FFCP PHASE1:Hg19::chr10:28591933..28591966,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=143098|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26542|TSSclassifier=S|UniProt=B4DWL9|association_with_transcript=28bp_to_ENST00000445954,uc009xla.2,uc010qdv.1_5end|description=CAGE_peak_1_at_MPP7_5end|id=chr10:28591933..28591966,-|ontology_enrichment_celltype=CL:0002057!9.49e-22!42;CL:0000860!3.32e-20!45;CL:0000738!3.95e-16!140;CL:0002087!7.62e-15!119;CL:0000766!1.88e-14!76;CL:0002009!3.62e-14!65;CL:0002194!2.57e-13!63;CL:0000576!2.57e-13!63;CL:0000040!2.57e-13!63;CL:0000559!2.57e-13!63;CL:0002031!4.93e-13!124;CL:0000557!4.67e-12!71;CL:0000037!8.37e-12!172;CL:0000566!8.37e-12!172;CL:0000839!4.01e-11!70;CL:0002032!7.64e-11!165;CL:0000837!7.64e-11!165;CL:0000988!1.68e-10!182;CL:0000763!6.38e-09!112;CL:0000049!6.38e-09!112;CL:0000791!2.57e-07!18;CL:0000789!2.57e-07!18;CL:0002420!2.57e-07!18;CL:0002419!2.57e-07!18;CL:0000790!2.57e-07!18|ontology_enrichment_celltype_v019=CL:0000860;1.37e-19;33!CL:0002057;1.37e-19;33!CL:0000473;4.16e-14;39!CL:0000234;4.16e-14;39!CL:0000576;2.10e-13;48!CL:0000766;7.72e-09;69!CL:0000791;2.38e-08;18!CL:0000789;2.38e-08;18!CL:0002419;2.38e-08;18!CL:0002087;3.19e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,2.46e-24,42;CL:0002057,2.46e-24,42;CL:0000473,4.07e-21,48;CL:0000234,4.07e-21,48;CL:0000738,4.51e-18,136;CL:0002087,2.94e-17,115;CL:0000766,7.82e-16,72;CL:0002009,1.28e-15,61;CL:0002031,3.80e-15,120;CL:0002194,1.20e-14,59;CL:0000576,1.20e-14,59;CL:0000040,1.20e-14,59;CL:0000559,1.20e-14,59;CL:0000037,3.31e-14,168;CL:0000557,4.12e-13,67;CL:0000988,5.05e-13,177;CL:0002032,5.79e-13,161;CL:0000837,5.79e-13,161;CL:0000839,4.77e-12,66;CL:0000763,4.48e-10,108;CL:0000049,4.48e-10,108;CL:0000791,2.56e-08,18;CL:0000789,2.56e-08,18;CL:0002420,2.56e-08,18;CL:0002419,2.56e-08,18;CL:0000790,2.56e-08,18|ontology_enrichment_development_v019=CL:0002057;8.17e-18;42!CL:0000790;2.38e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.01e-21!115;UBERON:0002390!7.98e-15!102;UBERON:0003061!7.98e-15!102;UBERON:0002193!4.37e-12!112;UBERON:0002371!5.06e-10!80;UBERON:0001474!7.06e-09!86;UBERON:0004765!4.74e-07!101;UBERON:0001434!4.74e-07!101;UBERON:0000178!7.86e-07!15;UBERON:0000179!7.86e-07!15;UBERON:0000463!7.86e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.11e-07;15!UBERON:0000179;4.11e-07;15!UBERON:0000463;4.11e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-20,114;UBERON:0002390,4.02e-16,98;UBERON:0003061,4.02e-16,98;UBERON:0002193,2.60e-13,108;UBERON:0002371,4.30e-11,76;UBERON:0001474,9.22e-10,82;UBERON:0004765,3.22e-09,90;UBERON:0002405,7.65e-09,93;UBERON:0001434,4.72e-07,100;UBERON:0000178,5.38e-07,15;UBERON:0000179,5.38e-07,15;UBERON:0000463,5.38e-07,15|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0.737201809504527,0.697801167972428,0.655324116390517,0,0.866364470720326,1.65698687863958,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,1.25542639594803,0.0764134057479513,0,0,10.2274711980715,28.4033754591937,23.0676023740953,1.83884244895785,1.204823675113,2.58827807116751,0,0.142169232487422,4.9912074686924,32.6857291033808,35.2958227547449,41.8830980481594,1.34349284543955,2.91504299417082,0.77272670290256,18.4655763250047,16.2486655786188,19.6493089562131,20.9186133215116,18.5025549609822,17.3435567701258,16.9738511470069,33.044731142254,20.5739540003069,36.8877878388182,27.7558413941045,33.8566216485854,20.5184150101439,12.5536829026609,10.562003768919,31.8327248065739,25.3533931390114,15.344091019177,22.7597397128834