FFCP PHASE1:Hg19::chr13:33924303..33924330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:33924303..33924330,+|id=chr13:33924303..33924330,+|ontology_enrichment_celltype=CL:0000839!7.35e-16!70;CL:0000557!2.08e-15!71;CL:0000766!2.26e-14!76;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0002009!6.50e-13!65;CL:0002057!2.91e-12!42;CL:0000860!9.60e-11!45;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9|ontology_enrichment_celltype_v019=CL:0000097;9.33e-16;5!CL:0002393;7.95e-13;6!CL:0002397;7.95e-13;6!CL:0000576;2.95e-12;48!CL:0002619;1.77e-11;3!CL:0000766;5.09e-11;69!CL:0000163;5.61e-09;9|ontology_enrichment_celltype_v019_2=CL:0000839,5.39e-21,66;CL:0000557,1.19e-20,67;CL:0000766,4.59e-19,72;CL:0000097,9.35e-16,5;CL:0002028,9.35e-16,5;CL:0002393,1.08e-14,9;CL:0002397,1.08e-14,9;CL:0002194,3.44e-14,59;CL:0000576,3.44e-14,59;CL:0000040,3.44e-14,59;CL:0000559,3.44e-14,59;CL:0002009,1.13e-13,61;CL:0000473,4.27e-12,48;CL:0000234,4.27e-12,48;CL:0000763,6.11e-12,108;CL:0000049,6.11e-12,108;CL:0002619,1.29e-11,3;CL:0000860,4.14e-11,42;CL:0002057,4.14e-11,42;CL:0002031,1.66e-10,120;CL:0000738,5.49e-09,136;CL:0000163,5.62e-09,9;CL:0002032,3.25e-07,161;CL:0000837,3.25e-07,161;CL:0000037,8.19e-07,168|ontology_enrichment_development_v019=CL:0002057;1.10e-08;42!UBERON:0007123;2.25e-07;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.48e-16!167;UBERON:0004765!9.54e-14!101;UBERON:0001434!9.54e-14!101;UBERON:0002371!1.22e-13!80;UBERON:0001474!7.48e-13!86;UBERON:0002193!6.87e-11!112;UBERON:0002390!9.15e-11!102;UBERON:0003061!9.15e-11!102;UBERON:0002405!6.56e-09!115;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.16e-08!626;UBERON:0003081!2.10e-08!216;UBERON:0000468!4.35e-08!659;UBERON:0000926!5.48e-07!448;UBERON:0004120!5.48e-07!448;UBERON:0006603!5.48e-07!448;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605|ontology_enrichment_uberon_v019=UBERON:0001000;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0002046;2.25e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.35e-21,76;UBERON:0001474,4.63e-19,82;UBERON:0004765,3.78e-17,90;UBERON:0002405,1.63e-16,93;UBERON:0002390,1.52e-15,98;UBERON:0003061,1.52e-15,98;UBERON:0001434,3.49e-15,100;UBERON:0002193,7.18e-14,108;UBERON:0001000,1.84e-09,1;UBERON:0005352,1.84e-09,1;UBERON:0002204,4.79e-08,167;UBERON:0002046,2.21e-07,5;UBERON:0004117,2.21e-07,5;UBERON:0007689,2.21e-07,5;UBERON:0007123,2.21e-07,5;UBERON:0003091,2.21e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0.928896739896456,0,0.6024118375565,0,0,0,0,0,0.802177789880567,0.434021741431704,1.34349284543955,0.647787332037959,1.54545340580512,0.145398238779565,0.755751887377619,0.242584061187816,0.929716147622738,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0,0,1.13477044938228,0,0.502497330513487,2.08593167368081,0,0,1.10483290796269,0,3.16882929467913,1.27562579979026,2.51590374610051,0.898629049171961,0.300353785683013,0.32145117339416,1.42506371870624,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0.728590576585084,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0,0,0,0.66944122552934,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0.280901613404497,0,0.368502951935304,0.413303124703062,1.18800285728205,0.741800787835671,0.910161361938026,0,0,0.250237039743928,0,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.412210116953756,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,4.35389042635621,5.04419836959365,4.292242736496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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:33924303..33924330,+ | |||
|id=chr13:33924303..33924330,+ | |||
