FFCP PHASE1:Hg19::chr11:71846716..71846730,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2352|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3795|TSSclassifier=S|UniProt=P41439|association_with_transcript=-25bp_to_ENST00000445078_5end|coexpression_cluster_id=C2161|description=CAGE_peak_3_at_FOLR3_5end|id=chr11:71846716..71846730,+|ontology_enrichment_celltype=CL:0000766!1.93e-64!76;CL:0002057!7.04e-63!42;CL:0000860!1.06e-60!45;CL:0002009!7.23e-59!65;CL:0002194!1.20e-58!63;CL:0000576!1.20e-58!63;CL:0000040!1.20e-58!63;CL:0000559!1.20e-58!63;CL:0000557!1.17e-52!71;CL:0000839!2.39e-51!70;CL:0000763!5.17e-42!112;CL:0000049!5.17e-42!112;CL:0000738!6.23e-39!140;CL:0002087!1.92e-34!119;CL:0000037!1.06e-29!172;CL:0000566!1.06e-29!172;CL:0002031!2.68e-29!124;CL:0002032!7.67e-28!165;CL:0000837!7.67e-28!165;CL:0000988!4.51e-27!182;CL:0000094!1.78e-12!8;CL:0002393!5.63e-10!9;CL:0002397!5.63e-10!9;CL:0000081!1.09e-08!11;CL:0000235!2.28e-08!10;CL:0000134!1.87e-07!358;CL:0002320!5.12e-07!365;CL:0000767!6.43e-07!3|ontology_enrichment_celltype_v019=CL:0000860;8.20e-64;33!CL:0002057;8.20e-64;33!CL:0000473;6.61e-58;39!CL:0000234;6.61e-58;39!CL:0000576;2.56e-47;48!CL:0000766;6.90e-35;69!CL:0000763;3.31e-19;100!CL:0000094;2.19e-15;8!CL:0002393;1.34e-13;6!CL:0002397;1.34e-13;6!CL:0002087;2.62e-11;104!CL:0000081;5.53e-11;11!CL:0000738;7.40e-11;136!CL:0000235;5.40e-09;6!CL:0000771;1.79e-08;2!CL:0000988;8.90e-07;177|ontology_enrichment_celltype_v019_2=CL:0000473,6.69e-84,48;CL:0000234,6.69e-84,48;CL:0000766,6.07e-77,72;CL:0000860,2.56e-76,42;CL:0002057,2.56e-76,42;CL:0002194,6.89e-69,59;CL:0000576,6.89e-69,59;CL:0000040,6.89e-69,59;CL:0000559,6.89e-69,59;CL:0002009,2.37e-66,61;CL:0000839,1.13e-60,66;CL:0000557,1.22e-59,67;CL:0000763,1.11e-50,108;CL:0000049,1.11e-50,108;CL:0000738,3.63e-42,136;CL:0002087,3.70e-37,115;CL:0002032,6.55e-34,161;CL:0000837,6.55e-34,161;CL:0000037,6.70e-34,168;CL:0002031,4.92e-33,120;CL:0000988,1.30e-31,177;CL:0000094,2.01e-15,8;CL:0000081,5.20e-11,11;CL:0000134,2.90e-10,354;CL:0002320,7.44e-10,361;CL:0002393,4.99e-09,9;CL:0002397,4.99e-09,9;CL:0000235,7.59e-09,6;CL:0000771,1.79e-08,2;CL:0000219,2.03e-08,386|ontology_enrichment_development_v019=CL:0002057;4.12e-54;42!CL:0000049;2.95e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.06e-63!102;UBERON:0003061!2.06e-63!102;UBERON:0002193!4.58e-60!112;UBERON:0002371!4.36e-45!80;UBERON:0001474!6.41e-41!86;UBERON:0002405!8.49e-36!115;UBERON:0004765!3.20e-34!101;UBERON:0001434!3.20e-34!101;UBERON:0003081!5.39e-23!216;UBERON:0000178!2.46e-18!15;UBERON:0000179!2.46e-18!15;UBERON:0000463!2.46e-18!15;UBERON:0002204!4.40e-15!167;UBERON:0000926!1.03e-07!448;UBERON:0004120!1.03e-07!448;UBERON:0006603!1.03e-07!448|ontology_enrichment_uberon_v019=UBERON:0000178;4.91e-22;15!UBERON:0000179;4.91e-22;15!UBERON:0000463;4.91e-22;15!UBERON:0002390;2.78e-12;32!UBERON:0002193;9.64e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-72,98;UBERON:0003061,1.32e-72,98;UBERON:0002193,1.03e-67,108;UBERON:0002371,1.57e-51,76;UBERON:0002405,6.75e-48,93;UBERON:0001474,4.18e-47,82;UBERON:0004765,4.11e-42,90;UBERON:0001434,5.48e-37,100;UBERON:0003081,3.07e-29,203;UBERON:0000178,5.15e-22,15;UBERON:0000179,5.15e-22,15;UBERON:0000463,5.15e-22,15;UBERON:0002204,1.88e-18,167;UBERON:0000926,9.18e-15,315;UBERON:0004120,9.18e-15,315;UBERON:0006603,9.18e-15,315;UBERON:0002