FFCP PHASE1:Hg19::chr11:129062186..129062232,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9743|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17399|TSSclassifier=S|UniProt=A7KAX9,C9JQQ7,Q86T64|association_with_transcript=-93bp_to_ENST00000310343,ENST00000356092,NM_001142685,uc009zcp.2_5end|description=CAGE_peak_5_at_ARHGAP32_5end|id=chr11:129062186..129062232,-|ontology_enrichment_celltype=CL:0002076!3.92e-22!43;CL:0000066!8.35e-18!254;CL:0000223!2.72e-16!59;CL:0002368!6.32e-13!13;CL:0002251!1.83e-10!21;CL:0002159!7.20e-09!13;CL:0002202!2.29e-08!9;CL:0002632!2.29e-08!9;CL:0000622!4.89e-07!5|ontology_enrichment_celltype_v019=CL:0002076;1.42e-21;42!CL:0002368;7.06e-18;13!CL:0002251;7.29e-15;20!CL:0002159;1.98e-13;14!CL:0000622;1.21e-10;5!CL:0002202;1.64e-10;9!CL:0002632;1.64e-10;9!CL:0000244;3.57e-09;4!CL:0000731;3.57e-09;4!CL:0000154;8.70e-09;6!CL:0002621;1.09e-07;3!CL:0002328;4.54e-07;3!CL:0000307;6.12e-07;3!CL:0002166;8.57e-07;3|ontology_enrichment_celltype_v019_2=CL:0002076,3.12e-27,42;CL:0000066,9.56e-22,253;CL:0000223,3.18e-19,58;CL:0002368,7.39e-18,13;CL:0002251,7.08e-15,20;CL:0002159,2.35e-13,14;CL:0000622,1.13e-10,5;CL:0002202,1.67e-10,9;CL:0002632,1.67e-10,9;CL:0000244,3.85e-09,4;CL:0000731,3.85e-09,4;CL:0000154,8.21e-09,6;CL:0002621,9.99e-08,3;CL:0002328,5.14e-07,3;CL:0000068,6.06e-07,3;CL:0000069,6.06e-07,3;CL:0000307,6.06e-07,3;CL:0000377,6.06e-07,3|ontology_enrichment_development_v019=CL:0000223;9.42e-10;58!CL:0000377;6.12e-07;3|ontology_enrichment_disease=DOID:1749!6.03e-08!14|ontology_enrichment_disease_v019=DOID:1749;3.12e-13;14|ontology_enrichment_disease_v019_2=DOID:1749,3.24e-13,14|ontology_enrichment_uberon=UBERON:0004119!5.19e-16!169;UBERON:0000925!5.19e-16!169;UBERON:0006595!5.19e-16!169;UBERON:0001004!6.17e-13!72;UBERON:0001007!1.00e-10!155;UBERON:0001555!1.00e-10!155;UBERON:0007026!1.00e-10!155;UBERON:0000077!1.54e-09!130;UBERON:0000161!4.63e-09!35;UBERON:0001008!1.91e-08!45;UBERON:0005631!1.96e-08!14;UBERON:0000158!1.96e-08!14;UBERON:0000065!2.04e-08!53;UBERON:0004921!3.05e-08!129;UBERON:0004185!3.05e-08!129;UBERON:0006554!6.37e-08!44;UBERON:0000166!9.51e-08!21;UBERON:0000464!1.02e-07!104;UBERON:0005911!1.57e-07!82;UBERON:0005178!1.91e-07!34;UBERON:0002224!1.91e-07!34;UBERON:0007196!2.15e-07!14;UBERON:0001558!2.15e-07!14;UBERON:0000365!2.72e-07!5;UBERON:0005181!4.37e-07!35;UBERON:0005153!8.61e-07!37;UBERON:0000344!9.54e-07!12|ontology_enrichment_uberon_v019=UBERON:0000365;4.09e-11;5!UBERON:0000165;7.18e-11;28!UBERON:0000161;7.38e-11;19!UBERON:0000166;7.38e-11;19!UBERON:0000486;7.80e-11;12!UBERON:0007196;2.33e-09;15!UBERON:0001558;2.33e-09;15!UBERON:0005910;3.57e-09;6!UBERON:0000344;1.51e-08;20!UBERON:0005911;1.73e-08;36!UBERON:0005178;3.65e-08;34!UBERON:0002224;3.65e-08;34!UBERON:0004807;5.36e-08;22!UBERON:0002294;7.87