FFCP PHASE1:Hg19::chr17:40441354..40441410,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11366|TSSclassifier=S|UniProt=|association_with_transcript=123bp_to_ENST00000478897_5end|coexpression_cluster_id=C93|description=CAGE_peak_2_at_STAT5A_5end|id=chr17:40441354..40441410,+|ontology_enrichment_celltype=CL:0000988!3.87e-33!182;CL:0002032!2.07e-32!165;CL:0000837!2.07e-32!165;CL:0000037!2.16e-32!172;CL:0000566!2.16e-32!172;CL:0000763!2.10e-21!112;CL:0000049!2.10e-21!112;CL:0000738!1.57e-17!140;CL:0002031!1.00e-15!124;CL:0002087!7.09e-12!119;CL:0000838!1.82e-10!52;CL:0000542!3.88e-10!53;CL:0000051!3.88e-10!53;CL:0000990!1.87e-09!8;CL:0000084!2.35e-09!25;CL:0000827!2.35e-09!25;CL:0000791!2.07e-08!18;CL:0000789!2.07e-08!18;CL:0002420!2.07e-08!18;CL:0002419!2.07e-08!18;CL:0000790!2.07e-08!18;CL:0000453!1.23e-07!5;CL:0000134!2.01e-07!358;CL:0000451!2.02e-07!10;CL:0002320!6.51e-07!365|ontology_enrichment_celltype_v019=CL:0000775;2.98e-13;3!CL:0000763;6.81e-11;100!CL:0000988;2.62e-08;177|ontology_enrichment_celltype_v019_2=CL:0000988,2.77e-27,177;CL:0000763,2.99e-25,108;CL:0000049,2.99e-25,108;CL:0002032,3.51e-25,161;CL:0000837,3.51e-25,161;CL:0000037,8.49e-24,168;CL:0000775,2.74e-13,3;CL:0000134,1.72e-08,354;CL:0002320,3.63e-08,361;CL:0000219,4.98e-07,386;CL:0000034,5.14e-07,441|ontology_enrichment_development_v019=CL:0000049;6.54e-08;108|ontology_enrichment_disease=DOID:8692!7.46e-12!31;DOID:1036!2.70e-10!8;DOID:2531!4.75e-10!51;DOID:0060083!4.75e-10!51;DOID:1240!1.30e-09!39|ontology_enrichment_disease_v019=DOID:8692;4.33e-28;31!DOID:1036;1.05e-19;8!DOID:1240;2.23e-19;39!DOID:2531;8.04e-15;51!DOID:0060083;8.04e-15;51|ontology_enrichment_disease_v019_2=DOID:8692,2.51e-28,31;DOID:1240,5.74e-25,39;DOID:2531,2.49e-23,51;DOID:0060083,2.49e-23,51;DOID:1036,9.91e-20,8|ontology_enrichment_uberon=UBERON:0002390!2.13e-14!102;UBERON:0003061!2.13e-14!102;UBERON:0002193!8.77e-13!112;UBERON:0000178!6.57e-09!15;UBERON:0000179!6.57e-09!15;UBERON:0000463!6.57e-09!15;UBERON:0004177!7.20e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-09;15!UBERON:0000179;1.31e-09;15!UBERON:0000463;1.31e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-09,15;UBERON:0000179,1.48e-09,15;UBERON:0000463,1.48e-09,15;UBERON:0002384,1.00e-07,371;UBERON:0002390,9.18e-07,98;UBERON:0003061,9.18e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,1.06730766284929,0.629686250509434,0.393364276848904,0,0,0,0,0,0,0,0.587200878669695,0,0,0.434021741431704,0,0,0,0,0.377875943688809,0,0.697287110717054,0,0,0,0,0,0,1.29096936716765,0,0.188242339542605,0,0.449446968890169,0,0,1.27867425159808,0,0.199463657621632,0,1.16083695451434,0.56738522469114,1.24564449799115,0,0,0,1.21079900526674,1.10483290796269,0.632924774881769,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,3.36305137788922,9.74521113667785,0.590129310341499,0.786021525498329,0.616804496998528,0.167186495390678,0,0,1.94826728407911,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.766440987203842,0.68725489096526,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,1.50939302401662,0.128343036279748,0.254094624222463,0,0,0,0,3.74503511973591,5.9832291840805,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.3071772551245,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,1.58625035258854,0,0,0,0,0,0,0,9.18065108590956,0.5745161103971,1.69338866179106,1.62310970137278,0,0,0,0,28.4410186706694,0,0,0,0,0,0,0,0,38.4200519975434,36.9262196843137,21.3659985996027,0,36.6566213228409,0.561421621224659,0.586032717087576,0,0,0,0,0,0,0,0,0,1.81284261649436,0,0,0.552567831062295,0,0,2.58478091468246,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,17.6184382814166,146.41158374055,132.342210664474,115.964716600307,77.4195229514675,9.8540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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11366 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=123bp_to_ENST00000478897_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_2_at_STAT5A_5end | |||
