FFCP PHASE1:Hg19::chr19:40732594..40732598,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79935|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25805|TSSclassifier=S|UniProt=B4DX65,Q9H8S5|association_with_transcript=0bp_to_ENST00000430325,ENST00000433940,NM_024877,uc002ond.2,uc010xvi.1_5end|description=CAGE_peak_1_at_CNTD2_5end|id=chr19:40732594..40732598,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.51e-12;12!CL:0002553;7.03e-08;1!CL:0002591;3.20e-07;1|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-12,12;CL:0002553,7.03e-08,1;CL:0002591,4.34e-07,1|ontology_enrichment_development_v019=UBERON:0006215;1.15e-19;3!UBERON:0004161;2.33e-13;11!UBERON:0009497;2.82e-11;13!UBERON:0001041;4.10e-09;30!UBERON:0003104;1.11e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;3.95e-07;14|ontology_enrichment_disease_v019_2=DOID:3119,3.89e-07,14|ontology_enrichment_uberon=UBERON:0001049!2.98e-14!57;UBERON:0005068!2.98e-14!57;UBERON:0006241!2.98e-14!57;UBERON:0007135!2.98e-14!57;UBERON:0000025!3.31e-13!194;UBERON:0002616!2.31e-12!59;UBERON:0000119!3.07e-12!312;UBERON:0000483!1.10e-11!309;UBERON:0005743!2.00e-11!86;UBERON:0001017!3.34e-11!82;UBERON:0000475!5.87e-11!365;UBERON:0000481!8.72e-11!347;UBERON:0004111!1.41e-10!241;UBERON:0000073!2.64e-10!94;UBERON:0001016!2.64e-10!94;UBERON:0003075!4.70e-10!86;UBERON:0007284!4.70e-10!86;UBERON:0000477!1.80e-09!286;UBERON:0000955!1.87e-09!69;UBERON:0006238!1.87e-09!69;UBERON:0002020!4.03e-09!34;UBERON:0003528!4.03e-09!34;UBERON:0002346!4.42e-09!90;UBERON:0002780!5.07e-09!41;UBERON:0001890!5.07e-09!41;UBERON:0006240!5.07e-09!41;UBERON:0001869!7.50e-09!32;UBERON:0001893!9.81e-09!34;UBERON:0003080!1.22e-08!42;UBERON:0003929!1.28e-08!54;UBERON:0002791!2.09e-08!33;UBERON:0007023!5.67e-08!115;UBERON:0009497!6.91e-08!25;UBERON:0000015!6.91e-08!25;UBERON:0002423!6.91e-08!25;UBERON:0006235!6.91e-08!25;UBERON:0004161!6.91e-08!25;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15;UBERON:0008835!2.07e-07!22;UBERON:0003894!2.07e-07!22;UBERON:0003056!4.03e-07!61;UBERON:0007499!5.84e-07!25;UBERON:0009854!6.63e-07!23;UBERON:0002107!9.11e-07!19;UBERON:0006925!9.11e-07!19;UBERON:0008836!9.11e-07!19|ontology_enrichment_uberon_v019=UBERON:0002107;1.27e-14;19!UBERON:0006925;1.27e-14;19!UBERON:0002368;2.49e-14;33!UBERON:0002423;3.77e-14;25!UBERON:0000007;8.98e-13;2!UBERON:0002037;4.33e-10;6!UBERON:0002365;1.00e-08;31!UBERON:0002330;1.00e-08;31!UBERON:0000949;1.74e-08;43!UBERON:0004913;3.20e-07;1!UBERON:0003703;3.20e-07;1!UBERON:0001174;3.20e-07;1!UBERON:0004914;3.20e-07;1!UBERON:0002680;7.24e-07;9!UBERON:0001895;7.24e-07;9!UBERON:0003296;8.19e-07;4!UBERON:0010133;8.19e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.63e-16,22;UBERON:0003894,2.63e-16,22;UBERON:0009854,1.51e-15,23;UBERON:0002368,2.05e-15,35;UBERON:0002107,1.11e-14,19;UBERON:0006925,1.11e-14,19;UBERON:0008836,1.11e-14,19;UBERON:0007499,3.26e-14,25;UBERON:0009497,3.26e-14,25;UBERON:0000015,3.26e-14,25;UBERON:0002423,3.26e-14,25;UBERON:0006235,3.26e-14,25;UBERON:0004161,3.26e-14,25;UBERON:0003929,8.41e-14,54;UBERON:0009856,1.27e-13,26;UBERON:0000007,1.22e-12,2;UBERON:0005911,9.49e-12,82;UBERON:0000949,1.32e-11,45;UBERON:0002530,2.62e-10,59;UBERON:0002037,4.47e-10,6;UBERON:0006215,4.47e-10,6;UBERON:0002365,1.14e-08,31;UBERON:0002330,1.14e-08,31;UBERON:0001041,9.57e-08,87;UBERON:0005172,1.37e-07,54;UBERON:0005173,1.37e-07,54;UBERON:0004913,2.83e-07,1;UBERON:0003703,2.83e-07,1;UBERON:0001174,2.83e-07,1;UBERON:0004914,2.83e-07,1;UBERON:0004921,3.22e-07,118;UBERON:0002680,7.39e-07,9;UBERON:0001895,7.39e-07,9;UBERON:0010092,7.39e-07,9;UBERON:0003296,9.50e-07,4;UBERON:0010133,9.50e-07,4|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0.662648841607426,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,0.982827216677626,1.77236972004421,0,4.91953754172454,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,1.30788020649984,0.073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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25805 | |||
