FFCP PHASE1:Hg19::chr11:73687776..73687798,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C658|description=CAGE_peak_at_chr11:73687776..73687798,-|id=chr11:73687776..73687798,-|ontology_enrichment_celltype=CL:0000037!7.01e-41!172;CL:0000566!7.01e-41!172;CL:0000988!1.61e-40!182;CL:0000738!7.96e-39!140;CL:0002032!1.86e-37!165;CL:0000837!1.86e-37!165;CL:0002031!2.08e-36!124;CL:0002087!5.49e-35!119;CL:0000763!3.05e-22!112;CL:0000049!3.05e-22!112;CL:0000839!1.39e-21!70;CL:0000557!1.74e-20!71;CL:0002009!3.77e-20!65;CL:0002194!3.14e-19!63;CL:0000576!3.14e-19!63;CL:0000040!3.14e-19!63;CL:0000559!3.14e-19!63;CL:0000766!4.50e-19!76;CL:0000860!3.96e-15!45;CL:0002057!2.03e-14!42;CL:0000542!5.99e-14!53;CL:0000051!5.99e-14!53;CL:0000838!2.17e-13!52;CL:0000084!4.54e-08!25;CL:0000827!4.54e-08!25|ontology_enrichment_celltype_v019=CL:0000473;2.00e-08;39!CL:0000234;2.00e-08;39!CL:0000235;2.23e-08;6!CL:0000738;2.68e-08;136!CL:0000542;6.02e-08;53!CL:0000766;7.34e-08;69!CL:0000945;3.62e-07;24!CL:0002087;6.02e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,2.56e-26,136;CL:0002087,1.05e-25,115;CL:0000037,1.38e-24,168;CL:0002031,2.76e-24,120;CL:0000988,1.22e-23,177;CL:0002032,5.36e-22,161;CL:0000837,5.36e-22,161;CL:0002009,6.33e-15,61;CL:0000839,1.01e-14,66;CL:0002194,2.36e-14,59;CL:0000576,2.36e-14,59;CL:0000040,2.36e-14,59;CL:0000559,2.36e-14,59;CL:0000473,7.78e-14,48;CL:0000234,7.78e-14,48;CL:0000557,6.29e-13,67;CL:0000766,1.67e-12,72;CL:0000763,4.90e-12,108;CL:0000049,4.90e-12,108;CL:0000542,3.44e-10,53;CL:0000051,3.44e-10,53;CL:0000838,2.52e-09,52;CL:0000860,3.18e-09,42;CL:0002057,3.18e-09,42;CL:0000235,4.94e-08,6;CL:0000945,1.56e-07,24;CL:0000826,1.56e-07,24|ontology_enrichment_development_v019=CL:0000051;6.02e-08;53!CL:0002057;6.11e-07;42|ontology_enrichment_disease=DOID:2531!9.11e-07!51;DOID:0060083!9.11e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.97e-24!102;UBERON:0003061!4.97e-24!102;UBERON:0002193!1.49e-21!112;UBERON:0002371!5.37e-17!80;UBERON:0001474!1.80e-15!86;UBERON:0002405!1.31e-11!115;UBERON:0004765!2.72e-10!101;UBERON:0001434!2.72e-10!101|ontology_enrichment_uberon_v019=UBERON:0000178;6.25e-09;15!UBERON:0000179;6.25e-09;15!UBERON:0000463;6.25e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-18,98;UBERON:0003061,3.15e-18,98;UBERON:0002193,1.23e-16,108;UBERON:0002371,1.20e-11,76;UBERON:0002405,9.34e-11,93;UBERON:0001474,2.96e-10,82;UBERON:0000178,7.55e-09,15;UBERON:0000179,7.55e-09,15;UBERON:0000463,7.55e-09,15;UBERON:0004765,1.04e-08,90;UBERON:0001434,3.70e-07,100|phase1_expression=0,4.71021152560163,0.704772020479856,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0.783556884599516,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0.816002764977012,0,0,0.136874425072884,0.502170558379211,0.382067028739756,0,0.314843125254717,0,0.383829398097213,1.08371286321253,0,0,0,3.33108962495297,1.70603078984906,0.293600439334847,0.553995408531877,1.20326668482085,1.51907609501096,0.223915474239924,2.26725566213286,1.03030227053675,2.90796