FFCP PHASE1:Hg19::chr10:36812448..36812461,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C107|description=CAGE_peak_at_chr10:36812448..36812461,+|id=chr10:36812448..36812461,+|ontology_enrichment_celltype=CL:0000860!7.51e-18!45;CL:0002057!2.72e-17!42;CL:0002009!8.90e-14!65;CL:0002194!6.69e-13!63;CL:0000576!6.69e-13!63;CL:0000040!6.69e-13!63;CL:0000559!6.69e-13!63;CL:0000766!3.68e-12!76;CL:0000557!1.67e-11!71;CL:0000839!9.22e-11!70;CL:0002087!5.00e-08!119;CL:0000763!8.12e-08!112;CL:0000049!8.12e-08!112;CL:0000738!1.86e-07!140;CL:0002031!4.05e-07!124|ontology_enrichment_celltype_v019=CL:0000860;1.43e-46;33!CL:0002057;1.43e-46;33!CL:0000473;9.58e-37;39!CL:0000234;9.58e-37;39!CL:0000576;1.89e-23;48!CL:0000766;8.54e-19;69!CL:0000775;7.75e-09;3!CL:0000763;1.96e-08;100!CL:0002087;1.46e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-45,42;CL:0002057,4.17e-45,42;CL:0000473,5.22e-44,48;CL:0000234,5.22e-44,48;CL:0002009,5.32e-34,61;CL:0000766,6.15e-34,72;CL:0002194,3.26e-33,59;CL:0000576,3.26e-33,59;CL:0000040,3.26e-33,59;CL:0000559,3.26e-33,59;CL:0000557,4.14e-30,67;CL:0000839,1.02e-28,66;CL:0000763,1.74e-20,108;CL:0000049,1.74e-20,108;CL:0000738,1.50e-19,136;CL:0002087,3.54e-18,115;CL:0002031,4.75e-17,120;CL:0002032,7.15e-14,161;CL:0000837,7.15e-14,161;CL:0000037,1.14e-13,168;CL:0000988,3.18e-13,177;CL:0000775,7.85e-09,3|ontology_enrichment_development_v019=CL:0002057;4.68e-34;42!CL:0000049;3.16e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.30e-12!112;UBERON:0002390!2.50e-12!102;UBERON:0003061!2.50e-12!102;UBERON:0002405!4.05e-10!115;UBERON:0002371!1.64e-09!80;UBERON:0001474!5.31e-08!86;UBERON:0004765!9.37e-08!101;UBERON:0001434!9.37e-08!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-08;15!UBERON:0000179;1.78e-08;15!UBERON:0000463;1.78e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.87e-33,98;UBERON:0003061,3.87e-33,98;UBERON:0002193,3.82e-32,108;UBERON:0002371,3.10e-27,76;UBERON:0002405,6.60e-25,93;UBERON:0001474,1.56e-24,82;UBERON:0004765,1.70e-21,90;UBERON:0001434,2.16e-18,100;UBERON:0003081,5.56e-13,203;UBERON:0002204,5.95e-11,167;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0.893922188854576,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,1.06978768047132,0.410502947249729,0.550975469195755,0,0,0.77408061658038,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,1.60435557976113,1.95309783644267,0.223915474239924,0,0.257575567634187,4.21654892460738,2.26725566213286,0.242584061187816,5.57829688573643,1.23350366406548,5.26500830521676,10.3569261235974,5.12321413058201,0.47296445977717,13.1003358679915,1.93645405075148,4.06279459783025,7.34145124216158,3.0019676506363,1.12361742222542,15.3041946185451,1.28371610830437,6.39337125799041,4.28806690242731,4.9865914405408,3.83602275479425,14.2202526928006,1.70215567407342,4.35975574296902,10.80369260604,6.25779502104242,3.47502151528187,12.1079900526674,2.57794345191295,3.79754864929061,0,0.637812899895131,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.512365278902701,0.910415432919148,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.383587685530591,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.675668882899933,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.67355336034844,0.163461903113459,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.161872944368132,0,0.61246251376468,0.245668634623536,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0.55146986366197,0.435758888184812,0,0.404493924480493,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0.1174086942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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_at_chr10:36812448..36812461,+ | |||