384,2.68e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,16.5046641181801,0.619264493264304,0,0,0,0,0,0,2.76997704265939,2.60707781711184,2.17010870715852,1.11957737119962,0,0,4.79814187972564,0.755751887377619,1.21292030593908,4.41615170120801,2.05583944010913,0.929119112685311,2.58923153089935,2.56160706529101,1.6553756092201,3.10271112662957,1.93645405075148,0,6.21199720490596,2.18324920046277,0.449446968890169,2.44867113896722,3.20929027076094,1.27867425159808,3.95821560224059,2.99195486432448,2.13112375266347,2.90209238628584,1.70215567407342,1.24564449799115,3.01498398308092,1.0429658368404,1.95469960234605,1.81619850790011,3.31449872388808,0.632924774881769,3.38008458099107,0.850417199860174,3.35453832813401,82.1122293680879,10.5123824989054,7.87555374815693,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,2.49861453104692,1.65744076430812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.9451043590158,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.009028365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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3795 | |||
|TSSclassifier=S | |||
|UniProt=P41439 | |||
|association_with_transcript=-25bp_to_ENST00000445078_5end | |||
|coexpression_cluster_id=C2161 | |||
|description=CAGE_peak_3_at_FOLR3_5end | |||
|id=chr11:71846716..71846730,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.93e-64!76;CL:0002057!7.04e-63!42;CL:0000860!1.06e-60!45;CL:0002009!7.23e-59!65;CL:0002194!1.20e-58!63;CL:0000576!1.20e-58!63;CL:0000040!1.20e-58!63;CL:0000559!1.20e-58!63;CL:0000557!1.17e-52!71;CL:0000839!2.39e-51!70;CL:0000763!5.17e-42!112;CL:0000049!5.17e-42!112;CL:0000738!6.23e-39!140;CL:0002087!1.92e-34!119;CL:0000037!1.06e-29!172;CL:0000566!1.06e-29!172;CL:0002031!2.68e-29!124;CL:0002032!7.67e-28!165;CL:0000837!7.67e-28!165;CL:0000988!4.51e-27!182;CL:0000094!1.78e-12!8;CL:0002393!5.63e-10!9;CL:0002397!5.63e-10!9;CL:0000081!1.09e-08!11;CL:0000235!2.28e-08!10;CL:0000134!1.87e-07!358;CL:0002320!5.12e-07!365;CL:0000767!6.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.20e-64;33!CL:0002057;8.20e-64;33!CL:0000473;6.61e-58;39!CL:0000234;6.61e-58;39!CL:0000576;2.56e-47;48!CL:0000766;6.90e-35;69!CL:0000763;3.31e-19;100!CL:0000094;2.19e-15;8!CL:0002393;1.34e-13;6!CL:0002397;1.34e-13;6!CL:0002087;2.62e-11;104!CL:0000081;5.53e-11;11!CL:0000738;7.40e-11;136!CL:0000235;5.40e-09;6!CL:0000771;1.79e-08;2!CL:0000988;8.90e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.69e-84,48;CL:0000234,6.69e-84,48;CL:0000766,6.07e-77,72;CL:0000860,2.56e-76,42;CL:0002057,2.56e-76,42;CL:0002194,6.89e-69,59;CL:0000576,6.89e-69,59;CL:0000040,6.89e-69,59;CL:0000559,6.89e-69,59;CL:0002009,2.37e-66,61;CL:0000839,1.13e-60,66;CL:0000557,1.22e-59,67;CL:0000763,1.11e-50,108;CL:0000049,1.11e-50,108;CL:0000738,3.63e-42,136;CL:0002087,3.70e-37,115;CL:0002032,6.55e-34,161;CL:0000837,6.55e-34,161;CL:0000037,6.70e-34,168;CL:0002031,4.92e-33,120;CL:0000988,1.30e-31,177;CL:0000094,2.01e-15,8;CL:0000081,5.20e-11,11;CL:0000134,2.90e-10,354;CL:0002320,7.44e-10,361;CL:0002393,4.99e-09,9;CL:0002397,4.99e-09,9;CL:0000235,7.59e-09,6;CL:0000771,1.79e-08,2;CL:0000219,2.03e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-54;42!CL:0000049;2.95e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-63!102;UBERON:0003061!2.06e-63!102;UBERON:0002193!4.58e-60!112;UBERON:0002