FFCP PHASE1:Hg19::chr1:100111546..100111567,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54873|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15846|TSSclassifier=S|UniProt=Q9NP74|association_with_transcript=47bp_to_ENST00000263174_5end|coexpression_cluster_id=C2508|description=CAGE_peak_3_at_PALMD_5end|id=chr1:100111546..100111567,+|ontology_enrichment_celltype=CL:0002139!1.83e-19!24;CL:0000115!3.55e-15!35;CL:0000071!1.35e-14!18;CL:0002546!1.35e-14!18;CL:0002078!3.35e-12!44;CL:1000413!9.91e-09!9;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57|ontology_enrichment_celltype_v019=CL:0002139;9.66e-31;24!CL:0000115;2.22e-22;36!CL:0000071;2.37e-22;18!CL:1000413;3.54e-14;9!CL:0002078;3.57e-14;45!CL:0002138;5.61e-10;6!CL:0002544;7.96e-10;6!CL:0002543;3.54e-09;6!CL:0000213;4.01e-09;58!CL:0000215;4.01e-09;58|ontology_enrichment_celltype_v019_2=CL:0002139,4.72e-31,24;CL:0000115,6.94e-26,36;CL:0000071,1.77e-22,18;CL:0002546,1.77e-22,18;CL:0002078,1.51e-20,45;CL:1000413,3.30e-14,9;CL:0000213,7.08e-14,58;CL:0000215,7.08e-14,58;CL:0005020,3.60e-10,6;CL:0002138,3.60e-10,6;CL:0005022,3.60e-10,6;CL:0002544,8.35e-10,6;CL:0002543,1.90e-09,6;CL:0000222,7.28e-08,121|ontology_enrichment_development_v019=CL:0002546;2.37e-22;18!CL:0005022;5.61e-10;6!UBERON:0003104;4.74e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!8.82e-33!286;UBERON:0004111!2.31e-31!241;UBERON:0007023!6.03e-31!115;UBERON:0000025!8.23e-31!194;UBERON:0000483!5.54e-21!309;UBERON:0000467!2.07e-20!625;UBERON:0000119!2.75e-20!312;UBERON:0000480!3.07e-20!626;UBERON:0000468!2.17e-18!659;UBERON:0000481!2.34e-17!347;UBERON:0000055!1.18e-16!69;UBERON:0001049!4.06e-16!57;UBERON:0005068!4.06e-16!57;UBERON:0006241!4.06e-16!57;UBERON:0007135!4.06e-16!57;UBERON:0004872!1.00e-14!84;UBERON:0001986!1.35e-14!18;UBERON:0004638!1.35e-14!18;UBERON:0004852!1.35e-14!18;UBERON:0003080!2.19e-14!42;UBERON:0001981!2.57e-14!60;UBERON:0007500!2.57e-14!60;UBERON:0004537!2.57e-14!60;UBERON:0006965!2.57e-14!60;UBERON:0001017!3.58e-14!82;UBERON:0002049!3.59e-14!79;UBERON:0007798!3.59e-14!79;UBERON:0003914!3.77e-14!118;UBERON:0005743!4.02e-14!86;UBERON:0000955!6.40e-14!69;UBERON:0006238!6.40e-14!69;UBERON:0003075!8.88e-14!86;UBERON:0007284!8.88e-14!86;UBERON:0002780!1.17e-13!41;UBERON:0001890!1.17e-13!41;UBERON:0006240!1.17e-13!41;UBERON:0002616!1.22e-13!59;UBERON:0000922!1.55e-12!612;UBERON:0002050!1.56e-12!605;UBERON:0005423!1.56e-12!605;UBERON:0002346!2.56e-12!90;UBERON:0000923!3.45e-12!604;UBERON:0005291!3.45e-12!604;UBERON:0006598!3.45e-12!604;UBERON:0002532!3.45e-12!604;UBERON:0000475!4.03e-12!365;UBERON:0000487!5.84e-12!22;UBERON:0000073!9.31e-12!94;UBERON:0001016!9.31e-12!94;UBERON:0006914!2.01e-11!25;UBERON:0001009!2.37e-11!113;UBERON:0001893!1.24e-10!34;UBERON:0002020!1.70e-10!34;UBERON:0003528!1.70e-10!34;UBERON:0002791!2.01e-10!33;UBERON:0003056!5.05e-10!61;UBERON:0004535!5.35e-10!110;UBERON:0001869!5.56e-10!32;UBERON:0000062!1.33e-09!511;UBERON:0000490!2.45e-09!138;UBERON:0003915!9.91e-09!9;UBERON:0004700!9.91e-09!9;UBERON:0001917!9.91e-09!9;UBERON:0002619!1.05e-08!22;UBERON:0000153!1.24e-08!129;UBERON:0007811!1.24e-08!129;UBERON:0001637!2.15e-08!42;UBERON:0003509!2.15e-08!42;UBERON:0004572!2.15e-08!42;UBERON:0000064!2.84e-08!219;UBERON:0000033!2.91e-08!123;UBERON:0001950!4.68e-08!20;UBERON:0000956!1.23e-07!25;UBERON:0000203!1.23e-07!25;UBERON:0003104!1.91e-07!238;UBERON:0009142!1.91e-07!238;UBERON:0004921!2.81e-07!129;UBERON:0004185!2.81e-07!129;UBERON:0001041!3.04e-07!98|ontology_enrichment_uberon_v019=UBERON:0004638;2.37e-22;18!UBERON:0001986;2.37e-22;18!UBERON:0004852;2.37e-22;18!UBERON:0000487;2.47e-19;22!UBERON:0006914;2.51e-16;25!UBERON:0003915;3.54e-14;9!UBERON:0004700;3.