FFCP PHASE1:Mm9::chr10:111433196..111433201,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:111433196..111433201,+|id=chr10:111433196..111433201,+|ontology_enrichment_celltype=CL:0000988!1.63e-21!32;CL:0002032!1.63e-21!32;CL:0000037!1.63e-21!32;CL:0000566!1.63e-21!32;CL:0000837!1.63e-21!32;CL:0002320!8.52e-16!46;CL:0000134!8.52e-16!46;CL:0000063!4.78e-14!66;CL:0002031!6.77e-14!25;CL:0000219!9.24e-14!54;CL:0000034!2.26e-13!97;CL:0000144!5.51e-13!121;CL:0000012!5.51e-13!121;CL:0000738!8.73e-13!17;CL:0002087!8.73e-13!17;CL:0000049!1.49e-12!19;CL:0000838!5.65e-11!12;CL:0000723!1.08e-10!91;CL:0000048!1.08e-10!91;CL:0002371!1.24e-10!118;CL:0000542!5.95e-10!13;CL:0000051!5.95e-10!13;CL:0000084!9.58e-10!11;CL:0000827!9.58e-10!11;CL:0000548!1.71e-09!115;CL:0000004!1.71e-09!115;CL:0000255!1.71e-09!115;CL:0000557!6.82e-09!7;CL:0000893!7.85e-09!6;CL:0002489!7.85e-09!6;CL:0000898!7.85e-09!6;CL:0000809!7.85e-09!6;CL:0000810!7.85e-09!6;CL:0000895!7.85e-09!6;CL:0000808!7.85e-09!6;CL:0000894!7.85e-09!6;CL:0000806!7.85e-09!6;CL:0000807!7.85e-09!6;CL:0000805!7.85e-09!6;CL:0002425!7.85e-09!6;CL:0002436!7.85e-09!6;CL:0002427!7.85e-09!6;CL:0002428!7.85e-09!6;CL:0002429!7.85e-09!6;CL:0002433!7.85e-09!6;CL:0002431!7.85e-09!6;CL:0002432!7.85e-09!6;CL:0000624!9.16e-09!8;CL:0000763!1.29e-08!16;CL:0000791!1.19e-07!9;CL:0000789!1.19e-07!9;CL:0002420!1.19e-07!9;CL:0002419!1.19e-07!9;CL:0000790!1.19e-07!9|ontology_enrichment_celltype_v019_2=CL:0000049,5.19e-16,19;CL:0000557,1.10e-14,7;CL:0000988,2.87e-13,32;CL:0002032,2.87e-13,32;CL:0000037,2.87e-13,32;CL:0000837,2.87e-13,32;CL:0000192,5.59e-12,3;CL:0000359,5.59e-12,3;CL:0002539,5.59e-12,3;CL:0000514,5.59e-12,3;CL:0000034,6.06e-10,97;CL:0002476,6.02e-09,2;CL:0002320,1.19e-08,46;CL:0000134,1.19e-08,46;CL:0000763,1.20e-08,16;CL:0000219,1.60e-08,54;CL:0000723,5.25e-07,91;CL:0000048,5.25e-07,91;CL:0000355,8.28e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.52e-16!46;UBERON:0002204!5.88e-12!32;UBERON:0002390!6.04e-09!45;UBERON:0003061!6.04e-09!45;UBERON:0002371!1.29e-08!16;UBERON:0002193!4.60e-08!48;UBERON:0001474!6.55e-08!22;UBERON:0004765!6.55e-08!22;UBERON:0001434!6.55e-08!22;UBERON:0002329!8.38e-08!11;UBERON:0003077!8.38e-08!11;UBERON:0003059!8.38e-08!11;UBERON:0007282!8.38e-08!11;UBERON:0009618!8.38e-08!11;UBERON:0007285!8.38e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.59e-12,3;UBERON:0004237,5.59e-12,3;UBERON:0004695,5.59e-12,3;UBERON:0002111,5.59e-12,3;UBERON:0004178,5.59e-12,3;UBERON:0002204,1.20e-10,32;UBERON:0000947,4.14e-09,4;UBERON:0001637,4.14e-09,4;UBERON:0004573,4.14e-09,4;UBERON:0003509,4.14e-09,4;UBERON:0004571,4.14e-09,4;UBERON:0010191,4.14e-09,4;UBERON:0004572,4.14e-09,4;UBERON:0002384,1.19e-08,46;UBERON:0002371,1.20e-08,16;UBERON:0000055,2.23e-07,5;UBERON:0007500,2.23e-07,5;UBERON:0001981,2.23e-07,5;UBERON:0002049,2.23e-07,5;UBERON:0007798,2.23e-07,5;UBERON:0004537,2.23e-07,5;UBERON:0006965,2.23e-07,5;UBERON:0001134,8.28e-07,9;UBERON:0002036,8.28e-07,9;UBERON:0002385,8.28e-07,9;UBERON:0000486,8.28e-07,9;UBERON:0007503,8.28e-07,9;UBERON:0001015,8.28e-07,9;UBERON:0002329,8.28e-07,9;UBERON:0003082,8.28e-07,9;UBERON:0003059,8.28e-07,9;UBERON:0007282,8.28e-07,9;UBERON:0004290,8.28e-07,9;UBERON:0009618,8.28e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,1.54867594366833,0.936258105287974,0.513653904676515,0.159544317990673,0.513602189793617,0.699363219351979,1.33243904726265,0.404950534779652,0,0,0.411343300817216,0.42438965179803,0,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,28.2351