FFCP PHASE1:Hg19::chr1:181057688..181057692,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51278|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5393|TSSclassifier=S|UniProt=Q5VY09|association_with_transcript=50bp_to_ENST00000367577,NM_016545,uc001got.3_5end|description=CAGE_peak_2_at_IER5_5end|id=chr1:181057688..181057692,+|ontology_enrichment_celltype=CL:0000860!2.48e-28!45;CL:0002057!3.68e-28!42;CL:0000557!1.04e-24!71;CL:0002009!3.38e-21!65;CL:0000839!5.07e-21!70;CL:0000766!7.85e-19!76;CL:0002194!4.80e-18!63;CL:0000576!4.80e-18!63;CL:0000040!4.80e-18!63;CL:0000559!4.80e-18!63;CL:0002031!1.14e-16!124;CL:0000738!5.64e-16!140;CL:0000763!3.81e-14!112;CL:0000049!3.81e-14!112;CL:0002087!1.80e-12!119;CL:0002032!3.14e-12!165;CL:0000837!3.14e-12!165;CL:0000037!2.20e-11!172;CL:0000566!2.20e-11!172;CL:0000988!2.71e-10!182;CL:0001014!1.84e-07!2;CL:0001016!1.84e-07!2|ontology_enrichment_celltype_v019=CL:0000097;3.84e-14;5!CL:0001014;9.46e-10;2!CL:0001016;9.46e-10;2!CL:0000860;2.20e-08;33!CL:0002057;2.20e-08;33!CL:0000163;2.85e-08;9|ontology_enrichment_celltype_v019_2=CL:0000097,4.11e-14,5;CL:0002028,4.11e-14,5;CL:0000557,1.65e-11,67;CL:0001014,9.46e-10,2;CL:0001016,9.46e-10,2;CL:0000839,1.18e-08,66;CL:0000163,2.96e-08,9;CL:0000766,6.35e-08,72;CL:0000763,5.19e-07,108;CL:0000049,5.19e-07,108|ontology_enrichment_development_v019=UBERON:0004872;2.24e-10;7!UBERON:0006965;1.44e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.20e-21!80;UBERON:0001474!4.03e-19!86;UBERON:0002390!6.75e-18!102;UBERON:0003061!6.75e-18!102;UBERON:0002405!1.38e-17!115;UBERON:0002193!7.19e-17!112;UBERON:0004765!3.31e-15!101;UBERON:0001434!3.31e-15!101;UBERON:0003081!1.21e-07!216;UBERON:0002204!3.35e-07!167;UBERON:0007023!6.60e-07!115|ontology_enrichment_uberon_v019=UBERON:0002135;8.72e-18;1!UBERON:0002133;1.44e-09;2!UBERON:0002106;8.62e-07;3!UBERON:0003978;8.62e-07;3!UBERON:0000946;8.62e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.37e-18,1;UBERON:0002405,1.10e-10,93;UBERON:0002371,4.08e-10,76;UBERON:0002390,4.09e-10,98;UBERON:0003061,4.09e-10,98;UBERON:0002133,1.33e-09,2;UBERON:0001474,2.36e-09,82;UBERON:0002193,3.94e-09,108;UBERON:0004765,1.72e-08,90;UBERON:0001434,1.32e-07,100;UBERON:0003081,3.03e-07,203;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3;UBERON:0003978,8.15e-07,3;UBERON:0009751,8.15e-07,3;UBERON:0000946,8.15e-07,3;UBERON:0002523,8.15e-07,3;UBERON:0005983,8.15e-07,3;UBERON:0002165,8.15e-07,3;UBERON:0002062,8.15e-07,3;UBERON:0007280,8.15e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,1.23882548358041,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,1.91801137739712,0,0.598390972864896,1.27867425159808,0,0.56738522469114,1.24564449799115,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.288239906833923,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,1.39641200636127,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,2.32140586367385,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51278 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5393 | |||
|TSSclassifier=S | |||
|UniProt=Q5VY09 | |||
|association_with_transcript=50bp_to_ENST00000367577,NM_016545,uc001got.3_5end | |||
|description=CAGE_peak_2_at_IER5_5end | |||
|id=chr1:181057688..181057692,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.48e-28!45;CL:0002057!3.68e-28!42;CL:0000557!1.04e-24!71;CL:0002009!3.38e-21!65;CL:0000839!5.07e-21!70;CL:0000766!7.85e-19!76;CL:0002194!4.80e-18!63;CL:0000576!4.80e-18!63;CL:0000040!4.80e-18!63;CL:0000559!4.80e-18!63;CL:0002031!1.14e-16!124;CL:0000738!5.64e-16!140;CL:0000763!3.81e-14!112;CL:0000049!3.81e-14!112;CL:0002087!1.80e-12!119;CL:0002032!3.14e-12!165;CL:0000837!3.14e-12!165;CL:0000037!2.20e-11!172;CL:0000566!2.20e-11!172;CL:0000988!2.71e-10!182;CL:0001014!1.84e-07!2;CL:0001016!1.84e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.84e-14;5!CL:0001014;9.46e-10;2!CL:0001016;9.46e-10;2!CL:0000860;2.20e-08;33!CL:0002057;2.20e-08;33!CL:0000163;2.85e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