FFCP PHASE1:Hg19::chr15:23034322..23034432,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81614|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17044|TSSclassifier=S|UniProt=Q8N8Q9,F8W7Y8|association_with_transcript=0bp_to_ENST00000337451,ENST00000359727,ENST00000398013,ENST00000398014,ENST00000539711,ENST00000559571,ENST00000560039,ENST00000560205,ENST00000560762,ENST00000561072,NM_001008860,NM_001008892,NM_001008894,NM_001184888,NM_001184889,NM_030922,uc001yux.2,uc001yuy.2,uc001yuz.2,uc001yva.2,uc001yvb.2,uc010ayb.2_5end|description=CAGE_peak_1_at_NIPA2_5end|id=chr15:23034322..23034432,-|ontology_enrichment_celltype=CL:0000012!1.52e-38!682;CL:0000548!8.32e-38!679;CL:0000004!8.32e-38!679;CL:0000255!8.32e-38!679;CL:0000003!3.03e-27!722;CL:0000144!2.03e-26!625;CL:0000063!5.03e-23!578;CL:0002371!1.18e-21!591;CL:0002032!1.86e-17!165;CL:0000837!1.86e-17!165;CL:0000988!2.15e-17!182;CL:0000037!3.54e-17!172;CL:0000566!3.54e-17!172;CL:0000738!1.54e-15!140;CL:0002087!4.01e-15!119;CL:0002031!2.68e-14!124;CL:0000034!7.62e-12!444;CL:0000763!1.48e-11!112;CL:0000049!1.48e-11!112;CL:0000766!2.75e-11!76;CL:0000723!4.15e-11!436;CL:0002009!7.12e-11!65;CL:0000048!7.67e-11!430;CL:0002194!1.02e-10!63;CL:0000576!1.02e-10!63;CL:0000040!1.02e-10!63;CL:0000559!1.02e-10!63;CL:0000219!1.35e-10!390;CL:0000945!1.63e-10!24;CL:0000826!1.63e-10!24;CL:0000557!5.61e-10!71;CL:0000839!3.78e-09!70;CL:0000134!1.77e-08!358;CL:0000236!2.58e-08!14;CL:0000860!4.24e-08!45;CL:0002320!6.43e-08!365;CL:0002057!1.27e-07!42|ontology_enrichment_celltype_v019=CL:0000945;1.55e-10;24!CL:0000860;1.51e-08;33!CL:0002057;1.51e-08;33!CL:0000236;8.97e-08;13!CL:0000473;2.51e-07;39!CL:0000234;2.51e-07;39|ontology_enrichment_celltype_v019_2=CL:0002032,5.21e-17,161;CL:0000837,5.21e-17,161;CL:0000037,9.96e-17,168;CL:0000988,1.14e-16,177;CL:0000738,4.07e-15,136;CL:0002087,1.01e-14,115;CL:0002031,6.82e-14,120;CL:0000763,3.63e-11,108;CL:0000049,3.63e-11,108;CL:0000034,4.90e-11,441;CL:0000766,6.18e-11,72;CL:0002009,1.52e-10,61;CL:0000945,1.63e-10,24;CL:0000826,1.63e-10,24;CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0000723,2.49e-10,433;CL:0000048,4.47e-10,427;CL:0000219,5.81e-10,386;CL:0000557,1.26e-09,67;CL:0000839,8.53e-09,66;CL:0000236,2.58e-08,14;CL:0000134,6.35e-08,354;CL:0000473,6.66e-08,48;CL:0000234,6.66e-08,48;CL:0000860,1.27e-07,42;CL:0002057,1.27e-07,42;CL:0002320,2.20e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!4.48e-09!239;DOID:162!7.44e-09!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,4.48e-09,239;DOID:162,7.44e-09,235|ontology_enrichment_uberon=UBERON:0002371!4.83e-09!80;UBERON:0001474!5.81e-09!86;UBERON:0004765!7.68e-08!101;UBERON:0001434!7.68e-08!101;UBERON:0002384!1.16e-07!375;UBERON:0002193!3.63e-07!112;UBERON:0002390!8.17e-07!102;UBERON:0003061!8.17e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004765,9.24e-09,90;UBERON:0002371,1.11e-08,76;UBERON:0001474,1.35e-08,82;UBERON:0002405,3.71e-08,93;UBERON:0001434,3.29e-07,100;UBERON:0002384,3.88e-07,371;UBERON:0002193,8.14e-07,108|phase1_expression=44.1478461627453,34.0419832986663,41.8634580165034,34.0249214400643,32.628159893192,29.6595098194125,20.2639902534648,48.642430253866,21.1560358841869,66.3481628554074