371!4.36e-45!80;UBERON:0001474!6.41e-41!86;UBERON:0002405!8.49e-36!115;UBERON:0004765!3.20e-34!101;UBERON:0001434!3.20e-34!101;UBERON:0003081!5.39e-23!216;UBERON:0000178!2.46e-18!15;UBERON:0000179!2.46e-18!15;UBERON:0000463!2.46e-18!15;UBERON:0002204!4.40e-15!167;UBERON:0000926!1.03e-07!448;UBERON:0004120!1.03e-07!448;UBERON:0006603!1.03e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.91e-22;15!UBERON:0000179;4.91e-22;15!UBERON:0000463;4.91e-22;15!UBERON:0002390;2.78e-12;32!UBERON:0002193;9.64e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-72,98;UBERON:0003061,1.32e-72,98;UBERON:0002193,1.03e-67,108;UBERON:0002371,1.57e-51,76;UBERON:0002405,6.75e-48,93;UBERON:0001474,4.18e-47,82;UBERON:0004765,4.11e-42,90;UBERON:0001434,5.48e-37,100;UBERON:0003081,3.07e-29,203;UBERON:0000178,5.15e-22,15;UBERON:0000179,5.15e-22,15;UBERON:0000463,5.15e-22,15;UBERON:0002204,1.88e-18,167;UBERON:0000926,9.18e-15,315;UBERON:0004120,9.18e-15,315;UBERON:0006603,9.18e-15,315;UBERON:0002384,2.68e-09,371 | |||
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|short_description=p3@FOLR3 | |||
}} |
Revision as of 19:29, 10 September 2013
Short description: | p3@FOLR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FOLR3_5end |
Coexpression cluster: | C2161_CD14_Peripheral_Eosinophils_Basophils_Whole_acute_blood |
Association with transcript: | -25bp_to_ENST00000445078_5end |
EntrezGene: | FOLR3 |
HGNC: | 3795 |
UniProt: | P41439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.69e-84 | 48 |
phagocyte | 6.69e-84 | 48 |
myeloid leukocyte | 6.07e-77 | 72 |
classical monocyte | 2.56e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-76 | 42 |
monopoietic cell | 6.89e-69 | 59 |
monocyte | 6.89e-69 | 59 |
monoblast | 6.89e-69 | 59 |
promonocyte | 6.89e-69 | 59 |
macrophage dendritic cell progenitor | 2.37e-66 | 61 |
myeloid lineage restricted progenitor cell | 1.13e-60 | 66 |
granulocyte monocyte progenitor cell | 1.22e-59 | 67 |
myeloid cell | 1.11e-50 | 108 |
common myeloid progenitor | 1.11e-50 | 108 |
leukocyte | 3.63e-42 | 136 |
nongranular leukocyte | 3.70e-37 | 115 |
hematopoietic oligopotent progenitor cell | 6.55e-34 | 161 |
hematopoietic multipotent progenitor cell | 6.55e-34 | 161 |
hematopoietic stem cell | 6.70e-34 | 168 |
hematopoietic lineage restricted progenitor cell | 4.92e-33 | 120 |
hematopoietic cell | 1.30e-31 | 177 |
granulocyte | 2.01e-15 | 8 |
blood cell | 5.20e-11 | 11 |
mesenchymal cell | 2.90e-10 | 354 |
connective tissue cell | 7.44e-10 | 361 |
intermediate monocyte | 4.99e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.99e-09 | 9 |
macrophage | 7.59e-09 | 6 |
eosinophil | 1.79e-08 | 2 |
motile cell | 2.03e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.32e-72 | 98 |
blood island | 1.32e-72 | 98 |
hemolymphoid system | 1.03e-67 | 108 |
bone marrow | 1.57e-51 | 76 |
immune system | 6.75e-48 | 93 |
bone element | 4.18e-47 | 82 |
skeletal element | 4.11e-42 | 90 |
skeletal system | 5.48e-37 | 100 |
lateral plate mesoderm | 3.07e-29 | 203 |
blood | 5.15e-22 | 15 |
haemolymphatic fluid | 5.15e-22 | 15 |
organism substance | 5.15e-22 | 15 |
musculoskeletal system | 1.88e-18 | 167 |
mesoderm | 9.18e-15 | 315 |
mesoderm-derived structure | 9.18e-15 | 315 |
presumptive mesoderm | 9.18e-15 | 315 |
connective tissue | 2.68e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.