114254887,1.36609096991689,1.45653105909346,1.25896817975577,1.72340783073175,2.20256102594018,1.56478268869608,0,0,0,0,0,0.838913030288682,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0.779358013808606,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,2.03685711660064,5.99902730993408,2.66847476853436,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,5.66165395652373,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,3.01582567878545,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,2.37969801991397,1.25956307091292,2.48759952847963,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr10:111433196..111433201,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:111433196..111433201,+ | |||
|id=chr10:111433196..111433201,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.63e-21!32;CL:0002032!1.63e-21!32;CL:0000037!1.63e-21!32;CL:0000566!1.63e-21!32;CL:0000837!1.63e-21!32;CL:0002320!8.52e-16!46;CL:0000134!8.52e-16!46;CL:0000063!4.78e-14!66;CL:0002031!6.77e-14!25;CL:0000219!9.24e-14!54;CL:0000034!2.26e-13!97;CL:0000144!5.51e-13!121;CL:0000012!5.51e-13!121;CL:0000738!8.73e-13!17;CL:0002087!8.73e-13!17;CL:0000049!1.49e-12!19;CL:0000838!5.65e-11!12;CL:0000723!1.08e-10!91;CL:0000048!1.08e-10!91;CL:0002371!1.24e-10!118;CL:0000542!5.95e-10!13;CL:0000051!5.95e-10!13;CL:0000084!9.58e-10!11;CL:0000827!9.58e-10!11;CL:0000548!1.71e-09!115;CL:0000004!1.71e-09!115;CL:0000255!1.71e-09!115;CL:0000557!6.82e-09!7;CL:0000893!7.85e-09!6;CL:0002489!7.85e-09!6;CL:0000898!7.85e-09!6;CL:0000809!7.85e-09!6;CL:0000810!7.85e-09!6;CL:0000895!7.85e-09!6;CL:0000808!7.85e-09!6;CL:0000894!7.85e-09!6;CL:0000806!7.85e-09!6;CL:0000807!7.85e-09!6;CL:0000805!7.85e-09!6;CL:0002425!7.85e-09!6;CL:0002436!7.85e-09!6;CL:0002427!7.85e-09!6;CL:0002428!7.85e-09!6;CL:0002429!7.85e-09!6;CL:0002433!7.85e-09!6;CL:0002431!7.85e-09!6;CL:0002432!7.85e-09!6;CL:0000624!9.16e-09!8;CL:0000763!1.29e-08!16;CL:0000791!1.19e-07!9;CL:0000789!1.19e-07!9;CL:0002420!1.19e-07!9;CL:0002419!1.19e-07!9;CL:0000790!1.19e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.19e-16,19;CL:0000557,1.10e-14,7;CL:0000988,2.87e-13,32;CL:0002032,2.87e-13,32;CL:0000037,2.87e-13,32;CL:0000837,2.87e-13,32;CL:0000192,5.59e-12,3;CL:0000359,5.59e-12,3;CL:0002539,5.59e-12,3;CL:0000514,5.59e-12,3;CL:0000034,6.06e-10,97;CL:0002476,6.02e-09,2;CL:0002320,1.19e-08,46;CL:0000134,1.19e-08,46;CL:0000763,1.20e-08,16;CL:0000219,1.60e-08,54;CL:0000723,5.25e-07,91;CL:0000048,5.25e-07,91;CL:0000355,8.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.52e-16!46;UBERON:0002204!5.88e-12!32;UBERON:0002390!6.04e-09!45;UBERON:0003061!6.04e-09!45;UBERON:0002371!1.29e-08!16;UBERON:0002193!4.60e-08!48;UBERON:0001474!6.55e-08!22;UBERON:0004765!6.55e-08!22;UBERON:0001434!6.55e-08!22;UBERON:0002329!8.38e-08!11;UBERON:0003077!8.38e-08!11;UBERON:0003059!8.38e-08!11;UBERON:0007282!8.38e-08!11;UBERON:0009618!8.38e-08!11;UBERON:0007285!8.38e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.59e-12,3;UBERON:0004237,5.59e-12,3;UBERON:0004695,5.59e-12,3;UBERON:0002111,5.59e-12,3;UBERON:0004178,5.59e-12,3;UBERON:0002204,1.20e-10,32;UBERON:0000947,4.14e-09,4;UBERON:0001637,4.14e-09,4;UBERON:0004573,4.14e-09,4;UBERON:0003509,4.14e-09,4;UBERON:0004571,4.14e-09,4;UBERON:0010191,4.14e-09,4;UBERON:0004572,4.14e-09,4;UBERON:0002384,1.19e-08,46;UBERON:0002371,1.20e-08,16;UBERON:0000055,2.23e-07,5;UBERON:0007500,2.23e-07,5;UBERON:0001981,2.23e-07,5;UBERON:0002049,2.23e-07,5;UBERON:0007798,2.23e-07,5;UBERON:0004537,2.23e-07,5;UBERON:0006965,2.23e-