,24.1351025722175,20.885012776102,24.3775760448011,26.0997203357924,16.8162007228805,20.6023905510529,30.7674921867919,19.3298071787554,26.0321786132349,24.3063239751793,18.0383560841304,7.39393502091796,9.35458919846192,9.64429769338529,42.6848798356681,39.3463459244747,43.0744572348175,2.56511469367124,4.37616689837998,3.47061892152804,5.27988733383968,2.73069305631066,4.44754626931777,2.98711155796555,2.00197993518006,4.59801951963587,4.62731410949403,1.90810750907073,8.53819453664173,8.80855784056408,10.7036503875064,21.1474125726441,16.8152568894461,7.37475437370216,25.1788505745706,22.0086027139532,18.9153379079548,0.167186495390678,25.0960145307865,20.8317034523283,37.0170783975031,0.111410456885174,3.53527088969805,5.09527957542329,3.79125409271022,0.25618263945135,0.130059347559878,4.60426132890293,1.65810010671509,5.506258628966,37.6647870431633,42.003910010085,42.8595647600405,0.226618685395132,13.0294967824653,12.026960591892,14.4221224451117,12.7426165729639,11.0684187155591,11.4054245333805,15.0575119077773,17.0222192835376,13.742379920758,12.0756398542449,10.6746639599736,18.7494271199001,18.1859333132785,20.5650653513575,0,0,0.255725123687061,1.0843174571537,0.50133791063589,2.17269778441236,0,0,1.70162670895322,1.33037638477538,1.84453049955565,5.82856885964821,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=143098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26542 | |||
|TSSclassifier=S | |||
|UniProt=B4DWL9 | |||
|association_with_transcript=28bp_to_ENST00000445954,uc009xla.2,uc010qdv.1_5end | |||
|description=CAGE_peak_1_at_MPP7_5end | |||
|id=chr10:28591933..28591966,- | |||
|ontology_enrichment_celltype=CL:0002057!9.49e-22!42;CL:0000860!3.32e-20!45;CL:0000738!3.95e-16!140;CL:0002087!7.62e-15!119;CL:0000766!1.88e-14!76;CL:0002009!3.62e-14!65;CL:0002194!2.57e-13!63;CL:0000576!2.57e-13!63;CL:0000040!2.57e-13!63;CL:0000559!2.57e-13!63;CL:0002031!4.93e-13!124;CL:0000557!4.67e-12!71;CL:0000037!8.37e-12!172;CL:0000566!8.37e-12!172;CL:0000839!4.01e-11!70;CL:0002032!7.64e-11!165;CL:0000837!7.64e-11!165;CL:0000988!1.68e-10!182;CL:0000763!6.38e-09!112;CL:0000049!6.38e-09!112;CL:0000791!2.57e-07!18;CL:0000789!2.57e-07!18;CL:0002420!2.57e-07!18;CL:0002419!2.57e-07!18;CL:0000790!2.57e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-19;33!CL:0002057;1.37e-19;33!CL:0000473;4.16e-14;39!CL:0000234;4.16e-14;39!CL:0000576;2.10e-13;48!CL:0000766;7.72e-09;69!CL:0000791;2.38e-08;18!CL:0000789;2.38e-08;18!CL:0002419;2.38e-08;18!CL:0002087;3.19e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.46e-24,42;CL:0002057,2.46e-24,42;CL:0000473,4.07e-21,48;CL:0000234,4.07e-21,48;CL:0000738,4.51e-18,136;CL:0002087,2.94e-17,115;CL:0000766,7.82e-16,72;CL:0002009,1.28e-15,61;CL:0002031,3.80e-15,120;CL:0002194,1.20e-14,59;CL:0000576,1.20e-14,59;CL:0000040,1.20e-14,59;CL:0000559,1.20e-14,59;CL:0000037,3.31e-14,168;CL:0000557,4.12e-13,67;CL:0000988,5.05e-13,177;CL:0002032,5.79e-13,161;CL:0000837,5.79e-13,161;CL:0000839,4.77e-12,66;CL:0000763,4.48e-10,108;CL:0000049,4.48e-10,108;CL:0000791,2.56e-08,18;CL:0000789,2.56e-08,18;CL:0002420,2.56e-08,18;CL:0002419,2.56e-08,18;CL:0000790,2.56e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;8.17e-18;42!CL:0000790;2.38e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.01e-21!115;UBERON:0002390!7.98e-15!102;UBERON:0003061!7.98e-15!102;UBERON:0002193!4.37e-12!112;UBERON:0002371!5.06e-10!80;UBERON:0001474!7.06e-09!86;UBERON:0004765!4.74e-07!101;UBERON:0001434!4.74e-07!101;UBERON:0000178!7.86e-07!15;UBERON:0000179!7.86e-07!15;UBERON:0000463!7.86e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.11e-07;15!UBERON:0000179;4.11e-07;15!UBERON:0000463;4.11e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-20,114;UBERON:0002390,4.02e-16,98;UBERON:0003061,4.02e-16,98;UBERON:0002193,2.60e-13,108;UBERON:0002371,4.30e-11,76;UBERON:0001474,9.22e-10,82;UBERON:0004765,3.22e-09,90;UBERON:0002405,7.65e-09,93;UBERON:0001434,4.72e-07,100;UBERON:0000178,5.38e-07,15;UBERON:0000179,5.38e-07,15;UBERON:0000463,5.38e-07,15 