FFCP PHASE1:Hg19::chr1:109134776..109134796,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr1:109134776..109134796,-|id=chr1:109134776..109134796,-|ontology_enrichment_celltype=CL:0002057!1.86e-92!42;CL:0000860!1.38e-85!45;CL:0000766!3.84e-67!76;CL:0000738!3.09e-60!140;CL:0000839!2.30e-59!70;CL:0000557!2.19e-58!71;CL:0002194!4.87e-57!63;CL:0000576!4.87e-57!63;CL:0000040!4.87e-57!63;CL:0000559!4.87e-57!63;CL:0002009!5.43e-55!65;CL:0002087!5.77e-52!119;CL:0002031!2.96e-49!124;CL:0000037!2.47e-48!172;CL:0000566!2.47e-48!172;CL:0000988!6.40e-45!182;CL:0000763!5.17e-44!112;CL:0000049!5.17e-44!112;CL:0002032!3.79e-43!165;CL:0000837!3.79e-43!165;CL:0002393!2.37e-19!9;CL:0002397!2.37e-19!9;CL:0000134!8.46e-17!358;CL:0002320!3.32e-16!365;CL:0000219!4.08e-14!390;CL:0000034!5.74e-13!444;CL:0000048!2.63e-12!430;CL:0000723!6.09e-12!436;CL:0000767!1.07e-10!3;CL:0000623!1.18e-10!3;CL:0000825!1.18e-10!3;CL:0000842!3.51e-09!3;CL:0000224!5.58e-07!4|ontology_enrichment_celltype_v019=CL:0000860;2.58e-49;33!CL:0002057;2.58e-49;33!CL:0000576;1.34e-36;48!CL:0000473;7.79e-34;39!CL:0000234;7.79e-34;39!CL:0000766;1.88e-20;69!CL:0000767;1.29e-19;3!CL:0000623;1.56e-19;3!CL:0002393;1.06e-15;6!CL:0002397;1.06e-15;6!CL:0000094;1.56e-12;8!CL:0002087;2.45e-12;104!CL:0000738;5.29e-11;136!CL:0000763;1.19e-10;100!CL:0000081;3.85e-09;11|ontology_enrichment_celltype_v019_2=CL:0000860,8.32e-63,42;CL:0002057,8.32e-63,42;CL:0000473,2.15e-54,48;CL:0000234,2.15e-54,48;CL:0000766,1.94e-49,72;CL:0002194,1.30e-42,59;CL:0000576,1.30e-42,59;CL:0000040,1.30e-42,59;CL:0000559,1.30e-42,59;CL:0002009,4.31e-41,61;CL:0000738,1.03e-38,136;CL:0000839,1.10e-37,66;CL:0000557,4.58e-37,67;CL:0002087,1.68e-34,115;CL:0000763,2.06e-31,108;CL:0000049,2.06e-31,108;CL:0000037,2.62e-30,168;CL:0002031,2.71e-30,120;CL:0002032,1.27e-29,161;CL:0000837,1.27e-29,161;CL:0000988,1.74e-28,177;CL:0000767,1.30e-19,3;CL:0000623,1.56e-19,3;CL:0000825,1.56e-19,3;CL:0000094,1.53e-12,8;CL:0000134,2.36e-11,354;CL:0002320,5.11e-11,361;CL:0002393,1.77e-10,9;CL:0002397,1.77e-10,9;CL:0000219,7.82e-10,386;CL:0000081,3.81e-09,11;CL:0000034,8.78e-09,441;CL:0000048,2.21e-08,427;CL:0000723,3.51e-08,433|ontology_enrichment_development_v019=CL:0002057;1.29e-42;42!CL:0000049;3.28e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.16e-50!80;UBERON:0001474!2.11e-46!86;UBERON:0002390!2.23e-46!102;UBERON:0003061!2.23e-46!102;UBERON:0002193!3.17e-41!112;UBERON:0004765!5.95e-38!101;UBERON:0001434!5.95e-38!101;UBERON:0002405!1.11e-35!115;UBERON:0002204!6.05e-20!167;UBERON:0002384!3.28e-16!375;UBERON:0003081!6.21e-16!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-32,76;UBERON:0001474,1.52e-29,82;UBERON:0004765,1.52e-26,90;UBERON:0002390,1.64e-26,98;UBERON:0003061,1.64e-26,98;UBERON:0002405,1.49e-25,93;UBERON:0002193,1.21e-23,108;UBERON:0001434,1.83e-23,100;UBERON:0002204,2.76e-12,167;UBERON:0002384,1.47e-10,371;UBERON:0003081,1.99e-10,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3412067971073,10.747223146722,6.50227717927519,0,0,0,0,0,0,3.32397245119126,1.20326668482085,1.73608696572681,0,0,0,1.30858414901608,0.377875943688809,2.42584061187816,1.16214518452842,0.822335776043652,1.54853185447552,0.863077176966451,0.768482119587302,5.20260905754887,0.344745680736619,1.93645405075148,2.70852973188684,1.69418105588344,1.36453075028923,2.69668181334102,3.06083892370903,3.85114832491312,3.83602275479425,0.329851300186716,0.997318288108159,1.27867425159808,0.870627715885752,0,0.622822248995575,2.00998932205395,1.0429658368404,5.64690996233303,0,0,2.84816148696796,0.422510572623884,0.212604299965044,1.04829322754188,0.112328631146495,0.600707571366025,0.48217676009124,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.80254281490768,0.263384084775077,0.393419540227666,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,2.62088766192152,2.13952156626806,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27529192848094,7.97822026980214,8.59898343074314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr1:109134776..109134796,- | |||
