FFCP PHASE1:Hg19::chr1:27992626..27992630,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C296|description=CAGE_peak_at_chr1:27992626..27992630,-|id=chr1:27992626..27992630,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000415;1.82e-11;2!CL:0002097;3.34e-11;2!CL:0000174;6.78e-08;3!CL:0002541;6.78e-08;3|ontology_enrichment_celltype_v019_2=CL:1000415,1.82e-11,2;CL:0002097,2.73e-11,2;CL:0000174,5.93e-08,3;CL:0002541,8.29e-08,3|ontology_enrichment_development_v019=UBERON:0005425;2.08e-21;1!UBERON:0003056;5.01e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;5.16e-21;1!DOID:0070004;5.16e-21;1|ontology_enrichment_disease_v019_2=DOID:4960,4.22e-21,1;DOID:0070004,4.22e-21,1|ontology_enrichment_uberon=UBERON:0007023!1.35e-08!115|ontology_enrichment_uberon_v019=UBERON:0000941;2.08e-21;1!UBERON:0001785;2.08e-21;1!UBERON:0002464;2.08e-21;1!UBERON:0004904;2.08e-21;1!UBERON:0001021;2.08e-21;1!UBERON:0001905;2.12e-11;2!UBERON:0003714;2.12e-11;2!UBERON:0005162;2.12e-11;2!UBERON:0000122;2.12e-11;2!UBERON:0002757;2.12e-11;2!UBERON:0010134;2.12e-11;2!UBERON:0005408;2.12e-11;2!UBERON:0001899;2.12e-11;2!UBERON:0002110;4.52e-08;3!UBERON:0002369;6.78e-08;3!UBERON:0001235;6.78e-08;3!UBERON:0006858;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.88e-21,1;UBERON:0001785,1.88e-21,1;UBERON:0002464,1.88e-21,1;UBERON:0004904,1.88e-21,1;UBERON:0001021,1.88e-21,1;UBERON:0003902,1.88e-21,1;UBERON:0005425,1.88e-21,1;UBERON:0003714,2.02e-11,2;UBERON:0005162,2.02e-11,2;UBERON:0000122,2.02e-11,2;UBERON:0001905,2.23e-11,2;UBERON:0002757,2.23e-11,2;UBERON:0010134,2.23e-11,2;UBERON:0005408,2.23e-11,2;UBERON:0001899,2.23e-11,2;UBERON:0002110,4.52e-08,3;UBERON:0006242,4.52e-08,3;UBERON:0002369,5.93e-08,3;UBERON:0001235,5.93e-08,3;UBERON:0006858,5.93e-08,3;UBERON:0000920,8.29e-08,3|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23213432070436,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0.994147647766298,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0.434589487688032,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0,0.176512253383001,0,0,0,0,10.1686719022098,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0.633602019116439,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,1.71553273099941,0.26099429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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_at_chr1:27992626..27992630,- | |||
|id=chr1:27992626..27992630,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.82e-11;2!CL:0002097;3.34e-11;2!CL:0000174;6.78e-08;3!CL:0002541;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.82e-11,2;CL:0002097,2.73e-11,2;CL:0000174,5.93e-08,3;CL:0002541,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.08e-21;1!UBERON:0003056;5.01e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.16e-21;1!DOID:0070004;5.16e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.22e-21,1;DOID:0070004,4.22e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.08e-21;1!UBERON:0001785;2.08e-21;1!UBERON:0002464;2.08e-21;1!UBERON:0004904;2.08e-21;1!UBERON:0001021;2.08e-21;1!UBERON:0001905;2.12e-11;2!UBERON:0003714;2.12e-11;2!UBERON:0005162;2.12e-11;2!UBERON:0000122;2.12e-11;2!UBERON:0002757;2.12e-11;2!UBERON:0010134;2.12e-11;2!UBERON:0005408;2.12e-11;2!UBERON:0001899;2.12e-11;2!UBERON:0002110;4.52e-08;3!UBERON:0002369;6.78e-08;3!UBERON:0001235;6.78e-08;3!UBERON:0006858;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.88e-21,1;UBERON:0001785,1.88e-21,1;UBERON:0002464,1.88e-21,1;UBERON:0004904,1.88e-21,1;UBERON:0001021,1.88e-21,1;UBERON:0003902,1.88e-21,1;UBERON:0005425,1.88e-21,1;UBERON:0003714,2.02e-11,2;UBERON:0005162,2.02e-11,2;UBERON:0000122,2.02e-11,2;UBERON:0001905,2.23e-11,2;UBERON:0002757,2.23e-11,2;UBERON:0010134,2.23e-11,2;UBERON:0005408,2.23e-11,2;UBERON:0001899,2.23e-11,2;UBERON:0002110,4.52e-08,3;UBERON:0006242,4.52e-08,3;UBERON:0002369,5.93e-08,3;UBERON:0001235,5.93e-08,3;UBERON:0006858,5.93e-08,3;UBERON:0000920,8.29e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23213432070436,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.614321404198464,0.994147647766298,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0.434589487688032,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0,0.176512253383001,0,0,0,0,10.1686719022098,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0.633602019116439,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,1.71553273099941,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0.655219697692825,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0,0.40341013740704,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,2.35398605553177,0,0.455324382702595,0.266107110487916,0.230467975111559,0,0,0.0657727735628491,0.118193840883968,0,0.156986185701028,0.157115589916002,0.560544326627578,0,0,1.9110067515482,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.187967835959707,0,0,0.357107877211315,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:27992626..27992630,- | |||
}} |
Revision as of 05:05, 12 September 2013
Short description: | p@chr1:27992626..27992630, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:27992626..27992630, - |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.82e-11 | 2 |
cortical cell of adrenal gland | 2.73e-11 | 2 |
steroid hormone secreting cell | 5.93e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.88e-21 | 1 |
cranial nerve | 1.88e-21 | 1 |
nerve trunk | 1.88e-21 | 1 |
nerve connecting eye with brain | 1.88e-21 | 1 |
nerve | 1.88e-21 | 1 |
retinal neural layer | 1.88e-21 | 1 |
presumptive neural retina | 1.88e-21 | 1 |
neural tissue | 2.02e-11 | 2 |
multi cell component structure | 2.02e-11 | 2 |
neuron projection bundle | 2.02e-11 | 2 |
pineal body | 2.23e-11 | 2 |
regional part of epithalamus | 2.23e-11 | 2 |
secretory circumventricular organ | 2.23e-11 | 2 |
circumventricular organ | 2.23e-11 | 2 |
epithalamus | 2.23e-11 | 2 |
gallbladder | 4.52e-08 | 3 |
gall bladder primordium | 4.52e-08 | 3 |
adrenal gland | 5.93e-08 | 3 |
adrenal cortex | 5.93e-08 | 3 |
adrenal/interrenal gland | 5.93e-08 | 3 |
egg chorion | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.22e-21 | 1 |
myeloma | 4.22e-21 | 1 |
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