|ontology_enrichment_celltype=CL:0000839!7.35e-16!70;CL:0000557!2.08e-15!71;CL:0000766!2.26e-14!76;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0002009!6.50e-13!65;CL:0002057!2.91e-12!42;CL:0000860!9.60e-11!45;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.33e-16;5!CL:0002393;7.95e-13;6!CL:0002397;7.95e-13;6!CL:0000576;2.95e-12;48!CL:0002619;1.77e-11;3!CL:0000766;5.09e-11;69!CL:0000163;5.61e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.39e-21,66;CL:0000557,1.19e-20,67;CL:0000766,4.59e-19,72;CL:0000097,9.35e-16,5;CL:0002028,9.35e-16,5;CL:0002393,1.08e-14,9;CL:0002397,1.08e-14,9;CL:0002194,3.44e-14,59;CL:0000576,3.44e-14,59;CL:0000040,3.44e-14,59;CL:0000559,3.44e-14,59;CL:0002009,1.13e-13,61;CL:0000473,4.27e-12,48;CL:0000234,4.27e-12,48;CL:0000763,6.11e-12,108;CL:0000049,6.11e-12,108;CL:0002619,1.29e-11,3;CL:0000860,4.14e-11,42;CL:0002057,4.14e-11,42;CL:0002031,1.66e-10,120;CL:0000738,5.49e-09,136;CL:0000163,5.62e-09,9;CL:0002032,3.25e-07,161;CL:0000837,3.25e-07,161;CL:0000037,8.19e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-08;42!UBERON:0007123;2.25e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.48e-16!167;UBERON:0004765!9.54e-14!101;UBERON:0001434!9.54e-14!101;UBERON:0002371!1.22e-13!80;UBERON:0001474!7.48e-13!86;UBERON:0002193!6.87e-11!112;UBERON:0002390!9.15e-11!102;UBERON:0003061!9.15e-11!102;UBERON:0002405!6.56e-09!115;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.16e-08!626;UBERON:0003081!2.10e-08!216;UBERON:0000468!4.35e-08!659;UBERON:0000926!5.48e-07!448;UBERON:0004120!5.48e-07!448;UBERON:0006603!5.48e-07!448;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0002046;2.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.35e-21,76;UBERON:0001474,4.63e-19,82;UBERON:0004765,3.78e-17,90;UBERON:0002405,1.63e-16,93;UBERON:0002390,1.52e-15,98;UBERON:0003061,1.52e-15,98;UBERON:0001434,3.49e-15,100;UBERON:0002193,7.18e-14,108;UBERON:0001000,1.84e-09,1;UBERON:0005352,1.84e-09,1;UBERON:0002204,4.79e-08,167;UBERON:0002046,2.21e-07,5;UBERON:0004117,2.21e-07,5;UBERON:0007689,2.21e-07,5;UBERON:0007123,2.21e-07,5;UBERON:0003091,2.21e-07,5 | |||
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| |||
|short_description=p@chr13:33924303..33924330,+ | |||
}} |
Revision as of 02:05, 11 September 2013
Short description: | p@chr13:33924303..33924330, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:33924303..33924330, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.39e-21 | 66 |
granulocyte monocyte progenitor cell | 1.19e-20 | 67 |
myeloid leukocyte | 4.59e-19 | 72 |
mast cell | 9.35e-16 | 5 |
basophil mast progenitor cell | 9.35e-16 | 5 |
intermediate monocyte | 1.08e-14 | 9 |
CD14-positive, CD16-positive monocyte | 1.08e-14 | 9 |
monopoietic cell | 3.44e-14 | 59 |
monocyte | 3.44e-14 | 59 |
monoblast | 3.44e-14 | 59 |
promonocyte | 3.44e-14 | 59 |
macrophage dendritic cell progenitor | 1.13e-13 | 61 |
defensive cell | 4.27e-12 | 48 |
phagocyte | 4.27e-12 | 48 |
myeloid cell | 6.11e-12 | 108 |
common myeloid progenitor | 6.11e-12 | 108 |
adult endothelial progenitor cell | 1.29e-11 | 3 |
classical monocyte | 4.14e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 1.66e-10 | 120 |
leukocyte | 5.49e-09 | 136 |
endocrine cell | 5.62e-09 | 9 |
hematopoietic oligopotent progenitor cell | 3.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.25e-07 | 161 |
hematopoietic stem cell | 8.19e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.35e-21 | 76 |
bone element | 4.63e-19 | 82 |
skeletal element | 3.78e-17 | 90 |
immune system | 1.63e-16 | 93 |
hematopoietic system | 1.52e-15 | 98 |
blood island | 1.52e-15 | 98 |
skeletal system | 3.49e-15 | 100 |
hemolymphoid system | 7.18e-14 | 108 |
vas deferens | 1.84e-09 | 1 |
spermatic cord | 1.84e-09 | 1 |
musculoskeletal system | 4.79e-08 | 167 |
thyroid gland | 2.21e-07 | 5 |
pharyngeal pouch | 2.21e-07 | 5 |
thyroid diverticulum | 2.21e-07 | 5 |
pharyngeal pouch 2 | 2.21e-07 | 5 |
thyroid primordium | 2.21e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.