477559129,1.51150377475524,0.727752183563449,0.929716147622738,1.6446715520873,0.309706370895104,0.575384784644301,1.2808035326455,0.236482229888585,0,0.645484683583826,0,2.44715041405386,0.818718450173537,0.224723484445085,0.306083892370903,0.641858054152187,1.91801137739712,0.989553900560148,1.59570926097305,0.852449501065388,0.290209238628584,0.56738522469114,0,1.00499466102697,2.08593167368081,0.217188844705117,0.605399502633369,0.736555271975129,1.26584954976354,2.11255286311942,2.33864729961548,0.838634582033504,1.34794357375794,1.05123824989054,1.76798145366788,0.285012743741249,1.59133341759272,0.730656615058536,0,1.63841583378639,0,0,1.20118796110804,1.72425731986345,0.661044872784862,1.90810750907073,3.98449078376614,1.76171156811282,0.382273228125229,0,0,0.790152254325231,0.590129310341499,0.393010762749165,2.67281948699362,1.83905144929746,0.977766799900771,0.946895611469467,0,4.79064964606246,0.883817722424512,1.77227115666897,1.89562704635511,5.50792674820403,4.55207716459574,2.30213066445147,2.76350017785848,2.31842468588042,1.4828656316206,2.94294910898684,4.18142095219907,1.47302145506836,1.53288197440768,0.68725489096526,3.79529538029254,0.637130828648193,0,0,0.602300476311091,2.04778577847069,2.49861453104692,1.65744076430812,0.821127996921047,0.201606743224732,1.06976078313403,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.665188192387692,0.966182642624386,0,0,0,0.97364218096405,1.0447784237956,0.930705723632056,1.43094374583205,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.737005903870608,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C658 | |||
|description=CAGE_peak_at_chr11:73687776..73687798,- | |||
|id=chr11:73687776..73687798,- | |||
|ontology_enrichment_celltype=CL:0000037!7.01e-41!172;CL:0000566!7.01e-41!172;CL:0000988!1.61e-40!182;CL:0000738!7.96e-39!140;CL:0002032!1.86e-37!165;CL:0000837!1.86e-37!165;CL:0002031!2.08e-36!124;CL:0002087!5.49e-35!119;CL:0000763!3.05e-22!112;CL:0000049!3.05e-22!112;CL:0000839!1.39e-21!70;CL:0000557!1.74e-20!71;CL:0002009!3.77e-20!65;CL:0002194!3.14e-19!63;CL:0000576!3.14e-19!63;CL:0000040!3.14e-19!63;CL:0000559!3.14e-19!63;CL:0000766!4.50e-19!76;CL:0000860!3.96e-15!45;CL:0002057!2.03e-14!42;CL:0000542!5.99e-14!53;CL:0000051!5.99e-14!53;CL:0000838!2.17e-13!52;CL:0000084!4.54e-08!25;CL:0000827!4.54e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.00e-08;39!CL:0000234;2.00e-08;39!CL:0000235;2.23e-08;6!CL:0000738;2.68e-08;136!CL:0000542;6.02e-08;53!CL:0000766;7.34e-08;69!CL:0000945;3.62e-07;24!CL:0002087;6.02e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.56e-26,136;CL:0002087,1.05e-25,115;CL:0000037,1.38e-24,168;CL:0002031,2.76e-24,120;CL:0000988,1.22e-23,177;CL:0002032,5.36e-22,161;CL:0000837,5.36e-22,161;CL:0002009,6.33e-15,61;CL:0000839,1.01e-14,66;CL:0002194,2.36e-14,59;CL:0000576,2.36e-14,59;CL:0000040,2.36e-14,59;CL:0000559,2.36e-14,59;CL:0000473,7.78e-14,48;CL:0000234,7.78e-14,48;CL:0000557,6.29e-13,67;CL:0000766,1.67e-12,72;CL:0000763,4.90e-12,108;CL:0000