FFCP PHASE1:Hg19::chr22:44421709..44421728,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29780|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=14653|TSSclassifier=W|UniProt=Q9HBI1|association_with_transcript=-455bp_to_NM_001243386,uc010gzn.2_5end|coexpression_cluster_id=C6|description=CAGE_peak_10_at_PARVB_5end|id=chr22:44421709..44421728,+|ontology_enrichment_celltype=CL:0000738!9.03e-79!140;CL:0000037!8.79e-76!172;CL:0000566!8.79e-76!172;CL:0002032!2.27e-73!165;CL:0000837!2.27e-73!165;CL:0000988!3.11e-70!182;CL:0002087!6.49e-67!119;CL:0002031!2.01e-65!124;CL:0002057!1.42e-64!42;CL:0000860!2.38e-59!45;CL:0000763!9.49e-58!112;CL:0000049!9.49e-58!112;CL:0000766!9.51e-57!76;CL:0000557!4.46e-56!71;CL:0002009!1.60e-54!65;CL:0000839!6.69e-52!70;CL:0002194!2.70e-51!63;CL:0000576!2.70e-51!63;CL:0000040!2.70e-51!63;CL:0000559!2.70e-51!63;CL:0000134!2.57e-23!358;CL:0002320!2.15e-22!365;CL:0000219!7.49e-20!390;CL:0002393!3.42e-18!9;CL:0002397!3.42e-18!9;CL:0000945!6.50e-17!24;CL:0000826!6.50e-17!24;CL:0000723!2.35e-15!436;CL:0000034!2.40e-15!444;CL:0000048!2.72e-15!430;CL:0000542!1.64e-13!53;CL:0000051!1.64e-13!53;CL:0000838!1.21e-12!52;CL:0000453!5.20e-09!5;CL:0000236!9.86e-09!14;CL:0000767!4.29e-07!3;CL:0000842!4.64e-07!3;CL:0000875!9.81e-07!3;CL:0002396!9.81e-07!3|ontology_enrichment_celltype_v019=CL:0000576;1.64e-34;48!CL:0000766;2.30e-34;69!CL:0002393;9.00e-34;6!CL:0002397;9.00e-34;6!CL:0000860;9.25e-29;33!CL:0002057;9.25e-29;33!CL:0000473;3.19e-24;39!CL:0000234;3.19e-24;39!CL:0000226;7.39e-17;3!CL:0000842;7.39e-17;3!CL:0000767;8.45e-17;3!CL:0000875;4.62e-16;3!CL:0002396;4.62e-16;3!CL:0002087;2.42e-13;104!CL:0000763;2.13e-12;100!CL:0000094;4.57e-11;8!CL:0000738;7.37e-10;136!CL:0000081;4.55e-08;11!CL:0000988;3.16e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,5.95e-68,42;CL:0002057,5.95e-68,42;CL:0000766,5.39e-64,72;CL:0000473,6.33e-64,48;CL:0000234,6.33e-64,48;CL:0000557,1.71e-55,67;CL:0002009,1.38e-52,61;CL:0000839,4.36e-52,66;CL:0002194,4.61e-50,59;CL:0000576,4.61e-50,59;CL:0000040,4.61e-50,59;CL:0000559,4.61e-50,59;CL:0002393,6.17e-48,9;CL:0002397,6.17e-48,9;CL:0000738,1.00e-46,136;CL:0000763,7.16e-44,108;CL:0000049,7.16e-44,108;CL:0000037,1.26e-36,168;CL:0002087,3.81e-35,115;CL:0000988,1.94e-34,177;CL:0002031,2.33e-33,120;CL:0002032,1.52e-31,161;CL:0000837,1.52e-31,161;CL:0000767,6.14e-17,3;CL:0000226,7.62e-17,3;CL:0000842,7.62e-17,3;CL:0000875,6.02e-16,3;CL:0002396,6.02e-16,3;CL:0000134,7.09e-14,354;CL:0002320,1.79e-13,361;CL:0000219,4.72e-12,386;CL:0000094,3.87e-11,8;CL:0000034,1.22e-10,441;CL:0000048,2.59e-10,427;CL:0000723,4.51e-10,433;CL:0000081,4.04e-08,11|ontology_enrichment_development_v019=CL:0002057;7.36e-47;42!CL:0000049;1.84e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.27e-50!80;UBERON:0002390!1.43e-48!102;UBERON:0003061!1.43e-48!102;UBERON:0001474!2.15e-45!86;UBERON:0002193!3.39e-44!112;UBERON:0004765!2.82e-36!101;UBERON:0001434!2.82e-36!101;UBERON:0002405!1.90e-35!115;UBERON:0002384!3.91e-21!375;UBERON:0002204!6.70e-16!167;UBERON:0003081!1.26e-14!