FFCP PHASE1:Hg19::chr1:76818203..76818207,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:76818203..76818207,+|id=chr1:76818203..76818207,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002618;1.18e-22;3!CL:0000236;3.61e-14;13!CL:0002543;1.27e-11;6!CL:0000945;1.37e-07;24|ontology_enrichment_celltype_v019_2=CL:0002618,2.32e-22,3;CL:0000236,2.95e-13,14;CL:0002543,1.77e-11,6;CL:0000945,1.19e-07,24;CL:0000826,1.19e-07,24|ontology_enrichment_development_v019=UBERON:0000358;3.86e-09;1!UBERON:0005425;3.86e-09;1!UBERON:0004874;1.05e-08;1!UBERON:0005062;1.65e-08;4!UBERON:0007284;1.65e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.37e-25!115;UBERON:0000073!1.16e-18!94;UBERON:0001016!1.16e-18!94;UBERON:0002346!8.00e-18!90;UBERON:0005743!1.17e-17!86;UBERON:0003075!1.17e-17!86;UBERON:0007284!1.17e-17!86;UBERON:0001017!1.40e-17!82;UBERON:0001049!1.74e-17!57;UBERON:0005068!1.74e-17!57;UBERON:0006241!1.74e-17!57;UBERON:0007135!1.74e-17!57;UBERON:0002020!3.31e-13!34;UBERON:0003528!3.31e-13!34;UBERON:0002616!3.51e-13!59;UBERON:0001893!5.00e-13!34;UBERON:0000955!1.14e-12!69;UBERON:0006238!1.14e-12!69;UBERON:0002780!1.19e-12!41;UBERON:0001890!1.19e-12!41;UBERON:0006240!1.19e-12!41;UBERON:0002791!2.54e-12!33;UBERON:0003080!3.96e-12!42;UBERON:0003056!1.68e-11!61;UBERON:0001869!1.76e-11!32;UBERON:0000924!2.56e-11!173;UBERON:0006601!2.56e-11!173;UBERON:0004121!5.16e-11!169;UBERON:0002619!1.15e-08!22;UBERON:0000153!1.19e-08!129;UBERON:0007811!1.19e-08!129;UBERON:0000956!7.11e-08!25;UBERON:0000203!7.11e-08!25;UBERON:0000033!8.97e-08!123;UBERON:0002308!1.66e-07!9;UBERON:0000125!1.66e-07!9;UBERON:0001950!3.75e-07!20;UBERON:0002298!8.15e-07!8;UBERON:0003076!9.33e-07!15;UBERON:0003057!9.33e-07!15|ontology_enrichment_uberon_v019=UBERON:0002066;7.75e-14;5!UBERON:0003978;4.64e-11;3!UBERON:0000946;4.64e-11;3!UBERON:0002134;3.86e-09;1!UBERON:0000941;3.86e-09;1!UBERON:0001785;3.86e-09;1!UBERON:0002464;3.86e-09;1!UBERON:0004904;3.86e-09;1!UBERON:0001021;3.86e-09;1!UBERON:0005208;3.86e-09;1!UBERON:0004145;3.86e-09;1!UBERON:0005946;3.86e-09;1!UBERON:0005965;3.86e-09;1!UBERON:0002078;3.86e-09;1!UBERON:0002038;1.05e-08;1!UBERON:0000989;1.05e-08;1!UBERON:0002146;1.05e-08;1!UBERON:0008811;1.05e-08;1!UBERON:0002426;1.05e-08;1!UBERON:0003831;1.05e-08;1!UBERON:0003898;1.05e-08;1!UBERON:0004830;1.05e-08;1!UBERON:0009661;1.05e-08;1!UBERON:0005623;1.05e-08;1!UBERON:0002950;1.05e-08;1!UBERON:0003830;1.05e-08;1!UBERON:0005175;1.05e-08;1!UBERON:0001774;1.05e-08;1!UBERON:0001103;1.05e-08;1!UBERON:0001891;1.05e-08;1!UBERON:0001638;6.52e-08;9!UBERON:0010260;6.52e-08;9!UBERON:0003920;6.52e-08;9!UBERON:0004582;6.52e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0002066,1.16e-13,5;UBERON:0003978,5.98e-11,3;UBERON:0009751,5.98e-11,3;UBERON:0000946,5.98e-11,3;UBERON:0002523,5.98e-11,3;UBERON:0005983,5.98e-11,3;UBERON:0002165,5.98e-11,3;UBERON:0002062,5.98e-11,3;UBERON:0007280,5.98e-11,3;UBERON:0002134,3.31e-09,1;UBERON:0005208,3.31e-09,1;UBERON:0005946,3.31e-09,1;UBERON:0005965,3.31e-09,1;UBERON:0002078,3.31e-09,1;UBERON:0000941,3.58e-09,1;UBERON:0001785,3.58e-09,1;UBERON:0002464,3.58e-09,1;UBERON:0004904,3.58e-09,1;UBERON:0001021