.11e-14,5;CL:0002028,4.11e-14,5;CL:0000557,1.65e-11,67;CL:0001014,9.46e-10,2;CL:0001016,9.46e-10,2;CL:0000839,1.18e-08,66;CL:0000163,2.96e-08,9;CL:0000766,6.35e-08,72;CL:0000763,5.19e-07,108;CL:0000049,5.19e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.24e-10;7!UBERON:0006965;1.44e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.20e-21!80;UBERON:0001474!4.03e-19!86;UBERON:0002390!6.75e-18!102;UBERON:0003061!6.75e-18!102;UBERON:0002405!1.38e-17!115;UBERON:0002193!7.19e-17!112;UBERON:0004765!3.31e-15!101;UBERON:0001434!3.31e-15!101;UBERON:0003081!1.21e-07!216;UBERON:0002204!3.35e-07!167;UBERON:0007023!6.60e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;8.72e-18;1!UBERON:0002133;1.44e-09;2!UBERON:0002106;8.62e-07;3!UBERON:0003978;8.62e-07;3!UBERON:0000946;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.37e-18,1;UBERON:0002405,1.10e-10,93;UBERON:0002371,4.08e-10,76;UBERON:0002390,4.09e-10,98;UBERON:0003061,4.09e-10,98;UBERON:0002133,1.33e-09,2;UBERON:0001474,2.36e-09,82;UBERON:0002193,3.94e-09,108;UBERON:0004765,1.72e-08,90;UBERON:0001434,1.32e-07,100;UBERON:0003081,3.03e-07,203;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3;UBERON:0003978,8.15e-07,3;UBERON:0009751,8.15e-07,3;UBERON:0000946,8.15e-07,3;UBERON:0002523,8.15e-07,3;UBERON:0005983,8.15e-07,3;UBERON:0002165,8.15e-07,3;UBERON:0002062,8.15e-07,3;UBERON:0007280,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,1.23882548358041,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,1.91801137739712,0,0.598390972864896,1.27867425159808,0,0.56738522469114,1.24564449799115,0.75374599577023,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.288239906833923,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,1.19548792950642,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,1.39641200636127,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,2.32140586367385,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,1.54698931136585,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0.806971285846153,0,0.0636471582781649,0,0,0,0.202056159043763,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@IER5 | |||
}} |
Revision as of 02:05, 12 September 2013
Short description: | p2@IER5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IER5_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000367577, NM_016545, uc001got.3_5end |
EntrezGene: | IER5 |
HGNC: | 5393 |
UniProt: | Q5VY09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.11e-14 | 5 |
basophil mast progenitor cell | 4.11e-14 | 5 |
granulocyte monocyte progenitor cell | 1.65e-11 | 67 |
CD1a-positive Langerhans cell | 9.46e-10 | 2 |
immature CD1a-positive Langerhans cell | 9.46e-10 | 2 |
myeloid lineage restricted progenitor cell | 1.18e-08 | 66 |
endocrine cell | 2.96e-08 | 9 |
myeloid leukocyte | 6.35e-08 | 72 |
myeloid cell | 5.19e-07 | 108 |
common myeloid progenitor | 5.19e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 7.37e-18 | 1 |
immune system | 1.10e-10 | 93 |
bone marrow | 4.08e-10 | 76 |
hematopoietic system | 4.09e-10 | 98 |
blood island | 4.09e-10 | 98 |
atrioventricular valve | 1.33e-09 | 2 |
bone element | 2.36e-09 | 82 |
hemolymphoid system | 3.94e-09 | 108 |
skeletal element | 1.72e-08 | 90 |
skeletal system | 1.32e-07 | 100 |
lateral plate mesoderm | 3.03e-07 | 203 |
spleen | 7.70e-07 | 3 |
gastrointestinal system mesentery | 7.70e-07 | 3 |
stomach region | 7.70e-07 | 3 |
mesentery | 7.70e-07 | 3 |
gastrointestinal system serosa | 7.70e-07 | 3 |
mesentery of stomach | 7.70e-07 | 3 |
gut mesentery | 7.70e-07 | 3 |
dorsal mesentery | 7.70e-07 | 3 |
dorsal mesogastrium | 7.70e-07 | 3 |
peritoneal cavity | 7.70e-07 | 3 |
spleen primordium | 7.70e-07 | 3 |
valve | 8.15e-07 | 3 |
cardiac mesenchyme | 8.15e-07 | 3 |
cardial valve | 8.15e-07 | 3 |
tunica intima | 8.15e-07 | 3 |
heart layer | 8.15e-07 | 3 |
endocardium | 8.15e-07 | 3 |
endocardial cushion | 8.15e-07 | 3 |
presumptive endocardium | 8.15e-07 | 3 |
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