FFCP PHASE1:Hg19::chr15:30113676..30113684,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7082|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11827|TSSclassifier=S|UniProt=G5E9E7|association_with_transcript=66bp_to_ENST00000400011,uc001zcq.2_5end|description=CAGE_peak_17_at_TJP1_5end|id=chr15:30113676..30113684,-|ontology_enrichment_celltype=CL:0000066!3.53e-12!254|ontology_enrichment_celltype_v019=CL:0000540;3.37e-10;6!CL:0000404;3.37e-10;6!CL:0000313;8.01e-08;1|ontology_enrichment_celltype_v019_2=CL:0000540,2.47e-10,6;CL:0000031,2.47e-10,6;CL:0000404,2.47e-10,6;CL:0000047,7.34e-08,8;CL:0000313,1.07e-07,1|ontology_enrichment_development_v019=CL:0000031;3.37e-10;6!UBERON:0005425;1.91e-07;1!UBERON:0001041;5.31e-07;30|ontology_enrichment_disease=DOID:305!4.39e-17!106;DOID:0050687!8.82e-14!143;DOID:1749!1.42e-09!14|ontology_enrichment_disease_v019=DOID:1749;6.87e-16;14!DOID:2152;8.01e-08;1!DOID:1324;7.68e-07;15|ontology_enrichment_disease_v019_2=DOID:1749,7.35e-16,14;DOID:305,8.77e-09,106;DOID:2152,1.07e-07,1;DOID:0050687,7.13e-07,143;DOID:1324,8.05e-07,15|ontology_enrichment_uberon=UBERON:0005157!5.44e-08!51;UBERON:0000344!1.20e-07!12;UBERON:0005153!2.14e-07!37;UBERON:0004111!4.50e-07!241|ontology_enrichment_uberon_v019=UBERON:0003343;6.71e-15;4!UBERON:0004785;6.71e-15;4!UBERON:0000974;4.20e-10;6!UBERON:0000997;8.01e-08;1!UBERON:0004911;8.01e-08;1!UBERON:0002171;8.01e-08;1!UBERON:0005056;8.01e-08;1!UBERON:0006518;8.01e-08;1!UBERON:0008949;8.01e-08;1!UBERON:0004176;8.01e-08;1!UBERON:0000101;8.01e-08;1!UBERON:0002167;8.01e-08;1!UBERON:0000941;1.91e-07;1!UBERON:0004913;1.91e-07;1!UBERON:0001785;1.91e-07;1!UBERON:0002464;1.91e-07;1!UBERON:0004904;1.91e-07;1!UBERON:0003703;1.91e-07;1!UBERON:0001021;1.91e-07;1!UBERON:0001174;1.91e-07;1!UBERON:0004914;1.91e-07;1!UBERON:0001052;3.22e-07;4!UBERON:0002394;4.90e-07;4!UBERON:0003928;4.90e-07;4!UBERON:0002048;5.67e-07;22!UBERON:0000117;5.67e-07;22!UBERON:0000171;5.67e-07;22!UBERON:0000170;5.67e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.52e-15,4;UBERON:0004785,8.52e-15,4;UBERON:0000997,8.28e-08,1;UBERON:0005056,8.28e-08,1;UBERON:0002171,1.01e-07,1;UBERON:0006518,1.01e-07,1;UBERON:0008949,1.01e-07,1;UBERON:0000101,1.01e-07,1;UBERON:0002167,1.01e-07,1;UBERON:0004911,1.07e-07,1;UBERON:0000941,2.04e-07,1;UBERON:0001785,2.04e-07,1;UBERON:0002464,2.04e-07,1;UBERON:0004904,2.04e-07,1;UBERON:0001021,2.04e-07,1;UBERON:0003902,2.04e-07,1;UBERON:0005425,2.04e-07,1;UBERON:0001052,2.80e-07,4;UBERON:0004913,3.17e-07,1;UBERON:0003703,3.17e-07,1;UBERON:0001174,3.17e-07,1;UBERON:0004914,3.17e-07,1;UBERON:0002048,6.18e-07,22;UBERON:0000117,6.18e-07,22;UBERON:0000171,6.18e-07,22;UBERON:0000170,6.18e-07,22;UBERON:0005597,6.18e-07,22;UBERON:0000118,6.18e-07,22;UBERON:0003100,8.08e-07,41|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,1.1240175325762,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0.283550194484773,2.95543124919399,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0.229628896329213,0,0,0,0.462092022626489,0,0,0.527758144464379,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.765676274967505,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,1.43789361835723,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0,6.35634125731916,1.41832609060762,0,0,0,1.77148277162768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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11827 | |||
|TSSclassifier=S | |||
|UniProt=G5E9E7 | |||
|association_with_transcript=66bp_to_ENST00000400011,uc001zcq.2_5end | |||
|description=CAGE_peak_17_at_TJP1_5end | |||
|id=chr15:30113676..30113684,- | |||
|ontology_enrichment_celltype=CL:0000066!3.53e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.37e-10;6!CL:0000404;3.37e-10;6!CL:0000313;8.01e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.47e-10,6;CL:0000031,2.47e-10,6;CL:0000404,2.47e-10,6;CL:0000047,7.34e-08,8;CL:0000313,1.07e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;3.37e-10;6!UBERON:0005425;1.91e-07;1!UBERON:0001041;5.31e-07;30 | |||
