FFCP PHASE1:Hg19::chr21:34638971..34638983,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100288432|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-406bp_to_ENST00000411998,NR_038974,uc002yrj.1_5end|coexpression_cluster_id=C6|description=CAGE_peak_2_at_LOC100288432_5end|id=chr21:34638971..34638983,-|ontology_enrichment_celltype=CL:0002057!2.65e-63!42;CL:0000738!1.48e-60!140;CL:0000860!2.29e-58!45;CL:0000766!5.66e-54!76;CL:0000037!1.64e-49!172;CL:0000566!1.64e-49!172;CL:0000988!1.63e-47!182;CL:0002087!2.48e-47!119;CL:0002031!2.67e-44!124;CL:0002032!6.11e-43!165;CL:0000837!6.11e-43!165;CL:0002009!1.66e-41!65;CL:0000557!1.72e-41!71;CL:0002194!2.21e-40!63;CL:0000576!2.21e-40!63;CL:0000040!2.21e-40!63;CL:0000559!2.21e-40!63;CL:0000839!1.26e-39!70;CL:0000763!3.59e-36!112;CL:0000049!3.59e-36!112;CL:0002393!1.02e-22!9;CL:0002397!1.02e-22!9;CL:0000134!5.37e-19!358;CL:0002320!2.72e-18!365;CL:0000094!4.48e-16!8;CL:0000219!8.16e-16!390;CL:0000081!2.31e-14!11;CL:0000048!1.48e-13!430;CL:0000034!2.54e-13!444;CL:0000723!4.00e-13!436;CL:0000767!7.78e-09!3;CL:0000842!8.19e-09!3;CL:0000063!1.40e-08!578;CL:0000875!3.14e-08!3;CL:0002396!3.14e-08!3;CL:0000838!2.49e-07!52;CL:0000542!3.99e-07!53;CL:0000051!3.99e-07!53;CL:0000080!4.57e-07!6;CL:0000084!5.93e-07!25;CL:0000827!5.93e-07!25;CL:0002371!6.27e-07!591;CL:0000791!8.99e-07!18;CL:0000789!8.99e-07!18;CL:0002420!8.99e-07!18;CL:0002419!8.99e-07!18;CL:0000790!8.99e-07!18|ontology_enrichment_celltype_v019=CL:0000094;1.28e-35;8!CL:0002393;1.64e-35;6!CL:0002397;1.64e-35;6!CL:0000081;1.11e-25;11!CL:0000766;3.12e-22;69!CL:0000576;1.76e-19;48!CL:0000767;2.89e-18;3!CL:0000226;3.34e-18;3!CL:0000842;3.34e-18;3!CL:0000860;9.84e-17;33!CL:0002057;9.84e-17;33!CL:0000771;2.91e-13;2!CL:0002087;2.28e-12;104!CL:0000473;6.97e-12;39!CL:0000234;6.97e-12;39!CL:0000763;7.29e-10;100!CL:0000738;5.52e-09;136!CL:0000775;7.33e-09;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.73e-44,72;CL:0000860,2.15e-40,42;CL:0002057,2.15e-40,42;CL:0000738,2.16e-37,136;CL:0000094,1.16e-35,8;CL:0000473,7.26e-35,48;CL:0000234,7.26e-35,48;CL:0002393,1.72e-31,9;CL:0002397,1.72e-31,9;CL:0000763,1.02e-30,108;CL:0000049,1.02e-30,108;CL:0002009,2.10e-29,61;CL:0000037,3.37e-29,168;CL:0000988,2.01e-27,177;CL:0002194,4.02e-27,59;CL:0000576,4.02e-27,59;CL:0000040,4.02e-27,59;CL:0000559,4.02e-27,59;CL:0000557,1.89e-26,67;CL:0000081,1.04e-25,11;CL:0002032,2.48e-24,161;CL:0000837,2.48e-24,161;CL:0000839,6.92e-24,66;CL:0002087,2.09e-23,115;CL:0000767,2.50e-18,3;CL:0000226,2.81e-18,3;CL:0000842,2.81e-18,3;CL:0002031,3.44e-18,120;CL:0000771,2.91e-13,2;CL:0000134,1.04e-11,354;CL:0002320,2.31e-11,361;CL:0000219,3.87e-10,386;CL:0000034,5.04e-09,441;CL:0000775,7.48e-09,3;CL:0000048,1.22e-08,427;CL:0000723,1.97e-08,433|ontology_enrichment_development_v019=CL:0002057;1.41e-27;42!CL:0000049;1.26e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.18e-37!80;UBERON:0002390!2.55e-36!102;UBERON:0003061!2.55e-36!102;UBERON:0001474!2.98e-34!86;UBERON:0002193!5.73e-32!112;UBERON:0004765!1.61e-27!101;UBERON:0001434!1.61e-27!101;UBERON:0002405!3.03e-24!115;UBERON:0002384!4.03e-18!375;UBERON:0002204!2.67e-13!167;UBERON:0003081!1.33e-11!