FFCP PHASE1:Hg19::chr16:26803812..26803814,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:26803812..26803814,+|id=chr16:26803812..26803814,+|ontology_enrichment_celltype=CL:0002057!3.11e-26!42;CL:0000860!1.03e-23!45;CL:0000557!1.63e-21!71;CL:0000839!3.12e-19!70;CL:0002009!8.45e-19!65;CL:0000766!5.60e-18!76;CL:0002194!4.90e-17!63;CL:0000576!4.90e-17!63;CL:0000040!4.90e-17!63;CL:0000559!4.90e-17!63;CL:0000763!1.69e-10!112;CL:0000049!1.69e-10!112;CL:0002031!1.14e-08!124;CL:0000738!5.59e-07!140|ontology_enrichment_celltype_v019=CL:0000860;3.02e-29;33!CL:0002057;3.02e-29;33!CL:0000473;2.42e-23;39!CL:0000234;2.42e-23;39!CL:0000197;2.19e-15;6!CL:0000098;2.19e-15;6!CL:0002167;2.19e-15;6!CL:0000576;1.45e-12;48!CL:0000766;1.54e-12;69!CL:0000075;3.25e-07;27!CL:0000306;5.22e-07;4!CL:0002222;5.22e-07;4!CL:0002224;5.22e-07;4|ontology_enrichment_celltype_v019_2=CL:0000860,8.10e-24,42;CL:0002057,8.10e-24,42;CL:0000473,1.26e-23,48;CL:0000234,1.26e-23,48;CL:0000557,1.32e-23,67;CL:0000766,1.21e-21,72;CL:0000839,3.43e-21,66;CL:0002009,3.03e-20,61;CL:0002194,2.82e-18,59;CL:0000576,2.82e-18,59;CL:0000040,2.82e-18,59;CL:0000559,2.82e-18,59;CL:0000197,8.49e-16,6;CL:0000098,8.49e-16,6;CL:0002167,8.49e-16,6;CL:0000763,5.46e-15,108;CL:0000049,5.46e-15,108;CL:0002031,1.37e-11,120;CL:0000738,4.17e-11,136;CL:0002032,8.77e-09,161;CL:0000837,8.77e-09,161;CL:0000037,2.94e-08,168;CL:0002087,5.58e-08,115;CL:0000988,1.21e-07,177;CL:0000075,2.38e-07,27;CL:0000306,5.00e-07,4;CL:0002222,5.00e-07,4;CL:0002224,5.00e-07,4|ontology_enrichment_development_v019=CL:0002057;6.46e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.13e-21!80;UBERON:0001474!9.58e-19!86;UBERON:0004765!1.88e-16!101;UBERON:0001434!1.88e-16!101;UBERON:0002390!4.15e-15!102;UBERON:0003061!4.15e-15!102;UBERON:0002193!5.32e-15!112;UBERON:0002405!1.60e-13!115;UBERON:0002204!1.30e-10!167;UBERON:0003081!4.48e-10!216|ontology_enrichment_uberon_v019=UBERON:0010077;5.22e-07;4!UBERON:0005389;5.22e-07;4!UBERON:0000484;5.22e-07;4!UBERON:0000965;5.22e-07;4!UBERON:0001803;5.22e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-23,76;UBERON:0001474,6.05e-21,82;UBERON:0004765,9.56e-19,90;UBERON:0002405,5.11e-18,93;UBERON:0002390,6.66e-17,98;UBERON:0003061,6.66e-17,98;UBERON:0001434,1.73e-16,100;UBERON:0002193,5.56e-15,108;UBERON:0002204,1.41e-10,167;UBERON:0003081,6.21e-08,203;UBERON:0010077,5.00e-07,4;UBERON:0005389,5.00e-07,4;UBERON:0000484,5.00e-07,4;UBERON:0002546,5.00e-07,4;UBERON:0000965,5.00e-07,4;UBERON:0001803,5.00e-07,4;UBERON:0003073,5.00e-07,4;UBERON:0005426,5.00e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0.293600439334847,0,0,0.651032612147555,0,0,0,1.16318591023652,1.88937971844405,0.970336244751265,0.232429036905685,1.23350366406548,0.619412741790207,2.3015391385772,2.0492856522328,0,0.689491361473237,2.5819387343353,2.70852973188684,2.44715041405386,0.545812300115692,0.674170453335254,1.83650335422542,0,1.27867425159808,0.329851300186716,0.598390972864896,0,0.870627715885752,2.26954089876456,1.86846674698672,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0.368277635987565,1.58231193720442,0,0,0.209658645508376,0.22465726229299,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.936480230490962,0,0.448346041655403,0,0,0,0.408308342509787,0.368502951935304,0.516628905878827,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,5.23206629947925,0,0.252433774244115,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,5.68058984377876,2.46558257895225,0,0.462985512576611,0.190254152234598,0,0,0,0,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.880484340132261,3.52457796419313,0.288239906833923,2.77733353538036,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,1.96271887676878,2.8386434706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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:26803812..26803814,+ | |||
