FFCP PHASE1:Hg19::chr11:10476755..10476782,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=272|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=470|TSSclassifier=S|UniProt=Q01432|association_with_transcript=-84bp_to_ENST00000396553_5end|description=CAGE_peak_13_at_AMPD3_5end|id=chr11:10476755..10476782,+|ontology_enrichment_celltype=CL:0002057!1.18e-23!42;CL:0000860!4.62e-21!45;CL:0002194!2.04e-17!63;CL:0000576!2.04e-17!63;CL:0000040!2.04e-17!63;CL:0000559!2.04e-17!63;CL:0002009!2.15e-16!65;CL:0000766!2.68e-16!76;CL:0000839!6.84e-15!70;CL:0000557!1.83e-14!71;CL:0000359!1.64e-09!32;CL:0000680!1.57e-08!57;CL:0000056!1.57e-08!57;CL:0000355!1.57e-08!57;CL:0002371!1.28e-07!591;CL:0000192!2.21e-07!42;CL:0000514!2.21e-07!42;CL:0000144!3.31e-07!625;CL:0000187!3.80e-07!54;CL:0000723!4.86e-07!436;CL:0000763!4.92e-07!112;CL:0000049!4.92e-07!112;CL:0000183!6.45e-07!59;CL:0002087!6.69e-07!119|ontology_enrichment_celltype_v019=CL:0000860;9.89e-62;33!CL:0002057;9.89e-62;33!CL:0000473;2.98e-48;39!CL:0000234;2.98e-48;39!CL:0000576;1.30e-28;48!CL:0000766;6.56e-20;69!CL:0000763;5.89e-09;100!CL:0002087;1.29e-07;104!CL:0000359;3.95e-07;32!CL:0002596;7.75e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,4.31e-55,42;CL:0002057,4.31e-55,42;CL:0000473,9.18e-55,48;CL:0000234,9.18e-55,48;CL:0002194,3.94e-42,59;CL:0000576,3.94e-42,59;CL:0000040,3.94e-42,59;CL:0000559,3.94e-42,59;CL:0000766,8.20e-41,72;CL:0002009,1.67e-40,61;CL:0000839,7.38e-37,66;CL:0000557,3.41e-36,67;CL:0000763,2.21e-24,108;CL:0000049,2.21e-24,108;CL:0002087,7.41e-18,115;CL:0000738,1.27e-17,136;CL:0002031,8.57e-17,120;CL:0002032,1.35e-13,161;CL:0000837,1.35e-13,161;CL:0000037,1.09e-12,168;CL:0000988,1.24e-11,177;CL:0000048,2.17e-09,427;CL:0000723,4.33e-09,433;CL:0000034,1.05e-08,441;CL:0000359,2.14e-07,32;CL:0002596,5.21e-07,2;CL:0000134,6.08e-07,354|ontology_enrichment_development_v019=CL:0002057;1.98e-41;42!CL:0000049;6.29e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.02e-17!167;UBERON:0000486!1.27e-12!82;UBERON:0002371!7.91e-12!80;UBERON:0001474!7.88e-11!86;UBERON:0004290!9.84e-11!70;UBERON:0002390!1.07e-10!102;UBERON:0003061!1.07e-10!102;UBERON:0004765!2.92e-10!101;UBERON:0001434!2.92e-10!101;UBERON:0002193!1.97e-09!112;UBERON:0001134!4.17e-09!61;UBERON:0002036!4.17e-09!61;UBERON:0003082!4.17e-09!61;UBERON:0000914!6.06e-09!83;UBERON:0002329!6.06e-09!83;UBERON:0003077!6.06e-09!83;UBERON:0003059!6.06e-09!83;UBERON:0007282!6.06e-09!83;UBERON:0009618!6.06e-09!83;UBERON:0007285!6.06e-09!83;UBERON:0002385!1.79e-08!63;UBERON:0001015!1.79e-08!63;UBERON:0000383!1.79e-08!63;UBERON:0000926!5.18e-07!448;UBERON:0004120!5.18e-07!448;UBERON:0006603!5.18e-07!448;UBERON:0002405!6.67e-07!115|ontology_enrichment_uberon_v019=UBERON:0004573;5.27e-08;33!UBERON:0004571;5.27e-08;33!UBERON:0005396;7.75e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-31,76;UBERON:0001474,2.35e-30,82;UBERON:0002204,3.69e-28,167;UBERON:0001434,5.21e-27,100;UBERON:0004765,6.06e-27,90;UBERON:0002405,6.54e-24,93;UBERON:0002390,2.70e-22,98;UBERON:0003061,2.70e-22,98;UBERON:0002193,1.63e-19,108;UBERON:0003081,1.33e-17,203;UBERON:0000926,1.17e-13,315;UBERON:0004120,1.17e-13,315;UBERON:0006603,1.17e-13,315;UBERON:0004573,9.04e-09,33;UBERON:0004571,9.04e-09,33;UBERON:0000486,1.74e-07,83;UBERON:0005396,5.21e-07