e-08;7!UBERON:0001173;7.87e-08;7!UBERON:0001949;1.09e-07;3!UBERON:0005181;2.71e-07;35!UBERON:0005631;4.22e-07;10!UBERON:0000158;4.22e-07;10!UBERON:0003729;4.29e-07;13!UBERON:0004815;4.54e-07;3!UBERON:0002031;4.54e-07;3!UBERON:0003126;5.44e-07;7!UBERON:0001005;5.44e-07;7!UBERON:0001004;9.59e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.38e-18,160;UBERON:0000925,8.38e-18,160;UBERON:0006595,8.38e-18,160;UBERON:0001004,1.45e-15,74;UBERON:0000166,8.72e-13,22;UBERON:0000365,4.27e-11,5;UBERON:0001007,5.61e-11,145;UBERON:0001555,5.61e-11,145;UBERON:0007026,5.61e-11,145;UBERON:0000161,7.85e-11,36;UBERON:0000165,2.11e-10,29;UBERON:0000930,2.11e-10,29;UBERON:0003102,1.43e-09,99;UBERON:0007196,2.34e-09,15;UBERON:0001558,2.34e-09,15;UBERON:0005910,3.70e-09,6;UBERON:0000065,4.91e-09,54;UBERON:0000033,5.61e-09,56;UBERON:0005178,1.06e-08,34;UBERON:0002224,1.06e-08,34;UBERON:0000153,1.38e-08,62;UBERON:0007811,1.38e-08,62;UBERON:0000344,1.72e-08,20;UBERON:0005181,2.35e-08,35;UBERON:0001041,3.60e-08,87;UBERON:0005631,5.22e-08,14;UBERON:0000158,5.22e-08,14;UBERON:0001949,9.99e-08,3;UBERON:0004921,1.26e-07,118;UBERON:0001444,1.82e-07,49;UBERON:0003729,4.53e-07,13;UBERON:0005911,4.61e-07,82;UBERON:0004815,5.14e-07,3;UBERON:0002031,5.14e-07,3;UBERON:0003126,5.37e-07,7;UBERON:0001005,5.37e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,3.05817920982241,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,11.0330546937471,3.0120591877825,4.80680213216824,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0,0.511946444617674,0,0,0,2.62088766192152,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,2.91436230634034,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7889120429611,14.4555443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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17399 | |||
|TSSclassifier=S | |||
|UniProt=A7KAX9,C9JQQ7,Q86T64 | |||
|association_with_transcript=-93bp_to_ENST00000310343,ENST00000356092,NM_001142685,uc009zcp.2_5end | |||
|description=CAGE_peak_5_at_ARHGAP32_5end | |||
|id=chr11:129062186..129062232,- | |||
|ontology_enrichment_celltype=CL:0002076!3.92e-22!43;CL:0000066!8.35e-18!254;CL:0000223!2.72e-16!59;CL:0002368!6.32e-13!13;CL:0002251!1.83e-10!21;CL:0002159!7.20e-09!13;CL:0002202!2.29e-08!9;CL:0002632!2.29e-08!9;CL:0000622!4.89e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.42e-21;42!CL:0002368;7.06e-18;13!CL:0002251;7.29e-15;20!CL:0002159;1.98e-13;14!CL:0000622;1.21e-10;5!CL:0002202;1.64e-10;9!CL:0002632;1.64e-10;9!CL:0000244;3.57e-09;4!CL:0000731;3.57e-09;4!CL:0000154;8.70e-09;6!CL:0002621;1.09e-07;3!CL:0002328;4.54e-07;3!CL:0000307;6.12e-07;3!CL:0002166;8.