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-48,76;UBERON:0002390,1.58e-45,98;UBERON:0003061,1.58e-45,98;UBERON:0001474,2.09e-44,82;UBERON:0002193,8.87e-41,108;UBERON:0004765,5.49e-40,90;UBERON:0002405,1.60e-38,93;UBERON:0001434,1.91e-35,100;UBERON:0002204,6.00e-19,167;UBERON:0003081,7.48e-19,203;UBERON:0002384,6.36e-13,371;UBERON:0000926,6.60e-10,315;UBERON:0004120,6.60e-10,315;UBERON:0006603,6.60e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.985207073399349,0.708397031823113,1.96682138424452,3.45446458287491,2.16742572642506,0,0,0,0,0,0,6.64794490238253,13.8375668754398,10.6335326650767,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.929716147622738,1.6446715520873,1.54853185447552,0,0.768482119587302,0.236482229888585,1.03423704220986,1.93645405075148,0,0.941211697713023,0.818718450173537,1.12361742222542,0.918251677112708,0.641858054152187,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,1.45104619314292,3.97169657283798,1.86846674698672,0.502497330513487,2.60741459210101,0.868755378820466,2.42159801053347,2.20966581592539,1.26584954976354,5.70389273042243,5.95292039902122,5.45112478321777,2.47122988522289,1.80212271409808,0.964353520182481,1.42506371870624,1.19350006319454,1.27864907635244,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,1.70763890732835,0,0.382273228125229,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14653 | |||
|TSSclassifier=W | |||
|UniProt=Q9HBI1 | |||
|association_with_transcript=-455bp_to_NM_001243386,uc010gzn.2_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_10_at_PARVB_5end | |||
|id=chr22:44421709..44421728,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.03e-79!140;CL:0000037!8.79e-76!172;CL:0000566!8.79e-76!172;CL:0002032!2.27e-73!165;CL:0000837!2.27e-73!165;CL:0000988!3.11e-70!182;CL:0002087!6.49e-67!119;CL:0002031!2.01e-65!124;CL:0002057!1.42e-64!42;CL:0000860!2.38e-59!45;CL:0000763!9.49e-58!112;CL:0000049!9.49e-58!112;CL:0000766!9.51e-57!76;CL:0000557!4.46e-56!71;CL:0002009!1.60e-54!65;CL:0000839!6.69e-52!70;CL:0002194!2.70e-51!63;CL:0000576!2.70e-51!63;CL:0000040!2.70e-51!63;CL:0000559!2.70e-51!63;CL:0000134!2.57e-23!358;CL:0002320!2.15e-22!365;CL:0000219!7.49e-20!390;CL:0002393!3.42e-18!9;CL:0002397!3.42e-18!9;CL:0000945!6.50e-17!24;CL:0000826!6.50e-17!24;CL:0000723!2.35e-15!436;CL:0000034!2.40e-15!444;CL:0000048!2.72e-15!430;CL:0000542!1.64e-13!53;CL:0000051!1.64e-13!53;CL:0000838!1.21e-12!52;CL:0000453!5.20e-09!5;CL:0000236!9.86e-09!14;CL:0000767!4.29e-07!3;CL:0000842!4.64e-07!3;CL:0000875!9.81e-07!3;CL:0002396!9.81e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.64e-34;48!CL:0000766;2.30e-34;69!CL:0002393;9.00e-34;6!CL:0002397;9.00e-34;6!CL:0000860;9.25e-29;33!CL:0002057;9.25e-29;33!CL:0000473;3.19e-24;39!CL:0000234;3.19e-