,31.4010525587592,56.3578740095844,41.9389495383241,39.4814665942549,38.4420955844382,47.0627602516243,28.9293373451509,36.5155045193687,32.691497518964,45.5547914884115,36.1081223502328,26.3301966041594,56.9609614390803,52.012281527696,59.5072111679365,67.0145568409533,64.3668621287575,68.3209581802736,42.8767061765305,56.8067509183875,44.2774112683977,43.2127975505096,52.7110357861938,43.6309731996809,54.5369092085324,64.1183238518271,44.3336663395619,36.5636969631039,38.1034450193269,30.1645110295034,38.7373770435069,40.8106019183914,44.5605732007143,47.8360205584768,55.547763722255,50.9426528494414,64.3828432228746,74.0102198439286,69.6839334513983,67.3200198033832,75.5674084260847,77.0932069436788,42.4037187306041,53.5752287374576,58.233389235567,58.9198522768353,64.9516637137673,73.7093028979878,59.0741912275842,62.9020893069143,48.5896215607271,72.2374347408908,62.0331975203275,66.0648363325676,81.5487960546321,78.2991610073773,74.738669879469,67.0833936235504,49.5408772499191,72.1066964420987,72.6479403160043,74.7603601054756,84.4954574467161,54.9263744411049,53.3636792912259,45.7055847208259,45.2684383520375,41.1484686385727,43.3959084082116,45.0320135111173,46.9443358189853,52.2419479766853,54.55883578301,80.8285144667955,78.2768143399928,83.2123934004689,78.8780094460945,79.8905891536732,80.6474744797532,85.8648379081828,76.8437508297755,89.8472899737536,86.3937495563017,30.3994055731759,66.1400104318213,53.2035851245656,38.7518247124251,42.838173139659,46.6715402728886,33.4372990781356,35.5255270630614,43.0837503218607,21.4309401248702,32.5318534104707,40.9502211390024,39.8761010250518,35.475306153217,24.849716026781,33.6853710180085,26.803378450399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795,52.4399055400292,44.1734046115803,67.9474124451785,52.5542625095397,66.5945453663428,45.4753084680924,47.3734107551353,66.4046089340835,29.5320306457202,28.960456033869,66.877996061185,61.0604862391152,52.9670730696066,58.9847099841378,53.0491865698717,24.3098598040026,37.4447157894895,26.8633261622231,59.5986793020676,66.4430670223483,53.536811221602,22.9567705542389,56.2578327374732,60.4729983867554,58.0322974108414,56.5179518489931,23.7804510180977,26.8907226198356,39.3279927327555,29.9324671488195,46.848208385037,50.6292192032662,66.5633188579675,35.1977816704677,67.3224814370029,75.0857311321156,29.5108295854755,48.7880768167378,46.0203580396972,48.5220262825719,45.7861849267073,62.7540402328688,35.0703050338649,34.1826167541004,53.97494452538,19.7694675694565,54.407800509702,55.3058468793511,43.8846003901718,94.8706792365078,48.8348156454136,35.2675943690684,48.999276376512,31.4723202972652,28.339315265117,22.0294725498869,28.1009419009834,26.9716714957238,32.7805376680393,19.7000287670858,7.13847101295772,64.3849033366728,50.0191626994419,40.5377202732911,59.6112437335745,49.1982903152646,51.0866345284474,60.2716153012312,26.32361492224,29.6506450994174,31.2605604493237,66.7862070927627,39.9603478724636,57.0724492797795,37.6184346324458,24.2134210570293,19.8419324641137,34.1811216945158,28.9896648779656,43.8606213485746,18.3598136004039,37.2847038042396,75.6353571626404,26.2493899580361,36.6549257218518,32.7761426287781,35.7429640421