|TSSclassifier=S | |||
|UniProt=B4DX65,Q9H8S5 | |||
|association_with_transcript=0bp_to_ENST00000430325,ENST00000433940,NM_024877,uc002ond.2,uc010xvi.1_5end | |||
|description=CAGE_peak_1_at_CNTD2_5end | |||
|id=chr19:40732594..40732598,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.51e-12;12!CL:0002553;7.03e-08;1!CL:0002591;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-12,12;CL:0002553,7.03e-08,1;CL:0002591,4.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.15e-19;3!UBERON:0004161;2.33e-13;11!UBERON:0009497;2.82e-11;13!UBERON:0001041;4.10e-09;30!UBERON:0003104;1.11e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;3.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.89e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.98e-14!57;UBERON:0005068!2.98e-14!57;UBERON:0006241!2.98e-14!57;UBERON:0007135!2.98e-14!57;UBERON:0000025!3.31e-13!194;UBERON:0002616!2.31e-12!59;UBERON:0000119!3.07e-12!312;UBERON:0000483!1.10e-11!309;UBERON:0005743!2.00e-11!86;UBERON:0001017!3.34e-11!82;UBERON:0000475!5.87e-11!365;UBERON:0000481!8.72e-11!347;UBERON:0004111!1.41e-10!241;UBERON:0000073!2.64e-10!94;UBERON:0001016!2.64e-10!94;UBERON:0003075!4.70e-10!86;UBERON:0007284!4.70e-10!86;UBERON:0000477!1.80e-09!286;UBERON:0000955!1.87e-09!69;UBERON:0006238!1.87e-09!69;UBERON:0002020!4.03e-09!34;UBERON:0003528!4.03e-09!34;UBERON:0002346!4.42e-09!90;UBERON:0002780!5.07e-09!41;UBERON:0001890!5.07e-09!41;UBERON:0006240!5.07e-09!41;UBERON:0001869!7.50e-09!32;UBERON:0001893!9.81e-09!34;UBERON:0003080!1.22e-08!42;UBERON:0003929!1.28e-08!54;UBERON:0002791!2.09e-08!33;UBERON:0007023!5.67e-08!115;UBERON:0009497!6.91e-08!25;UBERON:0000015!6.91e-08!25;UBERON:0002423!6.91e-08!25;UBERON:0006235!6.91e-08!25;UBERON:0004161!6.91e-08!25;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15;UBERON:0008835!2.07e-07!22;UBERON:0003894!2.07e-07!22;UBERON:0003056!4.03e-07!61;UBERON:0007499!5.84e-07!25;UBERON:0009854!6.63e-07!23;UBERON:0002107!9.11e-07!19;UBERON:0006925!9.11e-07!19;UBERON:0008836!9.11e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.27e-14;19!UBERON:0006925;1.27e-14;19!UBERON:0002368;2.49e-14;33!UBERON:0002423;3.77e-14;25!UBERON:0000007;8.98e-13;2!UBERON:0002037;4.33e-10;6!UBERON:0002365;1.00e-08;31!UBERON:0002330;1.00e-08;31!UBERON:0000949;1.74e-08;43!UBERON:0004913;3.20e-07;1!UBERON:0003703;3.20e-07;1!UBERON:0001174;3.20e-07;1!UBERON:0004914;3.20e-07;1!UBERON:0002680;7.24e-07;9!UBERON:0001895;7.24e-07;9!UBERON:0003296;8.19e-07;4!UBERON:0010133;8.19e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.63e-16,22;UBERON:0003894,2.63e-16,22;UBERON:0009854,1.51e-15,23;UBERON:0002368,2.05e-15,35;UBERON:0002107,1.11e-14,19;UBERON:0006925,1.11e-14,19;UBERON:0008836,1.11e-14,19;UBERON:0007499,3.26e-14,25;UBERON:0009497,3.26e-14,25;UBERON:0000015,3.26e-14,25;UBERON:0002423,3.26e-14,25;UBERON:0006235,3.26e-14,25;UBERON:0004161,3.26e-14,25;UBERON:0003929,8.41e-14,54;UBERON:0009856,1.27e-13,26;UBERON:0000007,1.22e-12,2;UBERON:0005911,9.49e-12,82;UBERON:0000949,1.32e-11,45;UBERON:0002530,2.62e-10,59;UBERON:0002037,4.47e-10,6;UBERON:0006215,4.47e-10,6;UBERON:0002365,1.14e-08,31;UBERON:0002330,1.14e-08,31;UBERON:0001041,9.57e-08,87;UBERON:0005172,1.37e-07,54;UBERON:0005173,1.37e-07,54;UBERON:0004913,2.83e-07,1;UBERON:0003703,2.83e-07,1;UBERON:0001174,2.83e-07,1;UBERON:0004914,2.83e-07,1;UBERON:0004921,3.22e-07,118;UBERON:0002680,7.39e-07,9;UBERON:0001895,7.39e-07,9;UBERON:0010092,7.39e-07,9;UBERON:0003296,9.50e-07,4;UBERON:0010133,9.50e-07,4 