24;39!CL:0000226;7.39e-17;3!CL:0000842;7.39e-17;3!CL:0000767;8.45e-17;3!CL:0000875;4.62e-16;3!CL:0002396;4.62e-16;3!CL:0002087;2.42e-13;104!CL:0000763;2.13e-12;100!CL:0000094;4.57e-11;8!CL:0000738;7.37e-10;136!CL:0000081;4.55e-08;11!CL:0000988;3.16e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.95e-68,42;CL:0002057,5.95e-68,42;CL:0000766,5.39e-64,72;CL:0000473,6.33e-64,48;CL:0000234,6.33e-64,48;CL:0000557,1.71e-55,67;CL:0002009,1.38e-52,61;CL:0000839,4.36e-52,66;CL:0002194,4.61e-50,59;CL:0000576,4.61e-50,59;CL:0000040,4.61e-50,59;CL:0000559,4.61e-50,59;CL:0002393,6.17e-48,9;CL:0002397,6.17e-48,9;CL:0000738,1.00e-46,136;CL:0000763,7.16e-44,108;CL:0000049,7.16e-44,108;CL:0000037,1.26e-36,168;CL:0002087,3.81e-35,115;CL:0000988,1.94e-34,177;CL:0002031,2.33e-33,120;CL:0002032,1.52e-31,161;CL:0000837,1.52e-31,161;CL:0000767,6.14e-17,3;CL:0000226,7.62e-17,3;CL:0000842,7.62e-17,3;CL:0000875,6.02e-16,3;CL:0002396,6.02e-16,3;CL:0000134,7.09e-14,354;CL:0002320,1.79e-13,361;CL:0000219,4.72e-12,386;CL:0000094,3.87e-11,8;CL:0000034,1.22e-10,441;CL:0000048,2.59e-10,427;CL:0000723,4.51e-10,433;CL:0000081,4.04e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-47;42!CL:0000049;1.84e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.27e-50!80;UBERON:0002390!1.43e-48!102;UBERON:0003061!1.43e-48!102;UBERON:0001474!2.15e-45!86;UBERON:0002193!3.39e-44!112;UBERON:0004765!2.82e-36!101;UBERON:0001434!2.82e-36!101;UBERON:0002405!1.90e-35!115;UBERON:0002384!3.91e-21!375;UBERON:0002204!6.70e-16!167;UBERON:0003081!1.26e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-48,76;UBERON:0002390,1.58e-45,98;UBERON:0003061,1.58e-45,98;UBERON:0001474,2.09e-44,82;UBERON:0002193,8.87e-41,108;UBERON:0004765,5.49e-40,90;UBERON:0002405,1.60e-38,93;UBERON:0001434,1.91e-35,100;UBERON:0002204,6.00e-19,167;UBERON:0003081,7.48e-19,203;UBERON:0002384,6.36e-13,371;UBERON:0000926,6.60e-10,315;UBERON:0004120,6.60e-10,315;UBERON:0006603,6.60e-10,315 | |||
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|short_description=p10@PARVB | |||
}} |
Revision as of 12:18, 12 September 2013
Short description: | p10@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PARVB_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -455bp_to_NM_001243386, uc010gzn.2_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | Q9HBI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.53e-48 | 76 |
hematopoietic system | 1.58e-45 | 98 |
blood island | 1.58e-45 | 98 |
bone element | 2.09e-44 | 82 |
hemolymphoid system | 8.87e-41 | 108 |
skeletal element | 5.49e-40 | 90 |
immune system | 1.60e-38 | 93 |
skeletal system | 1.91e-35 | 100 |
musculoskeletal system | 6.00e-19 | 167 |
lateral plate mesoderm | 7.48e-19 | 203 |
connective tissue | 6.36e-13 | 371 |
mesoderm | 6.60e-10 | 315 |
mesoderm-derived structure | 6.60e-10 | 315 |
presumptive mesoderm | 6.60e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.