|ontology_enrichment_disease=DOID:305!4.39e-17!106;DOID:0050687!8.82e-14!143;DOID:1749!1.42e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.87e-16;14!DOID:2152;8.01e-08;1!DOID:1324;7.68e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.35e-16,14;DOID:305,8.77e-09,106;DOID:2152,1.07e-07,1;DOID:0050687,7.13e-07,143;DOID:1324,8.05e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0005157!5.44e-08!51;UBERON:0000344!1.20e-07!12;UBERON:0005153!2.14e-07!37;UBERON:0004111!4.50e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.71e-15;4!UBERON:0004785;6.71e-15;4!UBERON:0000974;4.20e-10;6!UBERON:0000997;8.01e-08;1!UBERON:0004911;8.01e-08;1!UBERON:0002171;8.01e-08;1!UBERON:0005056;8.01e-08;1!UBERON:0006518;8.01e-08;1!UBERON:0008949;8.01e-08;1!UBERON:0004176;8.01e-08;1!UBERON:0000101;8.01e-08;1!UBERON:0002167;8.01e-08;1!UBERON:0000941;1.91e-07;1!UBERON:0004913;1.91e-07;1!UBERON:0001785;1.91e-07;1!UBERON:0002464;1.91e-07;1!UBERON:0004904;1.91e-07;1!UBERON:0003703;1.91e-07;1!UBERON:0001021;1.91e-07;1!UBERON:0001174;1.91e-07;1!UBERON:0004914;1.91e-07;1!UBERON:0001052;3.22e-07;4!UBERON:0002394;4.90e-07;4!UBERON:0003928;4.90e-07;4!UBERON:0002048;5.67e-07;22!UBERON:0000117;5.67e-07;22!UBERON:0000171;5.67e-07;22!UBERON:0000170;5.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.52e-15,4;UBERON:0004785,8.52e-15,4;UBERON:0000997,8.28e-08,1;UBERON:0005056,8.28e-08,1;UBERON:0002171,1.01e-07,1;UBERON:0006518,1.01e-07,1;UBERON:0008949,1.01e-07,1;UBERON:0000101,1.01e-07,1;UBERON:0002167,1.01e-07,1;UBERON:0004911,1.07e-07,1;UBERON:0000941,2.04e-07,1;UBERON:0001785,2.04e-07,1;UBERON:0002464,2.04e-07,1;UBERON:0004904,2.04e-07,1;UBERON:0001021,2.04e-07,1;UBERON:0003902,2.04e-07,1;UBERON:0005425,2.04e-07,1;UBERON:0001052,2.80e-07,4;UBERON:0004913,3.17e-07,1;UBERON:0003703,3.17e-07,1;UBERON:0001174,3.17e-07,1;UBERON:0004914,3.17e-07,1;UBERON:0002048,6.18e-07,22;UBERON:0000117,6.18e-07,22;UBERON:0000171,6.18e-07,22;UBERON:0000170,6.18e-07,22;UBERON:0005597,6.18e-07,22;UBERON:0000118,6.18e-07,22;UBERON:0003100,8.08e-07,41 | |||
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|short_description=p17@TJP1 | |||
}} |
Revision as of 06:31, 11 September 2013
Short description: | p17@TJP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_TJP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_ENST00000400011, uc001zcq.2_5end |
EntrezGene: | TJP1 |
HGNC: | 11827 |
UniProt: | G5E9E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.47e-10 | 6 |
neuroblast | 2.47e-10 | 6 |
electrically signaling cell | 2.47e-10 | 6 |
neuronal stem cell | 7.34e-08 | 8 |
serous secreting cell | 1.07e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.52e-15 | 4 |
respiratory system mucosa | 8.52e-15 | 4 |
mammalian vulva | 8.28e-08 | 1 |
external female genitalia | 8.28e-08 | 1 |
lower lobe of right lung | 1.01e-07 | 1 |
right lung lobe | 1.01e-07 | 1 |
lower lobe of lung | 1.01e-07 | 1 |
lobe of lung | 1.01e-07 | 1 |
right lung | 1.01e-07 | 1 |
epithelium of female gonad | 1.07e-07 | 1 |
cranial nerve II | 2.04e-07 | 1 |
cranial nerve | 2.04e-07 | 1 |
nerve trunk | 2.04e-07 | 1 |
nerve connecting eye with brain | 2.04e-07 | 1 |
nerve | 2.04e-07 | 1 |
retinal neural layer | 2.04e-07 | 1 |
presumptive neural retina | 2.04e-07 | 1 |
rectum | 2.80e-07 | 4 |
hepatopancreatic ampulla | 3.17e-07 | 1 |
extrahepatic bile duct | 3.17e-07 | 1 |
common bile duct | 3.17e-07 | 1 |
duodenal papilla | 3.17e-07 | 1 |
lung | 6.18e-07 | 22 |
respiratory tube | 6.18e-07 | 22 |
respiration organ | 6.18e-07 | 22 |
pair of lungs | 6.18e-07 | 22 |
lung primordium | 6.18e-07 | 22 |
lung bud | 6.18e-07 | 22 |
female organism | 8.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.35e-16 | 14 |
carcinoma | 8.77e-09 | 106 |
ovary epithelial cancer | 1.07e-07 | 1 |
cell type cancer | 7.13e-07 | 143 |
lung cancer | 8.05e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.