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-23,98;UBERON:0003061,1.60e-23,98;UBERON:0002371,6.99e-23,76;UBERON:0002193,6.17e-21,108;UBERON:0001474,6.21e-21,82;UBERON:0004765,9.78e-19,90;UBERON:0002405,5.22e-18,93;UBERON:0001434,1.77e-16,100;UBERON:0002384,6.87e-11,371;UBERON:0003081,4.96e-09,203;UBERON:0002204,2.54e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,4.79929982279836,0,0,0,0,0,0.293600439334847,35.4557061460402,26.6724115135288,24.0882066494596,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,1.41889337933151,1.37898272294647,1.93645405075148,1.35426486594342,0.376484679085209,0,0.674170453335254,2.14258724659632,1.28371610830437,1.91801137739712,0,0.199463657621632,0,2.32167390902867,1.13477044938228,0.622822248995575,0.502497330513487,0,0.434377689410233,0.605399502633369,2.20966581592539,1.58231193720442,1.05627643155971,5.52771179909113,2.30624510059213,0.44931452458598,0.750884464207532,0.803627933485401,1.99508920618874,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,2.24203425192614,0,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4492584410489,15.511210565933,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100288432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-406bp_to_ENST00000411998,NR_038974,uc002yrj.1_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_2_at_LOC100288432_5end | |||
|id=chr21:34638971..34638983,- | |||
|ontology_enrichment_celltype=CL:0002057!2.65e-63!42;CL:0000738!1.48e-60!140;CL:0000860!2.29e-58!45;CL:0000766!5.66e-54!76;CL:0000037!1.64e-49!172;CL:0000566!1.64e-49!172;CL:0000988!1.63e-47!182;CL:0002087!2.48e-47!119;CL:0002031!2.67e-44!124;CL:0002032!6.11e-43!165;CL:0000837!6.11e-43!165;CL:0002009!1.66e-41!65;CL:0000557!1.72e-41!71;CL:0002194!2.21e-40!63;CL:0000576!2.21e-40!63;CL:0000040!2.21e-40!63;CL:0000559!2.21e-40!63;CL:0000839!1.26e-39!70;CL:0000763!3.59e-36!112;CL:0000049!3.59e-36!112;CL:0002393!1.02e-22!9;CL:0002397!1.02e-22!9;CL:0000134!5.37e-19!358;CL:0002320!2.72e-18!365;CL:0000094!4.48e-16!8;CL:0000219!8.16e-16!390;CL:0000081!2.31e-14!11;CL:0000048!1.48e-13!430;CL:0000034!2.54e-13!444;CL:0000723!4.00e-13!436;CL:0000767!7.78e-09!3;CL:0000842!8.19e-09!3;CL:0000063!1.40e-08!578;CL:0000875!3.14e-08!3;CL:0002396!3.14e-08!3;CL:0000838!2.49e-07!52;CL:0000542!3.99e-07!53;CL:0000051!3.99e-07!53;CL:0000080!4.57e-07!6;CL:0000084!5.93e-07!25;CL:0000827!5.93e-07!25;CL:0002371!6.27e-07!591;CL:0000791!8.99e-07!18;CL:0000789!8.99e-07!18;CL:0002420!8.99e-07!18;CL:0002419!8.99e-07!18;CL:0000790!8.99e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