,3.58e-09,1;UBERON:0003902,3.58e-09,1;UBERON:0005425,3.58e-09,1;UBERON:0002426,7.75e-09,1;UBERON:0003831,7.75e-09,1;UBERON:0003898,7.75e-09,1;UBERON:0004830,7.75e-09,1;UBERON:0003830,7.75e-09,1;UBERON:0005175,7.75e-09,1;UBERON:0001774,7.75e-09,1;UBERON:0001103,7.75e-09,1;UBERON:0010084,7.75e-09,1;UBERON:0002038,8.36e-09,1;UBERON:0009661,8.36e-09,1;UBERON:0002950,8.36e-09,1;UBERON:0001891,8.36e-09,1;UBERON:0009616,8.36e-09,1;UBERON:0010286,8.36e-09,1;UBERON:0000989,9.02e-09,1;UBERON:0008811,9.02e-09,1;UBERON:0006258,9.02e-09,1;UBERON:0005876,9.02e-09,1;UBERON:0004874,9.02e-09,1;UBERON:0002146,1.78e-08,1;UBERON:0005623,1.78e-08,1;UBERON:0001638,8.10e-08,9;UBERON:0010260,8.10e-08,9;UBERON:0003920,8.10e-08,9;UBERON:0004582,8.10e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0.419317291016752,0.112328631146495,0.150176892841506,0.48217676009124,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,1.77901850772711,1.70692089026603,0,0.574752439954483,0,0.954053754535364,2.27685187643779,1.76171156811282,0.764546456250458,0,0,0,0.393419540227666,0,0,0,0,0.473447805734733,1.94826728407911,0,0.294605907474837,0.221533894583621,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:76818203..76818207,+ | |||
|id=chr1:76818203..76818207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002618;1.18e-22;3!CL:0000236;3.61e-14;13!CL:0002543;1.27e-11;6!CL:0000945;1.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,2.32e-22,3;CL:0000236,2.95e-13,14;CL:0002543,1.77e-11,6;CL:0000945,1.19e-07,24;CL:0000826,1.19e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.86e-09;1!UBERON:0005425;3.86e-09;1!UBERON:0004874;1.05e-08;1!UBERON:0005062;1.65e-08;4!UBERON:0007284;1.65e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002066;7.75e-14;5!UBERON:0003978;4.64e-11;3!UBERON:0000946;4.64e-11;3!UBERON:0002134;3.86e-09;1!UBERON:0000941;3.86e-09;1!UBERON:0001785;3.86e-09;1!UBERON:0002464;3.86e-09;1!UBERON:0004904;3.86e-09;1!UBERON:0001021;3.86e-09;1!UBERON:0005208;3.86e-09;1!UBERON:0004145;3.86e-09;1!UBERON:0005946;3.86e-09;1!UBERON:0005965;3.86e-09;1!UBERON:0002078;3.86e-09;1!UBERON:0002038;1.05e-08;1!UBERON:0000989;1.05e-08;1!UBERON:0002146;1.05e-08;1!UBERON:0008811;1.05e-08;1!UBERON:0002426;1.05e-08;1!UBERON:0003831;1.05e-08;1!UBERON:0003898;1.05e-08;1!UBERON:0004830;1.05e-08;1!UBERON:0009661;1.05e-08;1!UBERON:0005623;1.05e-08;1!UBERON:0002950;1.05e-08;1!UBERON:0003830;1.05e-08;1!UBERON:0005175;1.05e-08;1!UBERON:0001774;1.05e-08;1!UBERON:0001103;1.05e-08;1!UBERON:0001891;1.05e-08;1!UBERON:0001638;6.52e-08;9!UBERON:0010260;6.52e-08;9!UBERON:0003920;6.52e-08;9!UBERON:0004582;6.52e-08;9 | |||
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| |||
|short_description=p@chr1:76818203..76818207,+ | |||
}} |
Revision as of 06:44, 12 September 2013
Short description: | p@chr1:76818203..76818207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:76818203..76818207, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 2.32e-22 | 3 |
B cell | 2.95e-13 | 14 |
vein endothelial cell | 1.77e-11 | 6 |
lymphocyte of B lineage | 1.19e-07 | 24 |
pro-B cell | 1.19e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.