537,40.0934713135128,77.6677076125952,25.3802253967379,26.7121050598949,33.3467961963645,74.9348951204358,87.3166504852743,16.1695771272059,21.5248358184923,38.9578307006167,34.7000313793608,52.2544770749064,38.6978867188511,30.3060547309023,41.7155934974398,51.1462271619751,47.6371666109068,37.6804341423219,27.1453175053578,24.4127422244348,22.1203091780509,41.3018264467467,80.1107644945927,84.5316975210844,16.5120949574462,55.4438621876601,42.8084812216761,36.3104796811425,32.4380752213598,48.0936144714691,60.5932087161879,14.8908632553216,13.9621417324496,24.3561030581022,21.8569946876613,82.1127516751991,34.020582552594,40.3139107735957,61.3297225471553,36.6101920762279,26.5694604677345,49.3142870309766,39.3407208907123,48.9129988215984,17.4055308445273,52.320193456561,16.6862197047703,24.060758426494,28.3179337480878,46.390102309774,58.5519809014488,45.3138952454248,75.6554550351712,41.9601755723295,51.522651270491,146.199770107665,40.1685013535584,38.0745305225769,18.7774853928401,19.8792168363413,32.5679238014481,21.8175345170189,34.9157714740164,26.7836413080061,30.5035914896736,30.716485910789,41.634920195576,136.363433810692,32.6882132609507,70.2703036922254,33.9366104687262,107.976506953443,36.3525931973944,21.52115029398,30.8158749679605,15.7542193497168,19.3419702261744,21.5366321719991,26.1870874610114,32.4236327376751,31.471880148,45.0770087574066,26.5408650019948,35.1683908787302,25.2551427560475,27.0364307857372,43.0379618763214,35.8611026963382,26.2801681671351,53.4005442087993,20.2781957167659,77.228912914776,65.9316983462348,25.81050366438,32.3939827084596,28.4827324821017,13.9808922578958,34.4178187040655,67.3193833836789|short_description=p1@NIPA2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=81614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17044 | |||
|TSSclassifier=S | |||
|UniProt=Q8N8Q9,F8W7Y8 | |||
|association_with_transcript=0bp_to_ENST00000337451,ENST00000359727,ENST00000398013,ENST00000398014,ENST00000539711,ENST00000559571,ENST00000560039,ENST00000560205,ENST00000560762,ENST00000561072,NM_001008860,NM_001008892,NM_001008894,NM_001184888,NM_001184889,NM_030922,uc001yux.2,uc001yuy.2,uc001yuz.2,uc001yva.2,uc001yvb.2,uc010ayb.2_5end | |||
|description=CAGE_peak_1_at_NIPA2_5end | |||
|id=chr15:23034322..23034432,- | |||
|ontology_enrichment_celltype=CL:0000012!1.52e-38!682;CL:0000548!8.32e-38!679;CL:0000004!8.32e-38!679;CL:0000255!8.32e-38!679;CL:0000003!3.03e-27!722;CL:0000144!2.03e-26!625;CL:0000063!5.03e-23!578;CL:0002371!1.18e-21!591;CL:0002032!1.86e-17!165;CL:0000837!1.86e-17!165;CL:0000988!2.15e-17!182;CL:0000037!3.54e-17!172;CL:0000566!3.54e-17!172;CL:0000738!1.54e-15!140;CL:0002087!4.01e-15!119;CL:0002031!2.68e-14!124;CL:0000034!7.62e-12!444;CL:0000763!1.48e-11!112;CL:0000049!1.48e-11!112;CL:0000766!2.75e-11!76;CL:0000723!4.15e-11!436;CL:0002009!7.12e-11!65;CL:0000048!7.67e-11!430;CL:0002194!1.02e-10!63;CL:0000576!1.02e-10!63;CL:0000040!1.02e-10!63;CL:0000559!1.02e-10!63;CL:0000219!1.35e-10!390;CL:0000945!1.63e-10!24;CL:0000826!1.63e-10!24;CL:0000557!5.61e-10!71;CL:0000839!3.78e-09!70;CL:0000134!1.77e-08!358;CL:0000236!2.58e-08!14;CL:0000860!4.24e-08!45;CL:0002320!6.43e-08!365;CL:0002057!1.27e