|id=chr17:40441354..40441410,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.87e-33!182;CL:0002032!2.07e-32!165;CL:0000837!2.07e-32!165;CL:0000037!2.16e-32!172;CL:0000566!2.16e-32!172;CL:0000763!2.10e-21!112;CL:0000049!2.10e-21!112;CL:0000738!1.57e-17!140;CL:0002031!1.00e-15!124;CL:0002087!7.09e-12!119;CL:0000838!1.82e-10!52;CL:0000542!3.88e-10!53;CL:0000051!3.88e-10!53;CL:0000990!1.87e-09!8;CL:0000084!2.35e-09!25;CL:0000827!2.35e-09!25;CL:0000791!2.07e-08!18;CL:0000789!2.07e-08!18;CL:0002420!2.07e-08!18;CL:0002419!2.07e-08!18;CL:0000790!2.07e-08!18;CL:0000453!1.23e-07!5;CL:0000134!2.01e-07!358;CL:0000451!2.02e-07!10;CL:0002320!6.51e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.98e-13;3!CL:0000763;6.81e-11;100!CL:0000988;2.62e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.77e-27,177;CL:0000763,2.99e-25,108;CL:0000049,2.99e-25,108;CL:0002032,3.51e-25,161;CL:0000837,3.51e-25,161;CL:0000037,8.49e-24,168;CL:0000775,2.74e-13,3;CL:0000134,1.72e-08,354;CL:0002320,3.63e-08,361;CL:0000219,4.98e-07,386;CL:0000034,5.14e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000049;6.54e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!7.46e-12!31;DOID:1036!2.70e-10!8;DOID:2531!4.75e-10!51;DOID:0060083!4.75e-10!51;DOID:1240!1.30e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.33e-28;31!DOID:1036;1.05e-19;8!DOID:1240;2.23e-19;39!DOID:2531;8.04e-15;51!DOID:0060083;8.04e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.51e-28,31;DOID:1240,5.74e-25,39;DOID:2531,2.49e-23,51;DOID:0060083,2.49e-23,51;DOID:1036,9.91e-20,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-14!102;UBERON:0003061!2.13e-14!102;UBERON:0002193!8.77e-13!112;UBERON:0000178!6.57e-09!15;UBERON:0000179!6.57e-09!15;UBERON:0000463!6.57e-09!15;UBERON:0004177!7.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-09;15!UBERON:0000179;1.31e-09;15!UBERON:0000463;1.31e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-09,15;UBERON:0000179,1.48e-09,15;UBERON:0000463,1.48e-09,15;UBERON:0002384,1.00e-07,371;UBERON:0002390,9.18e-07,98;UBERON:0003061,9.18e-07,98 | |||
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|short_description=p2@STAT5A | |||
}} |
Revision as of 13:42, 11 September 2013
Short description: | p2@STAT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STAT5A_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 123bp_to_ENST00000478897_5end |
EntrezGene: | STAT5A |
HGNC: | 11366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.77e-27 | 177 |
myeloid cell | 2.99e-25 | 108 |
common myeloid progenitor | 2.99e-25 | 108 |
hematopoietic oligopotent progenitor cell | 3.51e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-25 | 161 |
hematopoietic stem cell | 8.49e-24 | 168 |
neutrophil | 2.74e-13 | 3 |
mesenchymal cell | 1.72e-08 | 354 |
connective tissue cell | 3.63e-08 | 361 |
motile cell | 4.98e-07 | 386 |
stem cell | 5.14e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
blood | 1.48e-09 | 15 |
haemolymphatic fluid | 1.48e-09 | 15 |
organism substance | 1.48e-09 | 15 |
connective tissue | 1.00e-07 | 371 |
hematopoietic system | 9.18e-07 | 98 |
blood island | 9.18e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.51e-28 | 31 |
leukemia | 5.74e-25 | 39 |
hematologic cancer | 2.49e-23 | 51 |
immune system cancer | 2.49e-23 | 51 |
chronic leukemia | 9.91e-20 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.