FFCP PHASE1:Hg19::chr15:33025921..33025938,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C453|description=CAGE_peak_at_chr15:33025921..33025938,+|id=chr15:33025921..33025938,+|ontology_enrichment_celltype=CL:0000055!1.79e-10!180;CL:0000057!2.25e-10!75;CL:0002579!1.35e-09!3;CL:0000197!7.79e-09!6;CL:0000098!7.79e-09!6;CL:0002167!7.79e-09!6;CL:0002334!7.28e-08!12|ontology_enrichment_celltype_v019=CL:0002552;2.59e-12;5!CL:0000197;2.04e-10;6!CL:0000098;2.04e-10;6!CL:0002167;2.04e-10;6!CL:0002556;2.64e-10;6|ontology_enrichment_celltype_v019_2=CL:0002552,2.99e-12,5;CL:0000197,2.19e-10,6;CL:0000098,2.19e-10,6;CL:0002167,2.19e-10,6;CL:0002556,2.52e-10,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3307!1.34e-07!2|ontology_enrichment_disease_v019=DOID:3307;6.99e-29;2!DOID:1192;3.32e-20;3!DOID:3571;5.56e-16;1!DOID:3369;6.93e-16;1!DOID:4235;6.93e-16;1!DOID:2513;2.38e-15;1!DOID:3350;1.20e-08;2!DOID:3193;1.67e-08;2!DOID:962;1.67e-08;2!DOID:3451;2.48e-08;2!DOID:4159;2.48e-08;2!DOID:0060122;2.48e-08;2|ontology_enrichment_disease_v019_2=DOID:3307,3.94e-29,2;DOID:1192,3.01e-20,3;DOID:3571,5.56e-16,1;DOID:3369,6.44e-16,1;DOID:4235,7.46e-16,1;DOID:2513,2.38e-15,1;DOID:3350,1.20e-08,2;DOID:3193,1.61e-08,2;DOID:962,1.61e-08,2;DOID:3451,2.48e-08,2;DOID:4159,2.48e-08,2;DOID:0060122,2.48e-08,2|ontology_enrichment_uberon=UBERON:0004457!3.10e-08!12;UBERON:0000042!3.10e-08!12;UBERON:0003688!4.29e-08!6;UBERON:0002358!4.29e-08!6;UBERON:0003684!4.29e-08!6;UBERON:0001178!4.29e-08!6|ontology_enrichment_uberon_v019=UBERON:0007195;1.07e-15;1!UBERON:0001758;2.64e-10;6!UBERON:0003672;2.64e-10;6!UBERON:0003129;5.82e-09;7!UBERON:0000165;2.45e-08;28!UBERON:0001828;4.91e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.34e-15,1;UBERON:0001758,2.52e-10,6;UBERON:0003672,2.52e-10,6;UBERON:0003129,5.59e-09,7;UBERON:0000165,4.80e-08,29;UBERON:0000930,4.80e-08,29;UBERON:0001828,5.37e-08,8|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.47266929278557,0,0,0,0,0,0.877955241761676,1.22595118319608,1.65261864797256,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,1.07057393278297,2.99634588564476,0.937131319941706,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.965123526861645,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,1.55519793830904,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,8.28689732147528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.797525143673985,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,4.24817786719542,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0|short_description=p@chr15:33025921..33025938,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:33025921..33025938,+ | |||
|id=chr15:33025921..33025938,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.79e-10!180;CL:0000057!2.25e-10!75;CL:0002579!1.35e-09!3;CL:0000197!7.79e-09!6;CL:0000098!7.79e-09!6;CL:0002167!7.79e-09!6;CL:0002334!7.28e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002552;2.59e-12;5!CL:0000197;2.04e-10;6!CL:0000098;2.04e-10;6!CL:0002167;2.04e-10;6!CL:0002556;2.64e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.99e-12,5;CL:0000197,2.19e-10,6;CL:0000098,2.19e-10,6;CL:0002167,2.19e-10,6;CL:0002556,2.52e-10,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3307!1.34e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;6.99e-29;2!DOID:1192;3.32e-20;3!DOID:3571;5.56e-16;1!DOID:3369;6.93e-16;1!DOID:4235;6.93e-16;1!DOID:2513;2.38e-15;1!DOID:3350;1.20e-08;2!DOID:3193;1.67e-08;2!DOID:962;1.67e-08;2!DOID:3451;2.48e-08;2!DOID:4159;2.48e-08;2!DOID:0060122;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.94e-29,2;DOID:1192,3.01e-20,3;DOID:3571,5.56e-16,1;DOID:3369,6.44e-16,1;DOID:4235,7.46e-16,1;DOID:2513,2.38e-15,1;DOID:3350,1.20e-08,2;DOID:3193,1.61e-08,2;DOID:962,1.61e-08,2;DOID:3451,2.48e-08,2;DOID:4159,2.48e-08,2;DOID:0060122,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004457!3.10e-08!12;UBERON:0000042!3.10e-08!12;UBERON:0003688!4.29e-08!6;UBERON:0002358!4.29e-08!6;UBERON:0003684!4.29e-08!6;UBERON:0001178!4.29e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.07e-15;1!UBERON:0001758;2.64e-10;6!UBERON:0003672;2.64e-10;6!UBERON:0003129;5.82e-09;7!UBERON:0000165;2.45e-08;28!UBERON:0001828;4.91e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.34e-15,1;UBERON:0001758,2.52e-10,6;UBERON:0003672,2.52e-10,6;UBERON:0003129,5.59e-09,7;UBERON:0000165,4.80e-08,29;UBERON:0000930,4.80e-08,29;UBERON:0001828,5.37e-08,8 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.47266929278557,0,0,0,0,0,0.877955241761676,1.22595118319608,1.65261864797256,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,1.07057393278297,2.99634588564476,0.937131319941706,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.965123526861645,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,1.55519793830904,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,8.28689732147528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.797525143673985,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,4.24817786719542,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:33025921..33025938,+ | |||
}} |
Revision as of 06:36, 11 September 2013
Short description: | p@chr15:33025921..33025938, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:33025921..33025938, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.99e-12 | 5 |
receptor cell | 2.19e-10 | 6 |
sensory epithelial cell | 2.19e-10 | 6 |
olfactory epithelial cell | 2.19e-10 | 6 |
fibroblast of periodontium | 2.52e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.34e-15 | 1 |
periodontium | 2.52e-10 | 6 |
dentition | 2.52e-10 | 6 |
skull | 5.59e-09 | 7 |
mouth | 4.80e-08 | 29 |
stomodeum | 4.80e-08 | 29 |
gingiva | 5.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.94e-29 | 2 |
peripheral nervous system neoplasm | 3.01e-20 | 3 |
liver cancer | 5.56e-16 | 1 |
peripheral primitive neuroectodermal tumor | 6.44e-16 | 1 |
spindle cell sarcoma | 7.46e-16 | 1 |
basal cell carcinoma | 2.38e-15 | 1 |
mesenchymal cell neoplasm | 1.20e-08 | 2 |
peripheral nerve sheath neoplasm | 1.61e-08 | 2 |
neurofibroma | 1.61e-08 | 2 |
skin carcinoma | 2.48e-08 | 2 |
skin cancer | 2.48e-08 | 2 |
integumentary system cancer | 2.48e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.