|id=chr16:26803812..26803814,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.11e-26!42;CL:0000860!1.03e-23!45;CL:0000557!1.63e-21!71;CL:0000839!3.12e-19!70;CL:0002009!8.45e-19!65;CL:0000766!5.60e-18!76;CL:0002194!4.90e-17!63;CL:0000576!4.90e-17!63;CL:0000040!4.90e-17!63;CL:0000559!4.90e-17!63;CL:0000763!1.69e-10!112;CL:0000049!1.69e-10!112;CL:0002031!1.14e-08!124;CL:0000738!5.59e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-29;33!CL:0002057;3.02e-29;33!CL:0000473;2.42e-23;39!CL:0000234;2.42e-23;39!CL:0000197;2.19e-15;6!CL:0000098;2.19e-15;6!CL:0002167;2.19e-15;6!CL:0000576;1.45e-12;48!CL:0000766;1.54e-12;69!CL:0000075;3.25e-07;27!CL:0000306;5.22e-07;4!CL:0002222;5.22e-07;4!CL:0002224;5.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.10e-24,42;CL:0002057,8.10e-24,42;CL:0000473,1.26e-23,48;CL:0000234,1.26e-23,48;CL:0000557,1.32e-23,67;CL:0000766,1.21e-21,72;CL:0000839,3.43e-21,66;CL:0002009,3.03e-20,61;CL:0002194,2.82e-18,59;CL:0000576,2.82e-18,59;CL:0000040,2.82e-18,59;CL:0000559,2.82e-18,59;CL:0000197,8.49e-16,6;CL:0000098,8.49e-16,6;CL:0002167,8.49e-16,6;CL:0000763,5.46e-15,108;CL:0000049,5.46e-15,108;CL:0002031,1.37e-11,120;CL:0000738,4.17e-11,136;CL:0002032,8.77e-09,161;CL:0000837,8.77e-09,161;CL:0000037,2.94e-08,168;CL:0002087,5.58e-08,115;CL:0000988,1.21e-07,177;CL:0000075,2.38e-07,27;CL:0000306,5.00e-07,4;CL:0002222,5.00e-07,4;CL:0002224,5.00e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.13e-21!80;UBERON:0001474!9.58e-19!86;UBERON:0004765!1.88e-16!101;UBERON:0001434!1.88e-16!101;UBERON:0002390!4.15e-15!102;UBERON:0003061!4.15e-15!102;UBERON:0002193!5.32e-15!112;UBERON:0002405!1.60e-13!115;UBERON:0002204!1.30e-10!167;UBERON:0003081!4.48e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;5.22e-07;4!UBERON:0005389;5.22e-07;4!UBERON:0000484;5.22e-07;4!UBERON:0000965;5.22e-07;4!UBERON:0001803;5.22e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-23,76;UBERON:0001474,6.05e-21,82;UBERON:0004765,9.56e-19,90;UBERON:0002405,5.11e-18,93;UBERON:0002390,6.66e-17,98;UBERON:0003061,6.66e-17,98;UBERON:0001434,1.73e-16,100;UBERON:0002193,5.56e-15,108;UBERON:0002204,1.41e-10,167;UBERON:0003081,6.21e-08,203;UBERON:0010077,5.00e-07,4;UBERON:0005389,5.00e-07,4;UBERON:0000484,5.00e-07,4;UBERON:0002546,5.00e-07,4;UBERON:0000965,5.00e-07,4;UBERON:0001803,5.00e-07,4;UBERON:0003073,5.00e-07,4;UBERON:0005426,5.00e-07,4 | |||
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|short_description=p@chr16:26803812..26803814,+ | |||
}} |
Revision as of 09:49, 11 September 2013
Short description: | p@chr16:26803812..26803814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:26803812..26803814, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.10e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.10e-24 | 42 |
defensive cell | 1.26e-23 | 48 |
phagocyte | 1.26e-23 | 48 |
granulocyte monocyte progenitor cell | 1.32e-23 | 67 |
myeloid leukocyte | 1.21e-21 | 72 |
myeloid lineage restricted progenitor cell | 3.43e-21 | 66 |
macrophage dendritic cell progenitor | 3.03e-20 | 61 |
monopoietic cell | 2.82e-18 | 59 |
monocyte | 2.82e-18 | 59 |
monoblast | 2.82e-18 | 59 |
promonocyte | 2.82e-18 | 59 |
receptor cell | 8.49e-16 | 6 |
sensory epithelial cell | 8.49e-16 | 6 |
olfactory epithelial cell | 8.49e-16 | 6 |
myeloid cell | 5.46e-15 | 108 |
common myeloid progenitor | 5.46e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 1.37e-11 | 120 |
leukocyte | 4.17e-11 | 136 |
hematopoietic oligopotent progenitor cell | 8.77e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.77e-09 | 161 |
hematopoietic stem cell | 2.94e-08 | 168 |
nongranular leukocyte | 5.58e-08 | 115 |
hematopoietic cell | 1.21e-07 | 177 |
columnar/cuboidal epithelial cell | 2.38e-07 | 27 |
crystallin accumulating cell | 5.00e-07 | 4 |
vertebrate lens cell | 5.00e-07 | 4 |
lens epithelial cell | 5.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.80e-23 | 76 |
bone element | 6.05e-21 | 82 |
skeletal element | 9.56e-19 | 90 |
immune system | 5.11e-18 | 93 |
hematopoietic system | 6.66e-17 | 98 |
blood island | 6.66e-17 | 98 |
skeletal system | 1.73e-16 | 100 |
hemolymphoid system | 5.56e-15 | 108 |
musculoskeletal system | 1.41e-10 | 167 |
lateral plate mesoderm | 6.21e-08 | 203 |
cuboidal epithelium | 5.00e-07 | 4 |
transparent eye structure | 5.00e-07 | 4 |
simple cuboidal epithelium | 5.00e-07 | 4 |
cranial placode | 5.00e-07 | 4 |
lens of camera-type eye | 5.00e-07 | 4 |
epithelium of lens | 5.00e-07 | 4 |
lens placode | 5.00e-07 | 4 |
lens vesicle | 5.00e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.