,2|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,2.01697543935533,1.80808358407193,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,1.15148819429164,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,1.74477886535478,4.53451132426571,0.727752183563449,4.18372266430232,11.5127008646111,5.57471467611186,1.43846196161075,3.84241059793651,2.12834006899727,2.06847408441971,8.39130088658974,8.12558919566051,2.82363509313907,7.36846605156184,3.82029923556644,5.20342617030534,10.269728866435,7.03270838378945,0.329851300186716,1.79517291859469,0.426224750532694,5.5139755339431,15.3194010666608,8.71951148593805,1.25624332628372,5.73631210262222,2.82345498116652,3.63239701580021,14.7311054395026,6.96217252369946,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,2.91300197789081,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0.280901613404497,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0.966304265816484,1.09098448236334,1.14721838155602,0,0,0,0.10366105501537,0,0,1.56449532329816,0,1.38134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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=272 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |||
|TSSclassifier=S | |||
|UniProt=Q01432 | |||
|association_with_transcript=-84bp_to_ENST00000396553_5end | |||
|description=CAGE_peak_13_at_AMPD3_5end | |||
|id=chr11:10476755..10476782,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.18e-23!42;CL:0000860!4.62e-21!45;CL:0002194!2.04e-17!63;CL:0000576!2.04e-17!63;CL:0000040!2.04e-17!63;CL:0000559!2.04e-17!63;CL:0002009!2.15e-16!65;CL:0000766!2.68e-16!76;CL:0000839!6.84e-15!70;CL:0000557!1.83e-14!71;CL:0000359!1.64e-09!32;CL:0000680!1.57e-08!57;CL:0000056!1.57e-08!57;CL:0000355!1.57e-08!57;CL:0002371!1.28e-07!591;CL:0000192!2.21e-07!42;CL:0000514!2.21e-07!42;CL:0000144!3.31e-07!625;CL:0000187!3.80e-07!54;CL:0000723!4.86e-07!436;CL:0000763!4.92e-07!112;CL:0000049!4.92e-07!112;CL:0000183!6.45e-07!59;CL:0002087!6.69e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.89e-62;33!CL:0002057;9.89e-62;33!CL:0000473;2.98e-48;39!CL:0000234;2.98e-48;39!CL:0000576;1.30e-28;48!CL:0000766;6.56e-20;69!CL:0000763;5.89e-09;100!CL:0002087;1.29e-07;104!CL:0000359;3.95e-07;32!CL:0002596;7.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.31e-55,42;CL:0002057,4.31e-55,42;CL:0000473,9.18e-55,48;CL:0000234,9.18e-55,48;CL:0002194,3.94e-42,59;CL:0000576,3.94e-42,59;CL:0000040,3.94e-42,59;CL:0000559,3.94e-42,59;CL:0000766,8.20e-41,72;CL:0002009,1.67e-40,61;CL:0000839,7.38e-37,66;CL:0000557,3.41e-36,67;CL:0000763,2.21e-24,108;CL:0000049,2.21e-24,108;CL:0002087,7.41e-18,115;CL:0000738,1.27e-17,136;CL:0002031,8.57e-17,120;CL:0002032,1.35e-13,161;CL:0000837,1.35e-13,161;CL:0000037,1.09e-12,168;CL:0000988,1.24e-11,177;CL:0000048,2.17e-09,427;CL:0000723,4.33e-09,433;CL:0000034,1.05e-08,441;CL:0000359,2.14e-07,32;CL:0002596,5.21e-07,2;CL:0000134,6.08e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-41;42!CL:0000049;6.29e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.02e-17!167;UBERON:0000486!1.27e-12!82;UBERON:0002371!7.91e-12!80;UBERON:0001474!7.88e-11!86;UBERON:0004290!9.84e-11!70;UBERON:0002390!1.07e-10!102;UBERON:0003061!1.07e-10!102;UBERON:0004765!2.92e-10!101;UBERON:0001434!2.92e-10!101;UBERON:0002193!1.97e-09!112;UBERON:0001134!4.17e-09!61;UBERON:0002036!4.17e-09!61;UBERON:0003082!4.17e-09!61;UBERON:0000914!6.06e-09!83;UBERON:0002329!6.06e-09!83;UBERON:0003077!6.06e-09!83;UBERON:0003059!6.06e-09!83;UBERON:0007282!6.06e-09!83;UBERON:0009618!6.06e-09!83;UBERON:0007285!6.06e-09!83;UBERON:0002385!1.79e-08!63;UBERON:0001015!1.79e-08!63;UBERON:0000383!1.79e-08!63;UBERON:0000926!5.18e-07!448;UBERON:0004120!5.18e-07!448;UBERON:0006603!5.18e-07!448;UBERON:0002405!6.67e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.27e-08;33!UBERON:0004571;5.27e-08;33!UBERON:0005396;7.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-31,76;UBERON:0001474,2.35e-30,82;UBERON:0002204,3.69e-28,167;UBERON:0001434,5.21e-27,100;UBERON:0004765,6.06e-27,90;UBERON:0002405,6.54e-24,93;UBERON:0002390,2.70e-22,98;UBERON:0003061,2.70e-22,98;UBERON:0002193,1.63e-19,108;UBERON:0003081,1.33e-17,203;UBERON:0000926,1.17e-13,315;UBERON:0004120,1.17e-13,315;UBERON:0006603,1.17e-13,315;UBERON:0004573,9.04e-09,33;UBERON:0004571,9.04e-09,33;UBERON:0000486,1.74e-07,83;UBERON:0005396,5.21e-07,2 | |||
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| |||
|short_description=p13@AMPD3 | |||
}} |
Revision as of 15:27, 10 September 2013
Short description: | p13@AMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_AMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -84bp_to_ENST00000396553_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | Q01432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.31e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.31e-55 | 42 |
defensive cell | 9.18e-55 | 48 |
phagocyte | 9.18e-55 | 48 |
monopoietic cell | 3.94e-42 | 59 |
monocyte | 3.94e-42 | 59 |
monoblast | 3.94e-42 | 59 |
promonocyte | 3.94e-42 | 59 |
myeloid leukocyte | 8.20e-41 | 72 |
macrophage dendritic cell progenitor | 1.67e-40 | 61 |
myeloid lineage restricted progenitor cell | 7.38e-37 | 66 |
granulocyte monocyte progenitor cell | 3.41e-36 | 67 |
myeloid cell | 2.21e-24 | 108 |
common myeloid progenitor | 2.21e-24 | 108 |
nongranular leukocyte | 7.41e-18 | 115 |
leukocyte | 1.27e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 8.57e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.35e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-13 | 161 |
hematopoietic stem cell | 1.09e-12 | 168 |
hematopoietic cell | 1.24e-11 | 177 |
multi fate stem cell | 2.17e-09 | 427 |
somatic stem cell | 4.33e-09 | 433 |
stem cell | 1.05e-08 | 441 |
vascular associated smooth muscle cell | 2.14e-07 | 32 |
smooth muscle cell of the carotid artery | 5.21e-07 | 2 |
mesenchymal cell | 6.08e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.38e-31 | 76 |
bone element | 2.35e-30 | 82 |
musculoskeletal system | 3.69e-28 | 167 |
skeletal system | 5.21e-27 | 100 |
skeletal element | 6.06e-27 | 90 |
immune system | 6.54e-24 | 93 |
hematopoietic system | 2.70e-22 | 98 |
blood island | 2.70e-22 | 98 |
hemolymphoid system | 1.63e-19 | 108 |
lateral plate mesoderm | 1.33e-17 | 203 |
mesoderm | 1.17e-13 | 315 |
mesoderm-derived structure | 1.17e-13 | 315 |
presumptive mesoderm | 1.17e-13 | 315 |
systemic artery | 9.04e-09 | 33 |
systemic arterial system | 9.04e-09 | 33 |
multilaminar epithelium | 1.74e-07 | 83 |
carotid artery segment | 5.21e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.