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0.737201809504527,0.697801167972428,0.655324116390517,0,0.866364470720326,1.65698687863958,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,1.25542639594803,0.0764134057479513,0,0,10.2274711980715,28.4033754591937,23.0676023740953,1.83884244895785,1.204823675113,2.58827807116751,0,0.142169232487422,4.9912074686924,32.6857291033808,35.2958227547449,41.8830980481594,1.34349284543955,2.91504299417082,0.77272670290256,18.4655763250047,16.2486655786188,19.6493089562131,20.9186133215116,18.5025549609822,17.3435567701258,16.9738511470069,33.044731142254,20.5739540003069,36.8877878388182,27.7558413941045,33.8566216485854,20.5184150101439,12.5536829026609,10.562003768919,31.8327248065739,25.3533931390114,15.344091019177,22.7597397128834,24.1351025722175,20.885012776102,24.3775760448011,26.0997203357924,16.8162007228805,20.6023905510529,30.7674921867919,19.3298071787554,26.0321786132349,24.3063239751793,18.0383560841304,7.39393502091796,9.35458919846192,9.64429769338529,42.6848798356681,39.3463459244747,43.0744572348175,2.56511469367124,4.37616689837998,3.47061892152804,5.27988733383968,2.73069305631066,4.44754626931777,2.98711155796555,2.00197993518006,4.59801951963587,4.62731410949403,1.90810750907073,8.53819453664173,8.80855784056408,10.7036503875064,21.1474125726441,16.8152568894461,7.37475437370216,25.1788505745706,22.0086027139532,18.9153379079548,0.167186495390678,25.0960145307865,20.8317034523283,37.0170783975031,0.111410456885174,3.53527088969805,5.09527957542329,3.79125409271022,0.25618263945135,0.130059347559878,4.60426132890293,1.65810010671509,5.506258628966,37.6647870431633,42.003910010085,42.8595647600405,0.226618685395132,13.0294967824653,12.026960591892,14.4221224451117,12.7426165729639,11.0684187155591,11.4054245333805,15.0575119077773,17.0222192835376,13.742379920758,12.0756398542449,10.6746639599736,18.7494271199001,18.1859333132785,20.5650653513575,0,0,0.255725123687061,1.0843174571537,0.50133791063589,2.17269778441236,0,0,1.70162670895322,1.33037638477538,1.84453049955565,5.82856885964821,0,1.85392221392215,0.97364218096405,0.870648686496336,0,1.90792499444274,4.0039643754609,1.11437250398869,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,1.22031028774085,0,0,0.625098097988558,0.898117490504679,0.900891843866578,0,0,0,13.1780417436063,27.1446184903828,1.3082821564276,0,0.633152558322899,0,0,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,1.29177948508141,4.37056949793955,3.79217178096071,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.625592599359821,0,0,0.30648779579902,0.150238058906597,0.453728732640084,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.969876340912871,0,0.10075209822764,0.169560592310488,1.15956511897978,1.63647672354501,0.860413786167011,1.82960559194393,2.38553582978673,2.20768491452085,2.28054321033815,0.504641701751257,4.37972830890996,1.56449532329816,0,0,1.39310378409594,0,1.8929088006375,1.01150814046861,0.723033089650446,0.661763836394364,1.52515610864684,2.60997681