FFCP PHASE1:Hg19::chr10:33623764..33623777,-: Difference between revisions
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{{FFCP | 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0,6.52499617891314,2.38966241399549,1.27126825146383,0,1.03423011972439,3.49925536059905,0.694499979733169,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0.10893846351899,2.78847488557207,5.61736887077719,11.9639158639351,1.1528195219403,0,2.82483166997221,0,2.93112298885959,0,0,2.98262487150547,0.166211681900156,0,0,0,0,0,1.05499032264014,0.652931232636591,2.40300221437699,0,1.99052386215701,1.85760885457012,1.22206028986725,0.296521128680622,0.123563938946503,0,0.134802265961354,11.236087062183,0,0,0.391329237864179,0.242780379534093,2.36750641709634,6.04953580243319,4.28501866282686,3.91756793696625,0,0.933193722575224,3.32326936353593,0.330991955875499,2.19753042885058,1.19472429772959,0,0.554698692052555,0,0.587954384486266,0.435296032902013,1.7472666824203,11.5230641755983,0.19351266257817,1.46178634172371,0.656923656425674,1.06687918137261,0,4.97157629717171,21.3785402448931,11.1280182553674,0.379864775735272,0.195551382734803,6.01191151886503,1.06726497369676,1.39866726707491,1.44090417154106,0,0.343189995723929,4.60975353562079,3.23056592470125,0.471388069233591,21.6087687657046,12.55234155748,5.09991088181609,3.46740707881823,0,0,0,4.72741985561953,0,2.23425921017803,2.7499250881402,5.74298419661451,2.59582700648688,5.15071257763885,1.56220020209311,4.36692571163721,7.56629755439048,2.32991899054908,0.393915911536118,0.247247575143499,0.26961417541674,6.00407637239968,0,9.54275627771164,2.86027152834309,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.668245123238271,3.68978156359193,5.43759380364467,4.93073128468982,8.1312259119943,0.179287339332845,5.18171032762502,10.0057345692271,9.93137955548147,10.9335471191542,7.05899482279827,3.45688596480507,8.81785872295405,5.98650957812437,1.31348033198942,13.2902656992629,6.34547712512704,2.19828350517124,3.97520666736664,0.517131825446202,0,5.13260513652988,3.52407511158336,3.09683496446315,2.20086027139532,5.38510771951354,2.97699613087171,0,0,1.91502377331055,3.26410682021684,1.5041393641362,0.612691153526923,0.655745261419609,0,0,1.09823638411767,0.751145584238999,1.14681839138014,0.221858103073705,0.745156835296601,0.138348634936231,3.37447101497688,0.758245587708239,0.285465333544967,8.70483532883235,1.40500471742064,3.33318365804898,2.08956724041624,2.57084640831947,3.32883516901568,1.13641803165053,2.0125432140206,5.33886732957922,4.34796129954155,2.41969478021182,3.57505561340395,4.28779934969938,5.09749654923848,26.0885805054891,5.27894053379282,12.8558924430665,4.78515086204391,14.0871166689168,2.40412174395549,5.71207818253193,2.44122439922797,6.00100575368446,2.47044281197723,12.5289115167193,13.5352602157529,1.60011105865261,6.18112269329027,3.36749488765919,7.57109389371906,5.39335525140449,1.92997432237433,0.521988583930423,2.04035332961045,0.463044948647668,1.22368352253234,3.40268798054826,1.54400723580486,2.41212454536578,0.706756583783524,0.578742114812744,4.05461857567374,1.02496607435179,0.690860683462397,0.607719912354764,0.414775308455192,0,0,0,0.982829546539238,11.3055538026711,28.9497609001319,0,1.06691729694141,0,29.5108295854755,4.41854280604418,0.139879507719444,0.622077260032973,3.06946491128764,5.82253981542082,4.4034463719651,1.31051565830417,1.69732529954025,2.76347396132188,1.48722917110803,1.67593475391973,19.716269740512,0.0788617450012534,2.40171224485641,12.6963339728646,0,0.513833800771676,4.25089728976755,0.478901577171454,0.82046545696302,9.32665276020357,0.345786262321089,0.807378228159255,1.42769420259154,0,1.06172751012966,2.20114318226015,0.346576998451015,3.05105676373734,18.6397180036227,0.397832444232549,2.78278214892252,15.531290290171,1.56302802246618,0,1.14640342257068,6.80137996598408,0.945526184657525