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.55e-10;24!CL:0000860;1.51e-08;33!CL:0002057;1.51e-08;33!CL:0000236;8.97e-08;13!CL:0000473;2.51e-07;39!CL:0000234;2.51e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,5.21e-17,161;CL:0000837,5.21e-17,161;CL:0000037,9.96e-17,168;CL:0000988,1.14e-16,177;CL:0000738,4.07e-15,136;CL:0002087,1.01e-14,115;CL:0002031,6.82e-14,120;CL:0000763,3.63e-11,108;CL:0000049,3.63e-11,108;CL:0000034,4.90e-11,441;CL:0000766,6.18e-11,72;CL:0002009,1.52e-10,61;CL:0000945,1.63e-10,24;CL:0000826,1.63e-10,24;CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0000723,2.49e-10,433;CL:0000048,4.47e-10,427;CL:0000219,5.81e-10,386;CL:0000557,1.26e-09,67;CL:0000839,8.53e-09,66;CL:0000236,2.58e-08,14;CL:0000134,6.35e-08,354;CL:0000473,6.66e-08,48;CL:0000234,6.66e-08,48;CL:0000860,1.27e-07,42;CL:0002057,1.27e-07,42;CL:0002320,2.20e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.48e-09!239;DOID:162!7.44e-09!235 | |||
|ontology_enrichment_disease_v019= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@NIPA2 | |||
}} |
Revision as of 06:22, 11 September 2013
Short description: | p1@NIPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NIPA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337451, ENST00000359727, ENST00000398013, ENST00000398014, ENST00000539711, ENST00000559571, ENST00000560039, ENST00000560205, ENST00000560762, ENST00000561072, NM_001008860, NM_001008892, NM_001008894, NM_001184888, NM_001184889, NM_030922, uc001yux.2, uc001yuy.2, uc001yuz.2, uc001yva.2, uc001yvb.2, uc010ayb.2_5end |
EntrezGene: | NIPA2 |
HGNC: | 17044 |
UniProt: | Q8N8Q9F8W7Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 5.21e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.21e-17 | 161 |
hematopoietic stem cell | 9.96e-17 | 168 |
hematopoietic cell | 1.14e-16 | 177 |
leukocyte | 4.07e-15 | 136 |
nongranular leukocyte | 1.01e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 6.82e-14 | 120 |
myeloid cell | 3.63e-11 | 108 |
common myeloid progenitor | 3.63e-11 | 108 |
stem cell | 4.90e-11 | 441 |
myeloid leukocyte | 6.18e-11 | 72 |
macrophage dendritic cell progenitor | 1.52e-10 | 61 |
lymphocyte of B lineage | 1.63e-10 | 24 |
pro-B cell | 1.63e-10 | 24 |
monopoietic cell | 2.16e-10 | 59 |
monocyte | 2.16e-10 | 59 |
monoblast | 2.16e-10 | 59 |
promonocyte | 2.16e-10 | 59 |
somatic stem cell | 2.49e-10 | 433 |
multi fate stem cell | 4.47e-10 | 427 |
motile cell | 5.81e-10 | 386 |
granulocyte monocyte progenitor cell | 1.26e-09 | 67 |
myeloid lineage restricted progenitor cell | 8.53e-09 | 66 |
B cell | 2.58e-08 | 14 |
mesenchymal cell | 6.35e-08 | 354 |
defensive cell | 6.66e-08 | 48 |
phagocyte | 6.66e-08 | 48 |
classical monocyte | 1.27e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-07 | 42 |
connective tissue cell | 2.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 9.24e-09 | 90 |
bone marrow | 1.11e-08 | 76 |
bone element | 1.35e-08 | 82 |
immune system | 3.71e-08 | 93 |
skeletal system | 3.29e-07 | 100 |
connective tissue | 3.88e-07 | 371 |
hemolymphoid system | 8.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.48e-09 | 239 |
cancer | 7.44e-09 | 235 |
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