022206,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,2.53510069643662,2.94848165003288,1.77236972004421,0,7.37930631258681,0.343135620597051,3.07300799144152,0,0.904760751704678,4.0738915869753,0.325808305310325,0,0,1.15930404975077,1.17408694235822,0.144366447761074,0,0.951270761172991,16.5942923571448,10.3018339451385,0.246217006087397,1.17002132569619,1.48631162288728,2.81201501960331,1.6798212819886,1.41775097242386,2.50763863567975,2.3250715081117,2.30029607499127,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.258543431515556,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,0.599837947092342,1.2162378064119,0.502257091432126,2.10833939483032,2.39624855491583,10.3375742250703,0,0.579125226670317,0.410952645100767,0.358121926479791,0,17.5357376579715,14.4470475155877,15.2728213172901,0.76228387266739,2.60279707715243,0.773288812777695,0.335032530668698,1.91381625495949,25.4662388142042,32.9077605124427,25.2793463195982,2.57652132610194,1.50051156317903,0.271265023699736,0.207970861530807,0,0.315404830067869,0.117141414992713,0.902838299183157,0,0,2.65690239414175,0.921845842708516,0,0.391602314925481,0,24.3986270825007,31.0628449178808,23.2666076011509,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,12.5693827575287,3.00759705454927,6.07734526976916,0.114814448164607,0.728364672026868,0,0.451199612907412,0.693138033939733,0,0,0.422206515571503,1.13733384070897,0,0,0,0,0,0.764628819135115,0.831076008928724,0,3.50815802633495,2.0914836081992,0.769350375349168,0,0.976135183992909,11.5405933045449,0.183138929636687,0.0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| |||
|short_description=p1@MPP7 | |||
}} |
Revision as of 13:02, 10 September 2013
Short description: | p1@MPP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MPP7_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000445954, uc009xla.2, uc010qdv.1_5end |
EntrezGene: | MPP7 |
HGNC: | 26542 |
UniProt: | B4DWL9 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.46e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.46e-24 | 42 |
defensive cell | 4.07e-21 | 48 |
phagocyte | 4.07e-21 | 48 |
leukocyte | 4.51e-18 | 136 |
nongranular leukocyte | 2.94e-17 | 115 |
myeloid leukocyte | 7.82e-16 | 72 |
macrophage dendritic cell progenitor | 1.28e-15 | 61 |
hematopoietic lineage restricted progenitor cell | 3.80e-15 | 120 |
monopoietic cell | 1.20e-14 | 59 |
monocyte | 1.20e-14 | 59 |
monoblast | 1.20e-14 | 59 |
promonocyte | 1.20e-14 | 59 |
hematopoietic stem cell | 3.31e-14 | 168 |
granulocyte monocyte progenitor cell | 4.12e-13 | 67 |
hematopoietic cell | 5.05e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.79e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.79e-13 | 161 |
myeloid lineage restricted progenitor cell | 4.77e-12 | 66 |
myeloid cell | 4.48e-10 | 108 |
common myeloid progenitor | 4.48e-10 | 108 |
mature alpha-beta T cell | 2.56e-08 | 18 |
alpha-beta T cell | 2.56e-08 | 18 |
immature T cell | 2.56e-08 | 18 |
mature T cell | 2.56e-08 | 18 |
immature alpha-beta T cell | 2.56e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.27e-20 | 114 |
hematopoietic system | 4.02e-16 | 98 |
blood island | 4.02e-16 | 98 |
hemolymphoid system | 2.60e-13 | 108 |
bone marrow | 4.30e-11 | 76 |
bone element | 9.22e-10 | 82 |
skeletal element | 3.22e-09 | 90 |
immune system | 7.65e-09 | 93 |
skeletal system | 4.72e-07 | 100 |
blood | 5.38e-07 | 15 |
haemolymphatic fluid | 5.38e-07 | 15 |
organism substance | 5.38e-07 | 15 |
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