,1.56215619722769,1.2401207790071,0.760989722326882,6.56369770821863,1.09651553371436,0,0.175871244359621,1.02209942111676,0,0.672567444437648,0.606965604236632,1.82129753081038,3.90290428715611,0,8.23142445299609,0.611727596791485,0.789273282754189,4.37317211270682,35.371585801678,2.90424443546902,0.157115589916002,0,6.39211104356647,5.39818978046554,3.8220135030964,2.43020250200632,0,10.5779697084994,0,16.0342272946051,3.10824246244555,1.3657478167516,0,0.430227358820278,9.58489205917579,7.58399302356503,4.23387050190929,0.9164274741762,1.24082554265728,5.7332336338646,0,0.490751168076215,0,1.94228651156368,0.718639647993729,8.11870101936739,5.34282092365053,0.233939463462106,1.19370465096821,0,0.11294608203896,0,4.52888530700021,1.54348316215889,4.5897507705831,0.940634592723046,0.980593287015622,1.64973582971138,2.94462700672418,0,4.226557275834,10.195626881269,5.16911548889195,4.83434159801829,0,0.535661815816973,10.5868461514708,1.7653100671617,9.49437304720472,0,0.143339583151451,4.73314686579554,0.679914901909147,6.10890966476528,4.7612415646386,2.97596014533401,0.462175628631418,1.29787968637137,0.252332849670158,0.98339014767326,6.96841755562903,0,0.26721740526556,0,0,2.5006970412019,0.535928260312357,2.48750831837634,0.20686599172379,0.852935927603924,11.903221573187,0.322944549180031,1.24149428591716,3.3639558774184,1.33659032384146,6.46775004666302,0.870866991587845,6.50243272062034,0.673520530145875,1.2192774916755,8.98182962674236,3.74455035610483,1.17400080465487,44.4066249259962,6.8267153601006,0,4.03396765803459,13.0206777061036,0.665756774185513,2.21401172950129,0|short_description=p6@NRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |||
|TSSclassifier=S | |||
|UniProt=Q5T7F0 | |||
|association_with_transcript=0bp_to_uc001iwv.3,uc001iww.3,uc001ixb.1,uc009xlz.2_5end | |||
|coexpression_cluster_id=C2059 | |||
|description=CAGE_peak_6_at_NRP1_5end | |||
|id=chr10:33623764..33623777,- | |||
|ontology_enrichment_celltype=CL:0000055!8.10e-19!180;CL:0000057!3.41e-12!75;CL:0000680!1.85e-10!57;CL:0000056!1.85e-10!57;CL:0000355!1.85e-10!57;CL:0000222!5.53e-10!119;CL:0000187!1.15e-09!54;CL:0000183!1.20e-09!59;CL:0000393!2.29e-09!60;CL:0000211!2.29e-09!60;CL:0000220!2.69e-07!246;CL:0002321!4.52e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.80e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.04e-12,76;CL:0000680,1.43e-11,58;CL:0000056,1.43e-11,58;CL:0000355,1.43e-11,58;CL:0000187,1.04e-10,55;CL:0000393,4.28e-10,61;CL:0000211,4.28e-10,61;CL:0000222,1.69e-09,121;CL:0000192,2.72e-07,43;CL:0000514,2.72e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;5.15e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.75e-14!659;UBERON:0005256!1.72e-13!143;UBERON:0002100!2.05e-13!216;UBERON:0000914!6.40e-13!83;UBERON:0002329!6.40e-13!83;UBERON:0003077!6.40e-13!83;UBERON:0003059!6.40e-13!83;UBERON:0007282!6.40e-13!83;UBERON:0009618!6.40e-13!83;UBERON:0007285!6.40e-13!83;UBERON:0000475!6.76e-13!365;UBERON:0004290!1.29e-11!70;UBERON:0000467!1.41e-11!625;UBERON:0000480!2.61e-11!626;UBERON:0001134!5.40e-11!61;UBERON:0002036!5.40e-11!61;UBERON:0003082!5.40e-11!61;UBERON:0000486!1.05e-10!82;UBERON:0002385!1.15e-10!63;UBERON:0001015!1.15e-10!63;UBERON:0000383!1.15e-10!63;UBERON:0000481!3.81e-10!347;UBERON:0000490!3.83e-10!138;UBERON:0003104!3.99e-09!238;UBERON:0009142!3.99e-09!238;UBERON:0003914!9.16e-09!118;UBERON:0000119!1.15e-08!312;UBERON:0002049!1.79e-08!79;UBERON:0007798!1.79e-08!79;UBERON:0000483!2.25e-08!309;UBERON:0000922!3.91e-08!612;UBERON:0002050!4.03e-08!605;UBERON:0005423!4.03e-08!605;UBERON:0000923!7.98e-08!604;UBERON:0005291!7.98e-08!604;UBERON:0006598!7.98e-08!604;UBERON:0002532!7.98e-08!604;UBERON:0004872!7.98e-08!84;UBERON:0003102!3.03e-07!95;UBERON:0000477!4.