3!CL:1000280;1.44e-09;3!CL:0002621;2.15e-09;3!CL:0002139;2.47e-08;24!CL:0000115;6.27e-08;36!CL:0002554;2.22e-07;2!CL:0000071;3.97e-07;18!CL:0002367;5.83e-07;2!CL:0000057;6.73e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-14,76;CL:0002620,7.30e-14,23;CL:0002551,1.95e-13,6;CL:0002543,2.46e-12,6;CL:0002618,5.99e-10,3;CL:0002590,1.00e-09,3;CL:0000708,1.03e-09,3;CL:0002504,1.61e-09,3;CL:1000279,1.61e-09,3;CL:1000280,1.61e-09,3;CL:0002621,2.42e-09,3;CL:0000115,2.85e-09,36;CL:0000222,1.01e-08,121;CL:0002139,2.58e-08,24;CL:0002554,1.74e-07,2;CL:0000071,4.21e-07,18;CL:0002546,4.21e-07,18;CL:0002367,5.10e-07,2;CL:0002078,6.52e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.97e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.86e-10!11;UBERON:0006876!2.86e-10!11;UBERON:0003102!9.52e-10!95;UBERON:0002097!1.63e-09!40;UBERON:0000914!5.04e-08!83;UBERON:0002329!5.04e-08!83;UBERON:0003077!5.04e-08!83;UBERON:0003059!5.04e-08!83;UBERON:0007282!5.04e-08!83;UBERON:0009618!5.04e-08!83;UBERON:0007285!5.04e-08!83;UBERON:0001444!5.57e-08!48;UBERON:0001737!7.36e-08!9;UBERON:0002199!1.00e-07!45;UBERON:0002416!1.00e-07!45;UBERON:0001638!1.08e-07!9;UBERON:0003920!1.08e-07!9;UBERON:0004582!1.08e-07!9;UBERON:0002067!5.18e-07!9;UBERON:0004016!5.18e-07!9;UBERON:0010083!5.18e-07!9;UBERON:0005284!8.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.69e-13;8!UBERON:0002067;4.94e-12;9!UBERON:0003210;1.04e-09;3!UBERON:0005284;1.35e-09;5!UBERON:0001949;2.15e-09;3!UBERON:0006876;4.26e-09;11!UBERON:0001638;4.30e-08;9!UBERON:0003920;4.30e-08;9!UBERON:0004582;4.30e-08;9!UBERON:0003729;5.16e-08;13!UBERON:0000165;1.68e-07;28!UBERON:0002097;2.19e-07;41!UBERON:0004638;3.97e-07;18!UBERON:0001986;3.97e-07;18!UBERON:0004852;3.97e-07;18!UBERON:0011137;5.72e-07;11!UBERON:0010323;5.72e-07;11!UBERON:0005969;5.83e-07;2!UBERON:0003956;5.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.76e-13,8;UBERON:0003102,7.23e-13,99;UBERON:0002067,3.82e-12,9;UBERON:0004016,3.82e-12,9;UBERON:0010083,3.82e-12,9;UBERON:0003210,1.03e-09,3;UBERON:0005284,1.13e-09,5;UBERON:0002097,1.20e-09,41;UBERON:0001949,2.42e-09,3;UBERON:0006876,3.54e-09,11;UBERON:0000486,3.61e-09,83;UBERON:0000033,9.86e-09,56;UBERON:0002199,2.78e-08,46;UBERON:0002416,2.78e-08,46;UBERON:0001638,4.19e-08,9;UBERON:0003920,4.19e-08,9;UBERON:0004582,4.19e-08,9;UBERON:0003729,5.28e-08,13;UBERON:0007503,6.40e-08,78;UBERON:0002329,6.48e-08,71;UBERON:0003059,6.48e-08,71;UBERON:0007282,6.48e-08,71;UBERON:0004290,6.48e-08,71;UBERON:0009618,6.48e-08,71;UBERON:0002049,7.95e-08,78;UBERON:0007798,7.95e-08,78;UBERON:0003077,9.43e-08,72;UBERON:0007285,9.43e-08,72;UBERON:0001444,9.49e-08,49;UBERON:0007524,1.36e-07,73;UBERON:0000153,1.48e-07,62;UBERON:0007811,1.48e-07,62;UBERON:0000165,3.44e-07,29;UBERON:0000930,3.44e-07,29;UBERON:0004638,4.21e-07,18;UBERON:0001986,4.21e-07,18;UBERON:0004852,4.21e-07,18;UBERON:0005969,5.10e-07,2;UBERON:0003956,5.10e-07,2;UBERON:0010323,6.41e-07,11 | |||
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|short_description=p@chr10:124254461..124254476,- | |||
}} |
Revision as of 12:08, 10 September 2013
Short description: | p@chr10:124254461..124254476, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:124254461..124254476, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-14 | 76 |
skin fibroblast | 7.30e-14 | 23 |
fibroblast of dermis | 1.95e-13 | 6 |
vein endothelial cell | 2.46e-12 | 6 |
endothelial cell of umbilical vein | 5.99e-10 | 3 |
smooth muscle cell of the brain vasculature | 1.00e-09 | 3 |
leptomeningeal cell | 1.03e-09 | 3 |
enteric smooth muscle cell | 1.61e-09 | 3 |
smooth muscle cell of large intestine | 1.61e-09 | 3 |
smooth muscle cell of colon | 1.61e-09 | 3 |
gingival epithelial cell | 2.42e-09 | 3 |
endothelial cell | 2.85e-09 | 36 |
mesodermal cell | 1.01e-08 | 121 |
endothelial cell of vascular tree | 2.58e-08 | 24 |
fibroblast of lymphatic vessel | 1.74e-07 | 2 |
blood vessel endothelial cell | 4.21e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.21e-07 | 18 |
trabecular meshwork cell | 5.10e-07 | 2 |
meso-epithelial cell | 6.52e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.