FFCP PHASE1:Hg19::chr18:61564319..61564370,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5055|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8584|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc002ljp.1,uc002ljq.1_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_SERPINB2_5end|id=chr18:61564319..61564370,+|ontology_enrichment_celltype=CL:0002057!3.08e-34!42;CL:0000860!3.16e-31!45;CL:0002009!1.44e-25!65;CL:0002194!5.81e-25!63;CL:0000576!5.81e-25!63;CL:0000040!5.81e-25!63;CL:0000559!5.81e-25!63;CL:0000557!1.92e-22!71;CL:0000839!2.33e-21!70;CL:0000766!4.33e-20!76;CL:0000763!1.35e-13!112;CL:0000049!1.35e-13!112;CL:0002087!1.19e-09!119;CL:0002031!5.62e-09!124;CL:0000738!5.41e-08!140|ontology_enrichment_celltype_v019=CL:0000860;1.10e-64;33!CL:0002057;1.10e-64;33!CL:0000473;2.61e-49;39!CL:0000234;2.61e-49;39!CL:0000576;2.15e-32;48!CL:0000766;7.31e-19;69!CL:0000763;1.94e-11;100!CL:0002087;1.19e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-66,42;CL:0002057,3.83e-66,42;CL:0000473,5.47e-62,48;CL:0000234,5.47e-62,48;CL:0002009,2.06e-50,61;CL:0002194,2.22e-48,59;CL:0000576,2.22e-48,59;CL:0000040,2.22e-48,59;CL:0000559,2.22e-48,59;CL:0000557,2.05e-45,67;CL:0000839,1.08e-42,66;CL:0000766,1.10e-38,72;CL:0000763,5.51e-26,108;CL:0000049,5.51e-26,108;CL:0002031,8.61e-23,120;CL:0002087,4.20e-22,115;CL:0000738,2.09e-19,136;CL:0002032,1.85e-15,161;CL:0000837,1.85e-15,161;CL:0000037,1.45e-14,168;CL:0000988,1.61e-13,177;CL:0000134,2.90e-08,354;CL:0002320,5.79e-08,361;CL:0000723,2.56e-07,433;CL:0000034,4.81e-07,441;CL:0000219,6.56e-07,386;CL:0000048,7.33e-07,427|ontology_enrichment_development_v019=CL:0002057;5.18e-48;42!CL:0000049;1.63e-07;108|ontology_enrichment_disease=DOID:2394!7.56e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.18e-18!80;UBERON:0001474!9.26e-18!86;UBERON:0004765!1.74e-13!101;UBERON:0001434!1.74e-13!101;UBERON:0002390!3.69e-13!102;UBERON:0003061!3.69e-13!102;UBERON:0002405!5.96e-12!115;UBERON:0002193!8.85e-12!112;UBERON:0002204!2.26e-10!167;UBERON:0003081!3.77e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.24e-39,76;UBERON:0001474,4.44e-36,82;UBERON:0004765,2.33e-32,90;UBERON:0002405,3.98e-31,93;UBERON:0002390,3.07e-29,98;UBERON:0003061,3.07e-29,98;UBERON:0001434,1.54e-28,100;UBERON:0002193,5.51e-26,108;UBERON:0002204,2.10e-17,167;UBERON:0003081,1.21e-15,203;UBERON:0000926,1.06e-07,315;UBERON:0004120,1.06e-07,315;UBERON:0006603,1.06e-07,315;UBERON:0002384,1.48e-07,371|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,1.10799081706375,1.00272223735071,0,0,0.32389366601898,0.257575567634187,0.436194716338694,0,0,2.55671940596253,0.822335776043652,0.309706370895104,16.6861587546847,2.30544635876191,4.25668013799453,35.1640594351351,9.68227025375739,5.41705946377367,2.07066573496865,0.545812300115692,0.224723484445085,21.4258724659632,6.41858054152187,23.6554736545645,4.94776950280074,1.79517291859469,2.13112375266347,11.8985787837719,13.0498601678962,18.6846674698673,7.5374599577023,4.69334626578181,1.52032191293582,15.7403870684676,5.15588690382591,7.91155968602211,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,1.72131935057184,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,1.00528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01439377059586,1.74306691720059,1.69954085009497,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,1.55776328755086,0.232420756919918,0,0,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,4.53614521001611,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,5.59871257791253,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8584 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002ljp.1,uc002ljq.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SERPINB2_5end | |||
|id=chr18:61564319..61564370,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.08e-34!42;CL:0000860!3.16e-31!45;CL:0002009!1.44e-25!65;CL:0002194!5.81e-25!63;CL:0000576!5.81e-25!63;CL:0000040!5.81e-25!63;CL:0000559!5.81e-25!63;CL:0000557!1.92e-22!71;CL:0000839!2.33e-21!70;CL:0000766!4.33e-20!76;CL:0000763!1.35e-13!112;CL:0000049!1.35e-13!112;CL:0002087!1.19e-09!119;CL:0002031!5.62e-09!124;CL:0000738!5.41e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-64;33!CL:0002057;1.10e-64;33!CL:0000473;2.61e-49;39!CL:0000234;2.61e-49;39!CL:0000576;2.15e-32;48!CL:0000766;7.31e-19;69!CL:0000763;1.94e-11;100!CL:0002087;1.19e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-66,42;CL:0002057,3.83e-66,42;CL:0000473,5.47e-62,48;CL:0000234,5.47e-62,48;CL:0002009,2.06e-50,61;CL:0002194,2.22e-48,59;CL:0000576,2.22e-48,59;CL:0000040,2.22e-48,59;CL:0000559,2.22e-48,59;CL:0000557,2.05e-45,67;CL:0000839,1.08e-42,66;CL:0000766,1.10e-38,72;CL:0000763,5.51e-26,108;CL:0000049,5.51e-26,108;CL:0002031,8.61e-23,120;CL:0002087,4.20e-22,115;CL:0000738,2.09e-19,136;CL:0002032,1.85e-15,161;CL:0000837,1.85e-15,161;CL:0000037,1.45e-14,168;CL:0000988,1.61e-13,177;CL:0000134,2.90e-08,354;CL:0002320,5.79e-08,361;CL:0000723,2.56e-07,433;CL:0000034,4.81e-07,441;CL:0000219,6.56e-07,386;CL:0000048,7.33e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-48;42!CL:0000049;1.63e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!7.56e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-18!80;UBERON:0001474!9.26e-18!86;UBERON:0004765!1.74e-13!101;UBERON:0001434!1.74e-13!101;UBERON:0002390!3.69e-13!102;UBERON:0003061!3.69e-13!102;UBERON:0002405!5.96e-12!115;UBERON:0002193!8.85e-12!112;UBERON:0002204!2.26e-10!167;UBERON:0003081!3.77e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.24e-39,76;UBERON:0001474,4.44e-36,82;UBERON:0004765,2.33e-32,90;UBERON:0002405,3.98e-31,93;UBERON:0002390,3.07e-29,98;UBERON:0003061,3.07e-29,98;UBERON:0001434,1.54e-28,100;UBERON:0002193,5.51e-26,108;UBERON:0002204,2.10e-17,167;UBERON:0003081,1.21e-15,203;UBERON:0000926,1.06e-07,315;UBERON:0004120,1.06e-07,315;UBERON:0006603,1.06e-07,315;UBERON:0002384,1.48e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,1.10799081706375,1.00272223735071,0,0,0.32389366601898,0.257575567634187,0.436194716338694,0,0,2.55671940596253,0.822335776043652,0.309706370895104,16.6861587546847,2.30544635876191,4.25668013799453,35.1640594351351,9.68227025375739,5.41705946377367,2.07066573496865,0.545812300115692,0.224723484445085,21.4258724659632,6.41858054152187,23.6554736545645,4.94776950280074,1.79517291859469,2.13112375266347,11.8985787837719,13.0498601678962,18.6846674698673,7.5374599577023,4.69334626578181,1.52032191293582,15.7403870684676,5.15588690382591,7.91155968602211,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,1.72131935057184,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,1.00528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01439377059586,1.74306691720059,1.69954085009497,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,1.55776328755086,0.232420756919918,0,0,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,4.53614521001611,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,5.59871257791253,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0,1.91400695839152,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.435296032902013,0,0.171986032471617,0,0,0,0.0969890164884194,0.617792886840502,0,0,0.993573058514948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0.414706207840855,0.53168342911599,1.04349012362347,0.901545653983311,6.85449381903832,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,2.02516545277025,0.419638523158333,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,1.5018336599544,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0.653150243690884,0,0.134704106029175,0,0,0.0814032686109745,0.960546112899439,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SERPINB2 | |||
}} |
Revision as of 18:02, 11 September 2013
Short description: | p3@SERPINB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SERPINB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_uc002ljp.1, uc002ljq.1_5end |
EntrezGene: | SERPINB2 |
HGNC: | 8584 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.83e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-66 | 42 |
defensive cell | 5.47e-62 | 48 |
phagocyte | 5.47e-62 | 48 |
macrophage dendritic cell progenitor | 2.06e-50 | 61 |
monopoietic cell | 2.22e-48 | 59 |
monocyte | 2.22e-48 | 59 |
monoblast | 2.22e-48 | 59 |
promonocyte | 2.22e-48 | 59 |
granulocyte monocyte progenitor cell | 2.05e-45 | 67 |
myeloid lineage restricted progenitor cell | 1.08e-42 | 66 |
myeloid leukocyte | 1.10e-38 | 72 |
myeloid cell | 5.51e-26 | 108 |
common myeloid progenitor | 5.51e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 8.61e-23 | 120 |
nongranular leukocyte | 4.20e-22 | 115 |
leukocyte | 2.09e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.85e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-15 | 161 |
hematopoietic stem cell | 1.45e-14 | 168 |
hematopoietic cell | 1.61e-13 | 177 |
mesenchymal cell | 2.90e-08 | 354 |
connective tissue cell | 5.79e-08 | 361 |
somatic stem cell | 2.56e-07 | 433 |
stem cell | 4.81e-07 | 441 |
motile cell | 6.56e-07 | 386 |
multi fate stem cell | 7.33e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.24e-39 | 76 |
bone element | 4.44e-36 | 82 |
skeletal element | 2.33e-32 | 90 |
immune system | 3.98e-31 | 93 |
hematopoietic system | 3.07e-29 | 98 |
blood island | 3.07e-29 | 98 |
skeletal system | 1.54e-28 | 100 |
hemolymphoid system | 5.51e-26 | 108 |
musculoskeletal system | 2.10e-17 | 167 |
lateral plate mesoderm | 1.21e-15 | 203 |
mesoderm | 1.06e-07 | 315 |
mesoderm-derived structure | 1.06e-07 | 315 |
presumptive mesoderm | 1.06e-07 | 315 |
connective tissue | 1.48e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.