07,5;UBERON:0001134,8.28e-07,9;UBERON:0002036,8.28e-07,9;UBERON:0002385,8.28e-07,9;UBERON:0000486,8.28e-07,9;UBERON:0007503,8.28e-07,9;UBERON:0001015,8.28e-07,9;UBERON:0002329,8.28e-07,9;UBERON:0003082,8.28e-07,9;UBERON:0003059,8.28e-07,9;UBERON:0007282,8.28e-07,9;UBERON:0004290,8.28e-07,9;UBERON:0009618,8.28e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,1.54867594366833,0.936258105287974,0.513653904676515,0.159544317990673,0.513602189793617,0.699363219351979,1.33243904726265,0.404950534779652,0,0,0.411343300817216,0.42438965179803,0,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,28.2351114254887,1.36609096991689,1.45653105909346,1.25896817975577,1.72340783073175,2.20256102594018,1.56478268869608,0,0,0,0,0,0.838913030288682,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0.779358013808606,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,2.03685711660064,5.99902730993408,2.66847476853436,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,5.66165395652373,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,3.01582567878545,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,2.37969801991397,1.25956307091292,2.48759952847963,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr10:111433196..111433201,+ | |||
}} |
Revision as of 15:43, 12 September 2013
Short description: | p@chr10:111433196..111433201, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111433196..111433201, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.19e-16 | 19 |
granulocyte monocyte progenitor cell | 1.10e-14 | 7 |
hematopoietic cell | 2.87e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.87e-13 | 32 |
hematopoietic stem cell | 2.87e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.87e-13 | 32 |
smooth muscle cell | 5.59e-12 | 3 |
vascular associated smooth muscle cell | 5.59e-12 | 3 |
aortic smooth muscle cell | 5.59e-12 | 3 |
smooth muscle myoblast | 5.59e-12 | 3 |
stem cell | 6.06e-10 | 97 |
bone marrow macrophage | 6.02e-09 | 2 |
connective tissue cell | 1.19e-08 | 46 |
mesenchymal cell | 1.19e-08 | 46 |
myeloid cell | 1.20e-08 | 16 |
motile cell | 1.60e-08 | 54 |
somatic stem cell | 5.25e-07 | 91 |
multi fate stem cell | 5.25e-07 | 91 |
multi-potent skeletal muscle stem cell | 8.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.59e-12 | 3 |
blood vessel smooth muscle | 5.59e-12 | 3 |
arterial system smooth muscle | 5.59e-12 | 3 |
artery smooth muscle tissue | 5.59e-12 | 3 |
aorta smooth muscle tissue | 5.59e-12 | 3 |
musculoskeletal system | 1.20e-10 | 32 |
aorta | 4.14e-09 | 4 |
artery | 4.14e-09 | 4 |
systemic artery | 4.14e-09 | 4 |
arterial blood vessel | 4.14e-09 | 4 |
systemic arterial system | 4.14e-09 | 4 |
aortic system | 4.14e-09 | 4 |
arterial system | 4.14e-09 | 4 |
connective tissue | 1.19e-08 | 46 |
bone marrow | 1.20e-08 | 16 |
vessel | 2.23e-07 | 5 |
epithelial tube open at both ends | 2.23e-07 | 5 |
blood vessel | 2.23e-07 | 5 |
vasculature | 2.23e-07 | 5 |
vascular system | 2.23e-07 | 5 |
blood vasculature | 2.23e-07 | 5 |
vascular cord | 2.23e-07 | 5 |
skeletal muscle tissue | 8.28e-07 | 9 |
striated muscle tissue | 8.28e-07 | 9 |
muscle tissue | 8.28e-07 | 9 |
multilaminar epithelium | 8.28e-07 | 9 |
epithelial vesicle | 8.28e-07 | 9 |
musculature | 8.28e-07 | 9 |
somite | 8.28e-07 | 9 |
myotome | 8.28e-07 | 9 |
presomitic mesoderm | 8.28e-07 | 9 |
presumptive segmental plate | 8.28e-07 | 9 |
dermomyotome | 8.28e-07 | 9 |
trunk paraxial mesoderm | 8.28e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.