049,4.90e-12,108;CL:0000542,3.44e-10,53;CL:0000051,3.44e-10,53;CL:0000838,2.52e-09,52;CL:0000860,3.18e-09,42;CL:0002057,3.18e-09,42;CL:0000235,4.94e-08,6;CL:0000945,1.56e-07,24;CL:0000826,1.56e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;6.02e-08;53!CL:0002057;6.11e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!9.11e-07!51;DOID:0060083!9.11e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.97e-24!102;UBERON:0003061!4.97e-24!102;UBERON:0002193!1.49e-21!112;UBERON:0002371!5.37e-17!80;UBERON:0001474!1.80e-15!86;UBERON:0002405!1.31e-11!115;UBERON:0004765!2.72e-10!101;UBERON:0001434!2.72e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.25e-09;15!UBERON:0000179;6.25e-09;15!UBERON:0000463;6.25e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-18,98;UBERON:0003061,3.15e-18,98;UBERON:0002193,1.23e-16,108;UBERON:0002371,1.20e-11,76;UBERON:0002405,9.34e-11,93;UBERON:0001474,2.96e-10,82;UBERON:0000178,7.55e-09,15;UBERON:0000179,7.55e-09,15;UBERON:0000463,7.55e-09,15;UBERON:0004765,1.04e-08,90;UBERON:0001434,3.70e-07,100 | |||
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| |||
|short_description=p@chr11:73687776..73687798,- | |||
}} |
Revision as of 19:38, 10 September 2013
Short description: | p@chr11:73687776..73687798, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:73687776..73687798, - |
Coexpression cluster: | C658_Monocytederived_CD4_mycosis_Whole_Neutrophils_mucinous_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.56e-26 | 136 |
nongranular leukocyte | 1.05e-25 | 115 |
hematopoietic stem cell | 1.38e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 2.76e-24 | 120 |
hematopoietic cell | 1.22e-23 | 177 |
hematopoietic oligopotent progenitor cell | 5.36e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.36e-22 | 161 |
macrophage dendritic cell progenitor | 6.33e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.01e-14 | 66 |
monopoietic cell | 2.36e-14 | 59 |
monocyte | 2.36e-14 | 59 |
monoblast | 2.36e-14 | 59 |
promonocyte | 2.36e-14 | 59 |
defensive cell | 7.78e-14 | 48 |
phagocyte | 7.78e-14 | 48 |
granulocyte monocyte progenitor cell | 6.29e-13 | 67 |
myeloid leukocyte | 1.67e-12 | 72 |
myeloid cell | 4.90e-12 | 108 |
common myeloid progenitor | 4.90e-12 | 108 |
lymphocyte | 3.44e-10 | 53 |
common lymphoid progenitor | 3.44e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.52e-09 | 52 |
classical monocyte | 3.18e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-09 | 42 |
macrophage | 4.94e-08 | 6 |
lymphocyte of B lineage | 1.56e-07 | 24 |
pro-B cell | 1.56e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.15e-18 | 98 |
blood island | 3.15e-18 | 98 |
hemolymphoid system | 1.23e-16 | 108 |
bone marrow | 1.20e-11 | 76 |
immune system | 9.34e-11 | 93 |
bone element | 2.96e-10 | 82 |
blood | 7.55e-09 | 15 |
haemolymphatic fluid | 7.55e-09 | 15 |
organism substance | 7.55e-09 | 15 |
skeletal element | 1.04e-08 | 90 |
skeletal system | 3.70e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.