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.99e-08;31!UBERON:0001015;4.99e-08;31!UBERON:0000383;4.99e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.78e-15,160;UBERON:0009142,5.78e-15,160;UBERON:0005256,7.71e-13,122;UBERON:0002329,1.62e-12,71;UBERON:0003059,1.62e-12,71;UBERON:0007282,1.62e-12,71;UBERON:0004290,1.62e-12,71;UBERON:0009618,1.62e-12,71;UBERON:0007524,1.67e-12,73;UBERON:0007503,4.44e-12,78;UBERON:0002100,4.90e-12,199;UBERON:0003077,5.32e-12,72;UBERON:0007285,5.32e-12,72;UBERON:0001134,6.70e-12,62;UBERON:0002036,6.70e-12,62;UBERON:0003082,6.70e-12,62;UBERON:0000490,1.66e-11,148;UBERON:0000486,2.05e-11,83;UBERON:0002385,3.00e-11,64;UBERON:0001015,3.00e-11,64;UBERON:0000383,3.00e-11,64;UBERON:0003914,5.02e-09,117;UBERON:0002049,1.53e-08,78;UBERON:0007798,1.53e-08,78;UBERON:0004872,1.78e-08,83;UBERON:0000119,8.91e-08,309;UBERON:0000483,1.71e-07,306;UBERON:0001637,9.39e-07,42;UBERON:0003509,9.39e-07,42;UBERON:0004572,9.39e-07,42 | |||
|phase1_expression=3.27021082687002,2.14100523890983,2.96004248601539,2.00146596706261,2.68176656656373,0,0,2.52687949370732,1.56711376919903,2.21160542851358,0.697801167972428,0,0.263766978228454,8.41611200128317,3.64537113300707,11.4295274896802,9.04041792035965,8.03341099426111,5.36726078669558,1.47745269692145,1.83600622119828,1.88072832886853,1.43117993565528,0.958120975510189,0.376627918784408,0.458480434487708,0.821005894499457,0.550975469195755,0,0,0.154816123316076,0,0.30120591877825,1.84877005083394,0,0,0.293600439334847,0,1.20326668482085,0.434021741431704,2.46307021663917,0.971680998056939,3.8636335145128,0.872389432677388,1.88937971844405,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,1.1507695692886,0.768482119587302,0.236482229888585,2.75796544589295,1.93645405075148,1.35426486594342,0.941211697713023,1.36453075028923,0,0.306083892370903,3.20929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.870627715885752,1.13477044938228,0,0.251248665256743,0,0.217188844705117,1.81619850790011,1.47311054395026,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,2.01210257911091,2.30152611318355,2.1686349143074,1.50401373190767,1.30361867064741,0.795285947051099,0.486634870302636,5.0103453096956,2.66075276955077,2.98638271356629,3.01251873644739,1.45718115317017,0,0.649094787309367,1.0447784237956,0.531831842075461,12.1630218395724,2.85997455390064,2.97166001063652,2.18638648103376,0,4.51282652089873,3.95715559346807,2.51699661725944,3.02629846134074,2.29894463190492,4.65150166504792,6.75955899104749,3.01248551488203,0.402829317109147,0,0.732186172644509,2.20597848207521,2.43042584364528,4.55428614248807,8.30758678716828,7.20713475093262,0,0.949265659568129,4.39684185432977,0,0,0.436094052142534,2.48485975847659,5.44511200157693,8.60659675285922,7.45775213946916,8.15737279056221,1.68203280042692,2.1349799145941,2.22000793575444,4.97937656639626,4.04132016209064,2.28846664358842,1.81628913173918,2.30470369792,6.09235722767871,5.61888138294577,0.570471821544449,5.23070381931304,5.40198693761318,3.72307772046703,4.49442581447195,8.16616685019573,3.4393608847295,6.92282733877629,4.75201142912821,6.92347401979959,0.910161361938026,5.74894513452991,3.70339450698946,7.00663711282999,4.15596173226274,6.14568669233173,2.45190236639216,7.96261712204963,2.7223723958405,3.40840307808838,6.19316427573846,8.47727604638247,3.60109315301283,3.81294358182224,3.34932702059318,4.09457083929498,13.5021065793013,2.43592512902997,2.52433774244115,10.1254888506529,3.07127507955743,5.32514388774922,2.51880245569101,4.0694542154517,1.35282597214308,1.09098448236334,1.43402297694502,0.853815942907168,0.132529768321485,0.348581828608555,0.518305275076852,0.252320850875628,0,3.12899064659632,2.57296375277154,0,1.85747171212792,5.77503585335668,0.118306800039844,0.505754070234305,0,0.220587945464788,0,0.474541238222193,0.404493924480493,0.588664395376038,0.38474715694639,0,1.40241773803446,0.4115740113314,0,1.26755034821831,4.91413608338813,2.36315962672562,0,0.737930631258681,3.60292401