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0.662648841607426,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,0.982827216677626,1.77236972004421,0,4.91953754172454,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,1.30788020649984,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.587403472388222,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0.348631135379878,2.1754700926492,0,0,0,0,0.131124414959424,0.451199612907412,0.462092022626489,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.764628819135115,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0.322260734604821,0,0,0,0.165284915360978,0,0,0.2023155617111,0.929691098594572,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0,2.11300293513511,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.755798243562828,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,3.9064164162785,0.437299999980979,0,0,0.254253650292766,0,0,0,0,0,0.482385754501632,6.10326945268333,4.64432891711143,3.84211904639612,0,0,0,0.0769502585037971,0,0,0.538545866458633,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.698906672968121,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,1.16495949527454,1.49688046383725,0.741742725430498,1.3480708770837,0.0984274815147488,0,0,0.408610218334727,0.321506296930038,0.825236619583403,0,0,0,0.121499113316049,0,1.73372556058236,2.20309270166992,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0.340776043570843,0,1.02586563574658,2.65013777824443,0.258565912723101,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0,0,1.63205341010842,0.7520696820681,0.612691153526923,1.31149052283922,0,0.886068179966986,0.366078794705889,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2079904759966,0,0,0.192687675289379,0,0.159633859057151,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,1.33070477595341,0.0675375846183947,0.781078098613847,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,1.21393120847326,1.13831095675649,0.79832133146375,0,0,0.40781839786099,0.131545547125698,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0.560544326627578,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,2.65005630761156,0,0,0,0,0,13.5684888808021,1.19370465096821,0,0,0,7.85006786546702,0,0.218559560503957,6.1141248526998,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0,4.18105053337742,0.203977659483963,0.26721740526556,0,0.50141507858475,0.454672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| |||
|short_description=p1@CNTD2 | |||
}} |
Revision as of 20:40, 11 September 2013
Short description: | p1@CNTD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CNTD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000430325, ENST00000433940, NM_024877, uc002ond.2, uc010xvi.1_5end |
EntrezGene: | CNTD2 |
HGNC: | 25805 |
UniProt: | B4DX65Q9H8S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.92e-12 | 12 |
lung fibroblast | 7.03e-08 | 1 |
smooth muscle cell of the pulmonary artery | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.89e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.