FFCP PHASE1:Hg19::chr20:62610856..62610914,-: Difference between revisions
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{{FFCP | 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24835079,0.327796715891087,1.77377901416012,0.203977659483963,0.26721740526556,0.36757959813938,0,1.21245917149183,1.60778478093707,2.48750831837634,0.517164979309476,2.98527574661373,1.42838658878244,0.581300188524055,0.682821857254437,4.93380195354699,1.20929600728513,2.22328907854041,2.17716747896961,3.76456631193809,4.37788344594819,1.64961072403156,1.33064142618405,2.11648498388534,0.640364075266293,0,5.4793373285018,0,0.488965776731466,1.22068853494722,0.665756774185513,0.402547587182052,1.60284246151616|short_description=p1@SAMD10}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=140700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16129 | |||
|TSSclassifier=S | |||
|UniProt=Q9BYL1,Q5JWV3 | |||
|association_with_transcript=80bp_to_ENST00000369886,ENST00000450107,NM_080621,uc002yhm.2_5end | |||
|description=CAGE_peak_1_at_SAMD10_5end | |||
|id=chr20:62610856..62610914,- | |||
|ontology_enrichment_celltype=CL:0000066!3.75e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.17e-07;10!CL:1000494;5.17e-07;10!CL:1000449;9.24e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.61e-11,253;CL:1000507,7.12e-07,10;CL:1000494,7.12e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.56e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.66e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.46e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000477!8.04e-14!286;UBERON:0004111!1.56e-13!241;UBERON:0000064!1.59e-12!219;UBERON:0000481!4.43e-11!347;UBERON:0004119!1.03e-10!169;UBERON:0000925!1.03e-10!169;UBERON:0006595!1.03e-10!169;UBERON:0000025!1.80e-10!194;UBERON:0001007!3.59e-10!155;UBERON:0001555!3.59e-10!155;UBERON:0007026!3.59e-10!155;UBERON:0004921!6.79e-10!129;UBERON:0004185!6.79e-10!129;UBERON:0000077!1.98e-09!130;UBERON:0001041!1.49e-08!98;UBERON:0001049!9.86e-08!57;UBERON:0005068!9.86e-08!57;UBERON:0006241!9.86e-08!57;UBERON:0007135!9.86e-08!57;UBERON:0001869!2.13e-07!32;UBERON:0000058!5.63e-07!26;UBERON:0000483!7.15e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.17e-07;20!UBERON:0001869;4.01e-07;32!UBERON:0004211;5.17e-07;10!UBERON:0009773;5.17e-07;10!UBERON:0001231;5.17e-07;10!UBERON:0004810;5.17e-07;10!UBERON:0006555;9.24e-07;15!UBERON:0004819;9.24e-07;15!UBERON:0001285;9.24e-07;15!UBERON:0007684;9.24e-07;15!UBERON:0004921;9.36e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.30e-12,223;UBERON:0004111,1.54e-10,240;UBERON:0004921,9.24e-10,118;UBERON:0001007,1.25e-09,145;UBERON:0001555,1.25e-09,145;UBERON:0007026,1.25e-09,145;UBERON:0004119,1.46e-09,160;UBERON:0000925,1.46e-09,160;UBERON:0006595,1.46e-09,160;UBERON:0001041,1.04e-08,87;UBERON:0000025,2.32e-08,192;UBERON:0001869,1.66e-07,32;UBERON:0001950,4.94e-07,20;UBERON:0000073,6.93e-07,53;UBERON:0002616,6.93e-07,53;UBERON:0004810,7.12e-07,10;UBERON:0000072,9.89e-07,47 | |||
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| |||
|short_description=p1@SAMD10 | |||
}} |
Revision as of 09:39, 12 September 2013
Short description: | p1@SAMD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SAMD10_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000369886, ENST00000450107, NM_080621, uc002yhm.2_5end |
EntrezGene: | SAMD10 |
HGNC: | 16129 |
UniProt: | Q9BYL1Q5JWV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.61e-11 | 253 |
kidney tubule cell | 7.12e-07 | 10 |
nephron tubule epithelial cell | 7.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.30e-12 | 223 |
anatomical conduit | 1.54e-10 | 240 |
subdivision of digestive tract | 9.24e-10 | 118 |
digestive system | 1.25e-09 | 145 |
digestive tract | 1.25e-09 | 145 |
primitive gut | 1.25e-09 | 145 |
endoderm-derived structure | 1.46e-09 | 160 |
endoderm | 1.46e-09 | 160 |
presumptive endoderm | 1.46e-09 | 160 |
foregut | 1.04e-08 | 87 |
tube | 2.32e-08 | 192 |
cerebral hemisphere | 1.66e-07 | 32 |
neocortex | 4.94e-07 | 20 |
regional part of nervous system | 6.93e-07 | 53 |
regional part of brain | 6.93e-07 | 53 |
nephron tubule epithelium | 7.12e-07 | 10 |
segment of respiratory tract | 9.89e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.46e-09 | 106 |
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