54e-14;9!UBERON:0001917;3.54e-14;9!UBERON:0000055;1.30e-10;65!UBERON:0000490;2.14e-10;33!UBERON:0007500;2.59e-08;56!UBERON:0001981;2.59e-08;56!UBERON:0004537;2.59e-08;56!UBERON:0002049;5.74e-08;75!UBERON:0007798;5.74e-08;75!UBERON:0001637;7.17e-08;42!UBERON:0003509;7.17e-08;42!UBERON:0004572;7.17e-08;42!UBERON:0001638;8.77e-08;9!UBERON:0003920;8.77e-08;9!UBERON:0004582;8.77e-08;9!UBERON:0001473;3.32e-07;8!UBERON:0004536;3.32e-07;8!UBERON:0006558;3.32e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.30e-23,68;UBERON:0004638,1.77e-22,18;UBERON:0001986,1.77e-22,18;UBERON:0004852,1.77e-22,18;UBERON:0000487,1.62e-19,22;UBERON:0002049,2.24e-18,78;UBERON:0007798,2.24e-18,78;UBERON:0004111,4.11e-18,240;UBERON:0007500,4.56e-18,59;UBERON:0001981,4.56e-18,59;UBERON:0004537,4.56e-18,59;UBERON:0006965,4.56e-18,59;UBERON:0004872,3.29e-17,83;UBERON:0006914,1.74e-16,25;UBERON:0000025,2.88e-16,192;UBERON:0003914,4.43e-16,117;UBERON:0001009,1.25e-15,112;UBERON:0003915,3.30e-14,9;UBERON:0004700,3.30e-14,9;UBERON:0001917,3.30e-14,9;UBERON:0004535,1.94e-13,109;UBERON:0007023,5.38e-13,114;UBERON:0000483,4.22e-09,306;UBERON:0000119,7.82e-09,309;UBERON:0001637,2.96e-08,42;UBERON:0003509,2.96e-08,42;UBERON:0004572,2.96e-08,42;UBERON:0001638,6.17e-08,9;UBERON:0003920,6.17e-08,9;UBERON:0004582,6.17e-08,9;UBERON:0001473,2.41e-07,8;UBERON:0004536,2.41e-07,8;UBERON:0006558,2.41e-07,8;UBERON:0000490,3.35e-07,148;UBERON:0003103,3.78e-07,68;UBERON:0007100,3.93e-07,27|phase1_expression=0,0.214100523890983,0.704772020479856,0,0.893922188854576,0,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.80719576192283,0,1.59331170856906,0,0,0.850813354476611,0,0,0.785874452986276,0,0,0,0,0,0,0,0,3.18019851786728,2.58070378531837,4.85996702250632,3.39184765154406,4.61449379830897,6.05259692268148,3.76190939766259,7.23566925674121,9.24992282985447,15.0624275744102,1.20848795132744,0.760272105718513,3.1728067481262,3.30896772311282,4.0507097394088,7.0546785344423,5.83776368828041,3.71617885594963,1.53316637465883,2.84779697870439,1.83201743930407,0,0,0,0,0.759783069987479,0.926864265692532,0,0,0,0,0.49333509683432,0.311211035399766,1.48181739276657,0.490385709340376,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,1.70148274740032,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,1.30137480043828,0.842923450390509,1.20505514941741,0.772057809126758,1.52515610864684,1.89816495288877,0.808987848960987,0.588664395376038,0.769494313892781,3.69077727312324,0,0,0,5.07020139287323,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.587043471179108,2.7429625074604,1.85194205030644,3.23432058798817,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,1.96967059563885,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.831883446123229,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,1.13733384070897,0.850468526382578,2.15915916102139,4.62681758070868,0,0,0,0,0,0,0,0.256450125116389,0,0,2.26690225624989,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0.308033580176089,2.66153015158511,0,1.11194531462352,0.715624433709956,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0.808729926293264,3.17020642346017,1.68503382495592,0,0.243713489631284,0,0.272999822815972,0,0,0,4.64407282668854,5.26141062304515,0,0,1.01455188481352,0,0,0,0,1.426684205925,0,0.422215270595328,0.329294892959902,0,0,0.192444225451024,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,5.9821479831385,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35096621849796,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,1.19548792950642,0.828851746593443,0,0.20453736500431,0,1.24415835064723,0,0.358042349351218,0,0.690503839458535,0,0,0,0.371072392647405,1.99613798001194,0,0.962059