|id=chr10:36812448..36812461,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.51e-18!45;CL:0002057!2.72e-17!42;CL:0002009!8.90e-14!65;CL:0002194!6.69e-13!63;CL:0000576!6.69e-13!63;CL:0000040!6.69e-13!63;CL:0000559!6.69e-13!63;CL:0000766!3.68e-12!76;CL:0000557!1.67e-11!71;CL:0000839!9.22e-11!70;CL:0002087!5.00e-08!119;CL:0000763!8.12e-08!112;CL:0000049!8.12e-08!112;CL:0000738!1.86e-07!140;CL:0002031!4.05e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-46;33!CL:0002057;1.43e-46;33!CL:0000473;9.58e-37;39!CL:0000234;9.58e-37;39!CL:0000576;1.89e-23;48!CL:0000766;8.54e-19;69!CL:0000775;7.75e-09;3!CL:0000763;1.96e-08;100!CL:0002087;1.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-45,42;CL:0002057,4.17e-45,42;CL:0000473,5.22e-44,48;CL:0000234,5.22e-44,48;CL:0002009,5.32e-34,61;CL:0000766,6.15e-34,72;CL:0002194,3.26e-33,59;CL:0000576,3.26e-33,59;CL:0000040,3.26e-33,59;CL:0000559,3.26e-33,59;CL:0000557,4.14e-30,67;CL:0000839,1.02e-28,66;CL:0000763,1.74e-20,108;CL:0000049,1.74e-20,108;CL:0000738,1.50e-19,136;CL:0002087,3.54e-18,115;CL:0002031,4.75e-17,120;CL:0002032,7.15e-14,161;CL:0000837,7.15e-14,161;CL:0000037,1.14e-13,168;CL:0000988,3.18e-13,177;CL:0000775,7.85e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.68e-34;42!CL:0000049;3.16e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.30e-12!112;UBERON:0002390!2.50e-12!102;UBERON:0003061!2.50e-12!102;UBERON:0002405!4.05e-10!115;UBERON:0002371!1.64e-09!80;UBERON:0001474!5.31e-08!86;UBERON:0004765!9.37e-08!101;UBERON:0001434!9.37e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-08;15!UBERON:0000179;1.78e-08;15!UBERON:0000463;1.78e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.87e-33,98;UBERON:0003061,3.87e-33,98;UBERON:0002193,3.82e-32,108;UBERON:0002371,3.10e-27,76;UBERON:0002405,6.60e-25,93;UBERON:0001474,1.56e-24,82;UBERON:0004765,1.70e-21,90;UBERON:0001434,2.16e-18,100;UBERON:0003081,5.56e-13,203;UBERON:0002204,5.95e-11,167;UBERON:0000178,2.41e-08,15;UBERON:0000179,2.41e-08,15;UBERON:0000463,2.41e-08,15 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0.893922188854576,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,1.06978768047132,0.410502947249729,0.550975469195755,0,0,0.77408061658038,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,1.60435557976113,1.95309783644267,0.223915474239924,0,0.257575567634187,4.21654892460738,2.26725566213286,0.242584061187816,5.57829688573643,1.23350366406548,5.26500830521676,10.3569261235974,5.12321413058201,0.47296445977717,13.1003358679915,1.93645405075148,4.06279459783025,7.34145124216158,3.0019676506363,1.12361742222542,15.3041946185451,1.28371610830437,6.39337125799041,4.28806690242731,4.9865914405408,3.83602275479425,14.2202526928006,1.70215567407342,4.35975574296902,10.80369260604,6.25779502104242,3.47502151528187,12.1079900526674,2.57794345191295,3.79754864929061,0,0.637812899895131,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0.512365278902701,0.910415432919148,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.383587685530591,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.675668882899933,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.67355336034844,0.163461903113459,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.161872944368132,0,0.61246251376468,0.245668634623536,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.276149695926898,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0.55146986366197,0.435758888184812,0,0.404493924480493,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0.117408694235822,0.577465791044295,1.38895653772983,1.14152491340759,0,0,0,