FFCP PHASE1:Hg19::chr19:58666502..58666519,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79673|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14209|TSSclassifier=S|UniProt=|association_with_transcript=-25bp_to_ENST00000500161,uc002qrp.1_5end|description=CAGE_peak_4_at_ZNF329_5end|id=chr19:58666502..58666519,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000791;8.70e-07;18!CL:0000789;8.70e-07;18!CL:0002419;8.70e-07;18|ontology_enrichment_celltype_v019_2=CL:0000791,9.86e-07,18;CL:0000789,9.86e-07,18;CL:0002420,9.86e-07,18;CL:0002419,9.86e-07,18;CL:0000790,9.86e-07,18|ontology_enrichment_development_v019=CL:0000790;8.70e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.21e-24!115;UBERON:0001049!2.26e-15!57;UBERON:0005068!2.26e-15!57;UBERON:0006241!2.26e-15!57;UBERON:0007135!2.26e-15!57;UBERON:0003075!8.24e-13!86;UBERON:0007284!8.24e-13!86;UBERON:0003080!2.16e-12!42;UBERON:0002616!2.69e-12!59;UBERON:0002780!5.25e-12!41;UBERON:0001890!5.25e-12!41;UBERON:0006240!5.25e-12!41;UBERON:0002346!8.36e-12!90;UBERON:0001893!4.83e-11!34;UBERON:0002791!1.10e-10!33;UBERON:0005743!1.17e-10!86;UBERON:0002020!1.36e-10!34;UBERON:0003528!1.36e-10!34;UBERON:0001869!2.50e-10!32;UBERON:0001017!3.91e-10!82;UBERON:0003056!9.69e-10!61;UBERON:0000955!9.74e-10!69;UBERON:0006238!9.74e-10!69;UBERON:0000073!1.04e-08!94;UBERON:0001016!1.04e-08!94;UBERON:0000153!1.32e-08!129;UBERON:0007811!1.32e-08!129;UBERON:0000033!4.86e-08!123;UBERON:0001950!5.43e-08!20;UBERON:0002619!1.22e-07!22;UBERON:0000956!2.82e-07!25;UBERON:0000203!2.82e-07!25;UBERON:0004121!7.85e-07!169|ontology_enrichment_uberon_v019=UBERON:0001950;1.78e-08;20!UBERON:0002619;1.35e-07;22!UBERON:0001869;4.43e-07;32!UBERON:0002791;4.77e-07;32!UBERON:0001893;6.63e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.91e-11,114;UBERON:0001950,1.44e-08,20;UBERON:0002780,7.11e-08,41;UBERON:0001890,7.11e-08,41;UBERON:0003080,7.11e-08,41;UBERON:0006240,7.11e-08,41;UBERON:0002619,1.12e-07,22;UBERON:0000073,1.15e-07,53;UBERON:0002616,1.15e-07,53;UBERON:0002791,1.61e-07,32;UBERON:0001869,1.61e-07,32;UBERON:0001049,4.37e-07,56;UBERON:0005068,4.37e-07,56;UBERON:0006241,4.37e-07,56;UBERON:0007135,4.37e-07,56;UBERON:0003528,5.81e-07,34;UBERON:0002020,5.81e-07,34;UBERON:0001893,5.81e-07,34|phase1_expression=0,0.642301571672949,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.868043482863407,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0.365328307529268,1.75996244461323,0,1.77901850772711,2.13365111283254,0.800791974072025,0.574752439954483,1.98313461835459,0.954053754535364,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,0.560508562981536,0.526768169550154,0.983548850569165,1.57204305099666,0.411202997999018,0.167186495390678,2.28145586643513,1.89379122293893,1.94826728407911,0,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0,0,0,1.77943875794473,2.94294910898684,3.1360657141493,0,1.14966148080576,1.03088233644789,0.253019692019503,2.54852331459277,0,0.950452044448374,0.301150238155546,2.04778577847069,2.49861453104692,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,1.15859523106239,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.458426764241994,1.09288586487763,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0.490385709340376,0.302714855289863,0,0.937285727335186,0.936480230490962,1.1409436430889,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.751190294532984,0.113432183160021,0.358779271377724,0,0.423863802319124,0,0.412210116953756,0,0.18611685633159,0.168776332241266,0.487185025805993,1.00973509697646,0.552299391853796,0.484938170456436,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0.590789906681404,1.32438929824395,0,0.171567810298526,0.109750285408626,0,0.201057944823262,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79673 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14209 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000500161,uc002qrp.1_5end | |||