|id=chr1:109134776..109134796,- | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-92!42;CL:0000860!1.38e-85!45;CL:0000766!3.84e-67!76;CL:0000738!3.09e-60!140;CL:0000839!2.30e-59!70;CL:0000557!2.19e-58!71;CL:0002194!4.87e-57!63;CL:0000576!4.87e-57!63;CL:0000040!4.87e-57!63;CL:0000559!4.87e-57!63;CL:0002009!5.43e-55!65;CL:0002087!5.77e-52!119;CL:0002031!2.96e-49!124;CL:0000037!2.47e-48!172;CL:0000566!2.47e-48!172;CL:0000988!6.40e-45!182;CL:0000763!5.17e-44!112;CL:0000049!5.17e-44!112;CL:0002032!3.79e-43!165;CL:0000837!3.79e-43!165;CL:0002393!2.37e-19!9;CL:0002397!2.37e-19!9;CL:0000134!8.46e-17!358;CL:0002320!3.32e-16!365;CL:0000219!4.08e-14!390;CL:0000034!5.74e-13!444;CL:0000048!2.63e-12!430;CL:0000723!6.09e-12!436;CL:0000767!1.07e-10!3;CL:0000623!1.18e-10!3;CL:0000825!1.18e-10!3;CL:0000842!3.51e-09!3;CL:0000224!5.58e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.58e-49;33!CL:0002057;2.58e-49;33!CL:0000576;1.34e-36;48!CL:0000473;7.79e-34;39!CL:0000234;7.79e-34;39!CL:0000766;1.88e-20;69!CL:0000767;1.29e-19;3!CL:0000623;1.56e-19;3!CL:0002393;1.06e-15;6!CL:0002397;1.06e-15;6!CL:0000094;1.56e-12;8!CL:0002087;2.45e-12;104!CL:0000738;5.29e-11;136!CL:0000763;1.19e-10;100!CL:0000081;3.85e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.32e-63,42;CL:0002057,8.32e-63,42;CL:0000473,2.15e-54,48;CL:0000234,2.15e-54,48;CL:0000766,1.94e-49,72;CL:0002194,1.30e-42,59;CL:0000576,1.30e-42,59;CL:0000040,1.30e-42,59;CL:0000559,1.30e-42,59;CL:0002009,4.31e-41,61;CL:0000738,1.03e-38,136;CL:0000839,1.10e-37,66;CL:0000557,4.58e-37,67;CL:0002087,1.68e-34,115;CL:0000763,2.06e-31,108;CL:0000049,2.06e-31,108;CL:0000037,2.62e-30,168;CL:0002031,2.71e-30,120;CL:0002032,1.27e-29,161;CL:0000837,1.27e-29,161;CL:0000988,1.74e-28,177;CL:0000767,1.30e-19,3;CL:0000623,1.56e-19,3;CL:0000825,1.56e-19,3;CL:0000094,1.53e-12,8;CL:0000134,2.36e-11,354;CL:0002320,5.11e-11,361;CL:0002393,1.77e-10,9;CL:0002397,1.77e-10,9;CL:0000219,7.82e-10,386;CL:0000081,3.81e-09,11;CL:0000034,8.78e-09,441;CL:0000048,2.21e-08,427;CL:0000723,3.51e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-42;42!CL:0000049;3.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.16e-50!80;UBERON:0001474!2.11e-46!86;UBERON:0002390!2.23e-46!102;UBERON:0003061!2.23e-46!102;UBERON:0002193!3.17e-41!112;UBERON:0004765!5.95e-38!101;UBERON:0001434!5.95e-38!101;UBERON:0002405!1.11e-35!115;UBERON:0002204!6.05e-20!167;UBERON:0002384!3.28e-16!375;UBERON:0003081!6.21e-16!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-32,76;UBERON:0001474,1.52e-29,82;UBERON:0004765,1.52e-26,90;UBERON:0002390,1.64e-26,98;UBERON:0003061,1.64e-26,98;UBERON:0002405,1.49e-25,93;UBERON:0002193,1.21e-23,108;UBERON:0001434,1.83e-23,100;UBERON:0002204,2.76e-12,167;UBERON:0002384,1.47e-10,371;UBERON:0003081,1.99e-10,203 | |||
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|short_description=p@chr1:109134776..109134796,- | |||
}} |
Revision as of 23:17, 11 September 2013
Short description: | p@chr1:109134776..109134796, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:109134776..109134796, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-32 | 76 |
bone element | 1.52e-29 | 82 |
skeletal element | 1.52e-26 | 90 |
hematopoietic system | 1.64e-26 | 98 |
blood island | 1.64e-26 | 98 |
immune system | 1.49e-25 | 93 |
hemolymphoid system | 1.21e-23 | 108 |
skeletal system | 1.83e-23 | 100 |
musculoskeletal system | 2.76e-12 | 167 |
connective tissue | 1.47e-10 | 371 |
lateral plate mesoderm | 1.99e-10 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.