0,0.445893486866185,0,0.335964256397719,0.567100388969546,1.07470227243418,0,0,0,0,0,0.576479813667846,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0.714889968290738,0,0.823240336780769,0,0,0,1.20575750823834,0.871533458600294,1.89948683245908,0,1.50677127429638,2.10833939483032,0,1.14861935834114,0,0,0.410952645100767,0.537182889719687,1.45710687191585,0.394061520403854,0,0,0.508189248444927,0,0,0.335032530668698,1.91381625495949,14.2311334549965,26.9245313283622,8.28831026872071,0.49076596687656,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0,0,1.07857100409308,0.533637789017222,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0.802025881213139,0.920809889358963,0.459257792658427,0.364182336013434,0.524497659837696,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0.193341436584244,0.924291702687866,0.307007349452259,0,0.322260734604821,1.0151168573996,0.255679882248303,0,0.826424576804891,1.34533047155574,0.127612712494584,1.4162089319777,0,0,0,0.308033580176089,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0,1.46228093778771,0,0.272999822815972,0.565621727814851,0,0,1.32687795048244,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.987884678879706,0,0,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0,0,2.53723804616085,1.52927441428475,7.97506062043828,1.19115887728894,1.23408681925858,0,1.08006287447623,7.13812658664843,0.213648142254946,0,0.490080431962063,0.743212700502875,0.28853842595289,0,0.318852545457645,0.199579371432817,0,0.423347165447766,0.649243880549111,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0.37428108081644,0.586032717087576,0,0,1.98895302764489,0.23874448473769,0.593929361665277,0.307160702099232,0,0,1.00177834520615,3.79048910721547,0,0.796991953004279,0,0.503865495708552,0.306806047506464,0.738508832766417,0,0.0898683511473268,2.32727527078292,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599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| |||
|short_description=p@chr10:36812448..36812461,+ | |||
}} |
Revision as of 13:17, 10 September 2013
Short description: | p@chr10:36812448..36812461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:36812448..36812461, + |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.17e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.17e-45 | 42 |
defensive cell | 5.22e-44 | 48 |
phagocyte | 5.22e-44 | 48 |
macrophage dendritic cell progenitor | 5.32e-34 | 61 |
myeloid leukocyte | 6.15e-34 | 72 |
monopoietic cell | 3.26e-33 | 59 |
monocyte | 3.26e-33 | 59 |
monoblast | 3.26e-33 | 59 |
promonocyte | 3.26e-33 | 59 |
granulocyte monocyte progenitor cell | 4.14e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.02e-28 | 66 |
myeloid cell | 1.74e-20 | 108 |
common myeloid progenitor | 1.74e-20 | 108 |
leukocyte | 1.50e-19 | 136 |
nongranular leukocyte | 3.54e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.75e-17 | 120 |
hematopoietic oligopotent progenitor cell | 7.15e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.15e-14 | 161 |
hematopoietic stem cell | 1.14e-13 | 168 |
hematopoietic cell | 3.18e-13 | 177 |
neutrophil | 7.85e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.87e-33 | 98 |
blood island | 3.87e-33 | 98 |
hemolymphoid system | 3.82e-32 | 108 |
bone marrow | 3.10e-27 | 76 |
immune system | 6.60e-25 | 93 |
bone element | 1.56e-24 | 82 |
skeletal element | 1.70e-21 | 90 |
skeletal system | 2.16e-18 | 100 |
lateral plate mesoderm | 5.56e-13 | 203 |
musculoskeletal system | 5.95e-11 | 167 |
blood | 2.41e-08 | 15 |
haemolymphatic fluid | 2.41e-08 | 15 |
organism substance | 2.41e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.