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.12e-27,42;CL:0000066,9.56e-22,253;CL:0000223,3.18e-19,58;CL:0002368,7.39e-18,13;CL:0002251,7.08e-15,20;CL:0002159,2.35e-13,14;CL:0000622,1.13e-10,5;CL:0002202,1.67e-10,9;CL:0002632,1.67e-10,9;CL:0000244,3.85e-09,4;CL:0000731,3.85e-09,4;CL:0000154,8.21e-09,6;CL:0002621,9.99e-08,3;CL:0002328,5.14e-07,3;CL:0000068,6.06e-07,3;CL:0000069,6.06e-07,3;CL:0000307,6.06e-07,3;CL:0000377,6.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;9.42e-10;58!CL:0000377;6.12e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!6.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.12e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.24e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.19e-16!169;UBERON:0000925!5.19e-16!169;UBERON:0006595!5.19e-16!169;UBERON:0001004!6.17e-13!72;UBERON:0001007!1.00e-10!155;UBERON:0001555!1.00e-10!155;UBERON:0007026!1.00e-10!155;UBERON:0000077!1.54e-09!130;UBERON:0000161!4.63e-09!35;UBERON:0001008!1.91e-08!45;UBERON:0005631!1.96e-08!14;UBERON:0000158!1.96e-08!14;UBERON:0000065!2.04e-08!53;UBERON:0004921!3.05e-08!129;UBERON:0004185!3.05e-08!129;UBERON:0006554!6.37e-08!44;UBERON:0000166!9.51e-08!21;UBERON:0000464!1.02e-07!104;UBERON:0005911!1.57e-07!82;UBERON:0005178!1.91e-07!34;UBERON:0002224!1.91e-07!34;UBERON:0007196!2.15e-07!14;UBERON:0001558!2.15e-07!14;UBERON:0000365!2.72e-07!5;UBERON:0005181!4.37e-07!35;UBERON:0005153!8.61e-07!37;UBERON:0000344!9.54e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.09e-11;5!UBERON:0000165;7.18e-11;28!UBERON:0000161;7.38e-11;19!UBERON:0000166;7.38e-11;19!UBERON:0000486;7.80e-11;12!UBERON:0007196;2.33e-09;15!UBERON:0001558;2.33e-09;15!UBERON:0005910;3.57e-09;6!UBERON:0000344;1.51e-08;20!UBERON:0005911;1.73e-08;36!UBERON:0005178;3.65e-08;34!UBERON:0002224;3.65e-08;34!UBERON:0004807;5.36e-08;22!UBERON:0002294;7.87e-08;7!UBERON:0001173;7.87e-08;7!UBERON:0001949;1.09e-07;3!UBERON:0005181;2.71e-07;35!UBERON:0005631;4.22e-07;10!UBERON:0000158;4.22e-07;10!UBERON:0003729;4.29e-07;13!UBERON:0004815;4.54e-07;3!UBERON:0002031;4.54e-07;3!UBERON:0003126;5.44e-07;7!UBERON:0001005;5.44e-07;7!UBERON:0001004;9.59e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.38e-18,160;UBERON:0000925,8.38e-18,160;UBERON:0006595,8.38e-18,160;UBERON:0001004,1.45e-15,74;UBERON:0000166,8.72e-13,22;UBERON:0000365,4.27e-11,5;UBERON:0001007,5.61e-11,145;UBERON:0001555,5.61e-11,145;UBERON:0007026,5.61e-11,145;UBERON:0000161,7.85e-11,36;UBERON:0000165,2.11e-10,29;UBERON:0000930,2.11e-10,29;UBERON:0003102,1.43e-09,99;UBERON:0007196,2.34e-09,15;UBERON:0001558,2.34e-09,15;UBERON:0005910,3.70e-09,6;UBERON:0000065,4.91e-09,54;UBERON:0000033,5.61e-09,56;UBERON:0005178,1.06e-08,34;UBERON:0002224,1.06e-08,34;UBERON:0000153,1.38e-08,62;UBERON:0007811,1.38e-08,62;UBERON:0000344,1.72e-08,20;UBERON:0005181,2.35e-08,35;UBERON:0001041,3.60e-08,87;UBERON:0005631,5.22e-08,14;UBERON:0000158,5.22e-08,14;UBERON:0001949,9.99e-08,3;UBERON:0004921,1.26e-07,118;UBERON:0001444,1.82e-07,49;UBERON:0003729,4.53e-07,13;UBERON:0005911,4.61e-07,82;UBERON:0004815,5.14e-07,3;UBERON:0002031,5.14e-07,3;UBERON:0003126,5.37e-07,7;UBERON:0001005,5.37e-07,7 | |||