.28e-35;8!CL:0002393;1.64e-35;6!CL:0002397;1.64e-35;6!CL:0000081;1.11e-25;11!CL:0000766;3.12e-22;69!CL:0000576;1.76e-19;48!CL:0000767;2.89e-18;3!CL:0000226;3.34e-18;3!CL:0000842;3.34e-18;3!CL:0000860;9.84e-17;33!CL:0002057;9.84e-17;33!CL:0000771;2.91e-13;2!CL:0002087;2.28e-12;104!CL:0000473;6.97e-12;39!CL:0000234;6.97e-12;39!CL:0000763;7.29e-10;100!CL:0000738;5.52e-09;136!CL:0000775;7.33e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.73e-44,72;CL:0000860,2.15e-40,42;CL:0002057,2.15e-40,42;CL:0000738,2.16e-37,136;CL:0000094,1.16e-35,8;CL:0000473,7.26e-35,48;CL:0000234,7.26e-35,48;CL:0002393,1.72e-31,9;CL:0002397,1.72e-31,9;CL:0000763,1.02e-30,108;CL:0000049,1.02e-30,108;CL:0002009,2.10e-29,61;CL:0000037,3.37e-29,168;CL:0000988,2.01e-27,177;CL:0002194,4.02e-27,59;CL:0000576,4.02e-27,59;CL:0000040,4.02e-27,59;CL:0000559,4.02e-27,59;CL:0000557,1.89e-26,67;CL:0000081,1.04e-25,11;CL:0002032,2.48e-24,161;CL:0000837,2.48e-24,161;CL:0000839,6.92e-24,66;CL:0002087,2.09e-23,115;CL:0000767,2.50e-18,3;CL:0000226,2.81e-18,3;CL:0000842,2.81e-18,3;CL:0002031,3.44e-18,120;CL:0000771,2.91e-13,2;CL:0000134,1.04e-11,354;CL:0002320,2.31e-11,361;CL:0000219,3.87e-10,386;CL:0000034,5.04e-09,441;CL:0000775,7.48e-09,3;CL:0000048,1.22e-08,427;CL:0000723,1.97e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-27;42!CL:0000049;1.26e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-37!80;UBERON:0002390!2.55e-36!102;UBERON:0003061!2.55e-36!102;UBERON:0001474!2.98e-34!86;UBERON:0002193!5.73e-32!112;UBERON:0004765!1.61e-27!101;UBERON:0001434!1.61e-27!101;UBERON:0002405!3.03e-24!115;UBERON:0002384!4.03e-18!375;UBERON:0002204!2.67e-13!167;UBERON:0003081!1.33e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-23,98;UBERON:0003061,1.60e-23,98;UBERON:0002371,6.99e-23,76;UBERON:0002193,6.17e-21,108;UBERON:0001474,6.21e-21,82;UBERON:0004765,9.78e-19,90;UBERON:0002405,5.22e-18,93;UBERON:0001434,1.77e-16,100;UBERON:0002384,6.87e-11,371;UBERON:0003081,4.96e-09,203;UBERON:0002204,2.54e-08,167 | |||
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|short_description=p2@LOC100288432 | |||
}} |
Revision as of 10:08, 12 September 2013
Short description: | p2@LOC100288432 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100288432_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -406bp_to_ENST00000411998, NR_038974, uc002yrj.1_5end |
EntrezGene: | LOC100288432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-23 | 98 |
blood island | 1.60e-23 | 98 |
bone marrow | 6.99e-23 | 76 |
hemolymphoid system | 6.17e-21 | 108 |
bone element | 6.21e-21 | 82 |
skeletal element | 9.78e-19 | 90 |
immune system | 5.22e-18 | 93 |
skeletal system | 1.77e-16 | 100 |
connective tissue | 6.87e-11 | 371 |
lateral plate mesoderm | 4.96e-09 | 203 |
musculoskeletal system | 2.54e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.