FFCP PHASE1:Hg19::chr19:17378278..17378293,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25008 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc002nfw.2_5end | |||
|description=CAGE_peak_2_at_BABAM1_5end | |||
|id=chr19:17378278..17378293,+ | |||
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|ontology_enrichment_celltype_v019=CL:0000359;1.36e-11;32!CL:0000192;5.58e-10;43!CL:0000187;1.83e-08;55!CL:1000449;3.19e-08;15!CL:0000393;1.13e-07;61!CL:0000211;1.13e-07;61!CL:0002681;4.21e-07;12!CL:0002584;4.21e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.73e-25,250;CL:0000222,4.33e-24,121;CL:0000680,2.27e-15,58;CL:0000056,2.27e-15,58;CL:0000355,2.27e-15,58;CL:0000393,3.32e-15,61;CL:0000211,3.32e-15,61;CL:0000187,3.13e-14,55;CL:0000192,7.87e-14,43;CL:0000514,7.87e-14,43;CL:0000066,1.29e-12,253;CL:0000359,3.80e-12,32;CL:0000213,6.30e-09,58;CL:0000215,6.30e-09,58;CL:1000449,3.40e-08,15;CL:0002078,1.26e-07,45;CL:0000115,3.44e-07,36;CL:0002681,4.33e-07,12;CL:0002584,4.33e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.58e-10;43!CL:0000355;9.86e-09;58!CL:0000222;2.85e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.74e-14!79;UBERON:0007798!2.74e-14!79;UBERON:0001637!6.70e-14!42;UBERON:0003509!6.70e-14!42;UBERON:0004572!6.70e-14!42;UBERON:0000486!9.58e-14!82;UBERON:0000914!1.01e-13!83;UBERON:0002329!1.01e-13!83;UBERON:0003077!1.01e-13!83;UBERON:0003059!1.01e-13!83;UBERON:0007282!1.01e-13!83;UBERON:0009618!1.01e-13!83;UBERON:0007285!1.01e-13!83;UBERON:0004535!1.62e-13!110;UBERON:0001981!2.80e-13!60;UBERON:0007500!2.80e-13!60;UBERON:0004537!2.80e-13!60;UBERON:0006965!2.80e-13!60;UBERON:0004290!2.83e-13!70;UBERON:0001134!3.93e-13!61;UBERON:0002036!3.93e-13!61;UBERON:0003082!3.93e-13!61;UBERON:0001009!2.02e-12!113;UBERON:0000055!2.48e-12!69;UBERON:0005256!3.02e-12!143;UBERON:0004872!1.38e-11!84;UBERON:0002385!1.38e-11!63;UBERON:0001015!1.38e-11!63;UBERON:0000383!1.38e-11!63;UBERON:0003914!1.63e-11!118;UBERON:0004573!6.03e-11!33;UBERON:0004571!6.03e-11!33;UBERON:0000490!8.53e-11!138;UBERON:0002100!2.81e-08!216;UBERON:0003104!9.44e-08!238;UBERON:0009142!9.44e-08!238;UBERON:0004211!1.73e-07!16;UBERON:0001285!1.73e-07!16;UBERON:0007684!1.73e-07!16;UBERON:0003220!1.73e-07!16;UBERON:0004208!1.73e-07!16;UBERON:0000119!4.40e-07!312;UBERON:0000483!7.35e-07!309;UBERON:0000353!9.43e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.68e-10;42!UBERON:0003509;2.68e-10;42!UBERON:0004572;2.68e-10;42!UBERON:0004573;4.36e-10;33!UBERON:0004571;4.36e-10;33!UBERON:0003914;9.12e-10;74!UBERON:0007500;1.74e-09;56!UBERON:0001981;1.74e-09;56!UBERON:0004537;1.74e-09;56!UBERON:0006555;3.19e-08;15!UBERON:0004819;3.19e-08;15!UBERON:0001285;3.19e-08;15!UBERON:0007684;3.19e-08;15!UBERON:0000353;6.42e-08;15!UBERON:0002049;3.65e-07;75!UBERON:0007798;3.65e-07;75!UBERON:0001225;4.21e-07;12!UBERON:0008987;4.21e-07;12!UBERON:0000055;6.16e-07;65 | |||
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| |||
|short_description=p2@BABAM1 | |||
}} |
Revision as of 19:17, 11 September 2013
Short description: | p2@BABAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BABAM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_uc002nfw.2_5end |
EntrezGene: | BABAM1 |
HGNC: | 25008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.73e-25 | 250 |
mesodermal cell | 4.33e-24 | 121 |
muscle precursor cell | 2.27e-15 | 58 |
myoblast | 2.27e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-15 | 58 |
electrically responsive cell | 3.32e-15 | 61 |
electrically active cell | 3.32e-15 | 61 |
muscle cell | 3.13e-14 | 55 |
smooth muscle cell | 7.87e-14 | 43 |
smooth muscle myoblast | 7.87e-14 | 43 |
epithelial cell | 1.29e-12 | 253 |
vascular associated smooth muscle cell | 3.80e-12 | 32 |
lining cell | 6.30e-09 | 58 |
barrier cell | 6.30e-09 | 58 |
epithelial cell of nephron | 3.40e-08 | 15 |
meso-epithelial cell | 1.26e-07 | 45 |
endothelial cell | 3.44e-07 | 36 |
kidney cortical cell | 4.33e-07 | 12 |
renal cortical epithelial cell | 4.33e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.