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|short_description=p5@ARHGAP32 | |||
}} |
Revision as of 16:37, 10 September 2013
Short description: | p5@ARHGAP32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ARHGAP32_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000310343, ENST00000356092, NM_001142685, uc009zcp.2_5end |
EntrezGene: | ARHGAP32 |
HGNC: | 17399 |
UniProt: | A7KAX9C9JQQ7Q86T64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.12e-27 | 42 |
epithelial cell | 9.56e-22 | 253 |
endodermal cell | 3.18e-19 | 58 |
respiratory epithelial cell | 7.39e-18 | 13 |
epithelial cell of alimentary canal | 7.08e-15 | 20 |
general ecto-epithelial cell | 2.35e-13 | 14 |
acinar cell | 1.13e-10 | 5 |
epithelial cell of tracheobronchial tree | 1.67e-10 | 9 |
epithelial cell of lower respiratory tract | 1.67e-10 | 9 |
transitional epithelial cell | 3.85e-09 | 4 |
urothelial cell | 3.85e-09 | 4 |
protein secreting cell | 8.21e-09 | 6 |
gingival epithelial cell | 9.99e-08 | 3 |
bronchial epithelial cell | 5.14e-07 | 3 |
duct epithelial cell | 6.06e-07 | 3 |
branched duct epithelial cell | 6.06e-07 | 3 |
tracheal epithelial cell | 6.06e-07 | 3 |
tracheoblast | 6.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.38e-18 | 160 |
endoderm | 8.38e-18 | 160 |
presumptive endoderm | 8.38e-18 | 160 |
respiratory system | 1.45e-15 | 74 |
oral opening | 8.72e-13 | 22 |
urothelium | 4.27e-11 | 5 |
digestive system | 5.61e-11 | 145 |
digestive tract | 5.61e-11 | 145 |
primitive gut | 5.61e-11 | 145 |
orifice | 7.85e-11 | 36 |
mouth | 2.11e-10 | 29 |
stomodeum | 2.11e-10 | 29 |
surface structure | 1.43e-09 | 99 |
tracheobronchial tree | 2.34e-09 | 15 |
lower respiratory tract | 2.34e-09 | 15 |
transitional epithelium | 3.70e-09 | 6 |
respiratory tract | 4.91e-09 | 54 |
head | 5.61e-09 | 56 |
thoracic cavity element | 1.06e-08 | 34 |
thoracic cavity | 1.06e-08 | 34 |
anterior region of body | 1.38e-08 | 62 |
craniocervical region | 1.38e-08 | 62 |
mucosa | 1.72e-08 | 20 |
thoracic segment organ | 2.35e-08 | 35 |
foregut | 3.60e-08 | 87 |
extraembryonic membrane | 5.22e-08 | 14 |
membranous layer | 5.22e-08 | 14 |
gingival epithelium | 9.99e-08 | 3 |
subdivision of digestive tract | 1.26e-07 | 118 |
subdivision of head | 1.82e-07 | 49 |
mouth mucosa | 4.53e-07 | 13 |
endo-epithelium | 4.61e-07 | 82 |
lower respiratory tract epithelium | 5.14e-07 | 3 |
epithelium of bronchus | 5.14e-07 | 3 |
trachea | 5.37e-07 | 7 |
respiratory airway | 5.37e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.24e-13 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.