|description=CAGE_peak_4_at_ZNF329_5end | |||
|id=chr19:58666502..58666519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.70e-07;18!CL:0000789;8.70e-07;18!CL:0002419;8.70e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.86e-07,18;CL:0000789,9.86e-07,18;CL:0002420,9.86e-07,18;CL:0002419,9.86e-07,18;CL:0000790,9.86e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;8.70e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.21e-24!115;UBERON:0001049!2.26e-15!57;UBERON:0005068!2.26e-15!57;UBERON:0006241!2.26e-15!57;UBERON:0007135!2.26e-15!57;UBERON:0003075!8.24e-13!86;UBERON:0007284!8.24e-13!86;UBERON:0003080!2.16e-12!42;UBERON:0002616!2.69e-12!59;UBERON:0002780!5.25e-12!41;UBERON:0001890!5.25e-12!41;UBERON:0006240!5.25e-12!41;UBERON:0002346!8.36e-12!90;UBERON:0001893!4.83e-11!34;UBERON:0002791!1.10e-10!33;UBERON:0005743!1.17e-10!86;UBERON:0002020!1.36e-10!34;UBERON:0003528!1.36e-10!34;UBERON:0001869!2.50e-10!32;UBERON:0001017!3.91e-10!82;UBERON:0003056!9.69e-10!61;UBERON:0000955!9.74e-10!69;UBERON:0006238!9.74e-10!69;UBERON:0000073!1.04e-08!94;UBERON:0001016!1.04e-08!94;UBERON:0000153!1.32e-08!129;UBERON:0007811!1.32e-08!129;UBERON:0000033!4.86e-08!123;UBERON:0001950!5.43e-08!20;UBERON:0002619!1.22e-07!22;UBERON:0000956!2.82e-07!25;UBERON:0000203!2.82e-07!25;UBERON:0004121!7.85e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.78e-08;20!UBERON:0002619;1.35e-07;22!UBERON:0001869;4.43e-07;32!UBERON:0002791;4.77e-07;32!UBERON:0001893;6.63e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.91e-11,114;UBERON:0001950,1.44e-08,20;UBERON:0002780,7.11e-08,41;UBERON:0001890,7.11e-08,41;UBERON:0003080,7.11e-08,41;UBERON:0006240,7.11e-08,41;UBERON:0002619,1.12e-07,22;UBERON:0000073,1.15e-07,53;UBERON:0002616,1.15e-07,53;UBERON:0002791,1.61e-07,32;UBERON:0001869,1.61e-07,32;UBERON:0001049,4.37e-07,56;UBERON:0005068,4.37e-07,56;UBERON:0006241,4.37e-07,56;UBERON:0007135,4.37e-07,56;UBERON:0003528,5.81e-07,34;UBERON:0002020,5.81e-07,34;UBERON:0001893,5.81e-07,34 | |||
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| |||
|short_description=p4@ZNF329 | |||
}} |
Revision as of 22:39, 11 September 2013
Short description: | p4@ZNF329 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ZNF329_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000500161, uc002qrp.1_5end |
EntrezGene: | ZNF329 |
HGNC: | 14209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.86e-07 | 18 |
alpha-beta T cell | 9.86e-07 | 18 |
immature T cell | 9.86e-07 | 18 |
mature T cell | 9.86e-07 | 18 |
immature alpha-beta T cell | 9.86e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.91e-11 | 114 |
neocortex | 1.44e-08 | 20 |
regional part of forebrain | 7.11e-08 | 41 |
forebrain | 7.11e-08 | 41 |
anterior neural tube | 7.11e-08 | 41 |
future forebrain | 7.11e-08 | 41 |
regional part of cerebral cortex | 1.12e-07 | 22 |
regional part of nervous system | 1.15e-07 | 53 |
regional part of brain | 1.15e-07 | 53 |
regional part of telencephalon | 1.61e-07 | 32 |
cerebral hemisphere | 1.61e-07 | 32 |
neural tube | 4.37e-07 | 56 |
neural rod | 4.37e-07 | 56 |
future spinal cord | 4.37e-07 | 56 |
neural keel | 4.37e-07 | 56 |
brain grey matter | 5.81e-07 | 34 |
gray matter | 5.81e-07 | 34 |
telencephalon | 5.81e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.