626904,1.31700342490351,1.1240175325762,0.703702806881416,0.555530670951178,3.58389135841357,2.07986957055916,4.3299402607582,1.73895607462615,2.46558257895225,1.15493158208859,2.77791307545966,3.23432058798817,1.58040879591855,0.858486162094873,3.93947209739836,3.04205544681009,4.01304138179566,0,1.17587489739202,0.425325291727159,5.55262840757659,5.52204483176528,0.766765358330422,3.4486426652716,5.81119664487292,0.414656231081544,0.720599767084807,0.50496973370552,0.126995788584338,0,0,0,0.308482478109971,0,0,2.35475277125258,3.05172048183296,3.6669142910475,4.91232519879556,3.57656445851882,7.607724773004,6.11657668145202,1.04007436911366,6.17297698229141,4.25547396069835,6.39413229638638,1.85871391755592,5.42621605391443,4.93944202068461,4.88604276440603,1.77695974371273,2.37585561880029,3.61727252471503,0.871533458600294,0.399891964728228,0,2.00902836572851,0,1.19812427745791,2.29723871668228,29.9537500585509,4.34343920002738,3.6985738059069,6.44619467663624,0,0.197030760201927,0,0.256686072559497,1.27047312111232,1.30139853857622,4.63973287666617,3.51784157202132,12.7587750330633,0,0,0,8.83378740377807,14.004774589671,5.15403545029498,16.4296980609338,15.5233220253531,11.8276811275451,13.2369798941766,1.50473049863859,2.27407504055985,4.1389228517002,5.97803038681893,1.29058417979192,4.34418072340414,1.95801157462741,1.37257369524342,0.413536052245775,0,0.106727557803444,0,0,0,3.2254015016441,4.75732117192994,2.24528075546459,3.97231362692673,3.58195074346692,2.0911009748669,0,4.62629081407967,4.26148140751505,5.99528238900807,12.4621063004069,4.29978400301849,1.0877350463246,0.601519410909855,3.86740153530765,3.67406234126742,3.82391452814106,1.83574180943194,1.80479845162965,3.08061348417659,3.13739907670742,0,2.95544560900052,0,1.19065593693561,4.31831832204279,3.084545053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| |||
|short_description=p6@NRP1 | |||
}} |
Revision as of 13:15, 10 September 2013
Short description: | p6@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NRP1_5end |
Coexpression cluster: | C2059_Myoblast_prostate_tridermal_mucinous_myxofibrosarcoma_mesenchymal_osteosarcoma |
Association with transcript: | 0bp_to_uc001iwv.3, uc001iww.3, uc001ixb.1, uc009xlz.2_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | Q5T7F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.04e-12 | 76 |
muscle precursor cell | 1.43e-11 | 58 |
myoblast | 1.43e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-11 | 58 |
muscle cell | 1.04e-10 | 55 |
electrically responsive cell | 4.28e-10 | 61 |
electrically active cell | 4.28e-10 | 61 |
mesodermal cell | 1.69e-09 | 121 |
smooth muscle cell | 2.72e-07 | 43 |
smooth muscle myoblast | 2.72e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.78e-15 | 160 |
entire embryonic mesenchyme | 5.78e-15 | 160 |
trunk mesenchyme | 7.71e-13 | 122 |
somite | 1.62e-12 | 71 |
presomitic mesoderm | 1.62e-12 | 71 |
presumptive segmental plate | 1.62e-12 | 71 |
dermomyotome | 1.62e-12 | 71 |
trunk paraxial mesoderm | 1.62e-12 | 71 |
dense mesenchyme tissue | 1.67e-12 | 73 |
epithelial vesicle | 4.44e-12 | 78 |
trunk | 4.90e-12 | 199 |
paraxial mesoderm | 5.32e-12 | 72 |
presumptive paraxial mesoderm | 5.32e-12 | 72 |
skeletal muscle tissue | 6.70e-12 | 62 |
striated muscle tissue | 6.70e-12 | 62 |
myotome | 6.70e-12 | 62 |
unilaminar epithelium | 1.66e-11 | 148 |
multilaminar epithelium | 2.05e-11 | 83 |
muscle tissue | 3.00e-11 | 64 |
musculature | 3.00e-11 | 64 |
musculature of body | 3.00e-11 | 64 |
epithelial tube | 5.02e-09 | 117 |
vasculature | 1.53e-08 | 78 |
vascular system | 1.53e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.78e-08 | 83 |
cell layer | 8.91e-08 | 309 |
epithelium | 1.71e-07 | 306 |
artery | 9.39e-07 | 42 |
arterial blood vessel | 9.39e-07 | 42 |
arterial system | 9.39e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.