999958153,5.07499702804355,0.1137934482855,0,0,0,0,0,1.77148277162768,0.60298219312704,0,0.221158519862449,0,1.31631238292384,0.653630781113941,0.697118721393016,3.23191085715948,0.797594390929008,0,0,0,0.957003479195758,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,1.07841812769083,4.01288823649394,0.468528891450678,0,0,0,0,1.20990716048664,1.53036380815245,3.53844845919533,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.587954384486266,0,1.04836000945218,0,0.0967563312890851,0,0,1.45483524732629,0,2.71176888936639,0.137041924646751,0,0.50648636764703,0,0.64127056201227,0.85381197895741,14.1864822803312,0.288180834308212,0.343609788497747,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.684526894459965,0,2.14882720709979,0,4.46851842035607,5.95817102430378,4.30723814746088,1.59743200399193,4.29226048136571,7.58782955302367,4.03100834920358,0,0,1.3393140992228,2.22522817629149,1.14586024552114,0.0984274815147488,0,0.795229689809303,0.681017030557878,0,0,0,0,3.0952078182318,0.485996453264197,1.67717343799633,1.10327990218877,0.209818352539992,0,0.717149357331379,0,4.2881719582402,4.63464379255802,0,0,0,0.979762080328227,0,0,0,0,1.46552233678082,2.65013777824443,0.646414781807753,0.39669780522807,0.171086837884329,1.40963004463334,1.60181118851542,4.40172054279065,0.828478110694391,0,0,0,0,7.61624924717264,7.7713867147037,5.82056595850577,9.50830629058433,0,0.886068179966986,0.854183854313742,0.250381861413,5.73409195690071,1.99672292766334,1.1177352529449,8.43926673111008,2.49960815924213,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |||
|TSSclassifier=S | |||
|UniProt=Q9NP74 | |||
|association_with_transcript=47bp_to_ENST00000263174_5end | |||
|coexpression_cluster_id=C2508 | |||
|description=CAGE_peak_3_at_PALMD_5end | |||
|id=chr1:100111546..100111567,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.83e-19!24;CL:0000115!3.55e-15!35;CL:0000071!1.35e-14!18;CL:0002546!1.35e-14!18;CL:0002078!3.35e-12!44;CL:1000413!9.91e-09!9;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.66e-31;24!CL:0000115;2.22e-22;36!CL:0000071;2.37e-22;18!CL:1000413;3.54e-14;9!CL:0002078;3.57e-14;45!CL:0002138;5.61e-10;6!CL:0002544;7.96e-10;6!CL:0002543;3.54e-09;6!CL:0000213;4.01e-09;58!CL:0000215;4.01e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.72e-31,24;CL:0000115,6.94e-26,36;CL:0000071,1.77e-22,18;CL:0002546,1.77e-22,18;CL:0002078,1.51e-20,45;CL:1000413,3.30e-14,9;CL:0000213,7.08e-14,58;CL:0000215,7.08e-14,58;CL:0005020,3.60e-10,6;CL:0002138,3.60e-10,6;CL:0005022,3.60e-10,6;CL:0002544,8.35e-10,6;CL:0002543,1.90e-09,6;CL:0000222,7.28e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.37e-22;18!CL:0005022;5.61e-10;6!UBERON:0003104;4.74e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@PALMD | |||
}} |
Revision as of 23:06, 11 September 2013
Short description: | p3@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PALMD_5end |
Coexpression cluster: | C2508_mature_skeletal_left_Endothelial_adipose_heart_gastric |
Association with transcript: | 47bp_to_ENST00000263174_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.72e-31 | 24 |
endothelial cell | 6.94e-26 | 36 |
blood vessel endothelial cell | 1.77e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.77e-22 | 18 |
meso-epithelial cell | 1.51e-20 | 45 |
endothelial cell of artery | 3.30e-14 | 9 |
lining cell | 7.08e-14 | 58 |
barrier cell | 7.08e-14 | 58 |
lymphangioblast | 3.60e-10 | 6 |
endothelial cell of lymphatic vessel | 3.60e-10 | 6 |
vascular lymphangioblast | 3.60e-10 | 6 |
aortic endothelial cell | 8.35e-10 | 6 |
vein endothelial cell | 1.90e-09 | 6 |
mesodermal cell | 7.28e-08 | 121 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.