FFCP PHASE1:Hg19::chr2:219188066..219188077,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25953|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9153|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AK309308_5end|description=CAGE_peak_6_at_PNKD_5end|id=chr2:219188066..219188077,+|ontology_enrichment_celltype=CL:0002194!1.10e-19!63;CL:0000576!1.10e-19!63;CL:0000040!1.10e-19!63;CL:0000559!1.10e-19!63;CL:0002057!5.91e-19!42;CL:0002009!9.24e-19!65;CL:0000860!8.10e-18!45;CL:0000839!1.78e-16!70;CL:0000557!8.70e-16!71;CL:0000763!5.83e-15!112;CL:0000049!5.83e-15!112;CL:0000766!6.36e-15!76|ontology_enrichment_celltype_v019=CL:0000473;5.46e-27;39!CL:0000234;5.46e-27;39!CL:0000860;4.37e-22;33!CL:0002057;4.37e-22;33!CL:0000576;1.02e-17;48!CL:0000766;4.20e-13;69!CL:0000235;6.30e-11;6!CL:0000763;2.05e-07;100!CL:1000746;3.31e-07;7!CL:1000612;3.31e-07;7|ontology_enrichment_celltype_v019_2=CL:0000473,1.61e-32,48;CL:0000234,1.61e-32,48;CL:0002194,2.09e-30,59;CL:0000576,2.09e-30,59;CL:0000040,2.09e-30,59;CL:0000559,2.09e-30,59;CL:0002009,5.34e-29,61;CL:0000839,7.34e-26,66;CL:0000557,2.73e-25,67;CL:0000860,2.53e-24,42;CL:0002057,2.53e-24,42;CL:0000766,3.55e-24,72;CL:0000763,1.31e-18,108;CL:0000049,1.31e-18,108;CL:0002087,4.61e-13,115;CL:0002031,2.82e-11,120;CL:0000988,5.22e-11,177;CL:0000235,6.76e-11,6;CL:0000037,2.70e-10,168;CL:0002032,4.48e-10,161;CL:0000837,4.48e-10,161;CL:0000738,5.94e-10,136;CL:1000746,4.03e-07,7;CL:1000612,4.03e-07,7|ontology_enrichment_development_v019=CL:0002057;1.52e-19;42!CL:0000049;7.61e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.23e-17!115;UBERON:0002193!6.93e-14!112;UBERON:0002371!3.37e-13!80;UBERON:0002390!1.73e-12!102;UBERON:0003061!1.73e-12!102;UBERON:0001474!2.24e-12!86;UBERON:0005172!7.34e-10!55;UBERON:0005173!7.34e-10!55;UBERON:0004765!8.25e-09!101;UBERON:0001434!8.25e-09!101;UBERON:0002417!2.88e-08!61;UBERON:0000916!2.88e-08!61;UBERON:0000926!1.01e-07!448;UBERON:0004120!1.01e-07!448;UBERON:0006603!1.01e-07!448;UBERON:0000062!2.38e-07!511|ontology_enrichment_uberon_v019=UBERON:0000353;8.25e-08;15!UBERON:0000074;3.31e-07;7!UBERON:0001229;3.31e-07;7!UBERON:0002423;8.14e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-23,76;UBERON:0001474,5.99e-21,82;UBERON:0002405,1.62e-20,93;UBERON:0002193,3.64e-20,108;UBERON:0002390,5.44e-20,98;UBERON:0003061,5.44e-20,98;UBERON:0004765,5.63e-18,90;UBERON:0001434,5.79e-15,100;UBERON:0003081,1.41e-10,203;UBERON:0005172,7.29e-09,54;UBERON:0005173,7.29e-09,54;UBERON:0000353,7.93e-08,15;UBERON:0000058,2.02e-07,19;UBERON:0002417,2.22e-07,60;UBERON:0000916,2.22e-07,60;UBERON:0010532,4.03e-07,7;UBERON:0000074,4.03e-07,7;UBERON:0001229,4.03e-07,7;UBERON:0001230,4.03e-07,7;UBERON:0003220,4.03e-07,7;UBERON:0005749,4.03e-07,7;UBERON:0004199,4.03e-07,7;UBERON:0004209,4.03e-07,7;UBERON:0004198,4.03e-07,7;UBERON:0009497,8.77e-07,25;UBERON:0000015,8.77e-07,25;UBERON:0002423,8.77e-07,25;UBERON:0006235,8.77e-07,25;UBERON:0004161,8.77e-07,25|phase1_expression=0,0.856402095563933,0.281908808191942,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0.534893840235659,0.903106483949403,0.550975469195755,0,0.383829398097213,2.16742572642506,0.919421224478927,0,0.369754010166788,0.774672005803016,1.27952309238679,1.46800219667424,0,2.00544447470142,1.30206522429511,2.01523926815932,1.6194683300949,3.34848237924443,3.48955773070955,4.91238726795452,3.88134497900506,3.25400651667958,2.87817521615278,1.85823822537062,0.863077176966451,3.58624989140741,2.36482229888585,1.72372840368309,5.16387746867061,1.35426486594342,3.20011977222428,4.09359225086769,0.449446968890169,0.918251677112708,1.60464513538047,0.639337125799041,2.30895910130701,4.78712778291916,2.55734850319616,1.45104619314292,0.56738522469114,0.622822248995575,2.26123798731069,4.17186334736161,2.82345498116652,0.605399502633369,0.736555271975129,2.21523671208619,0.845021145247767,1.70083439972035,1.88692780957538,1.34794357375794,2.10247649978109,1.44653028027372,0.855038231223746,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0,0,0,0.378139268656271,0.886917589850256,0.614843499851882,1.0478326039817,0.364295288292542,0,0.324547393654683,0.348259474598534,1.19662164466979,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0,0,0,0.71153252537342,0.33472061276467,0,1.52054421143703,0.24406205754817,0,0,0.0892997282840798,1.57170560838319,0.225222960966644,1.53316637465883,0.949265659568129,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0.622422070799533,0.67355336034844,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,2.87447256726495,0,0,0,0,0.30648779579902,0.75119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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9153 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK309308_5end | |||
|description=CAGE_peak_6_at_PNKD_5end | |||
|id=chr2:219188066..219188077,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.10e-19!63;CL:0000576!1.10e-19!63;CL:0000040!1.10e-19!63;CL:0000559!1.10e-19!63;CL:0002057!5.91e-19!42;CL:0002009!9.24e-19!65;CL:0000860!8.10e-18!45;CL:0000839!1.78e-16!70;CL:0000557!8.70e-16!71;CL:0000763!5.83e-15!112;CL:0000049!5.83e-15!112;CL:0000766!6.36e-15!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.46e-27;39!CL:0000234;5.46e-27;39!CL:0000860;4.37e-22;33!CL:0002057;4.37e-22;33!CL:0000576;1.02e-17;48!CL:0000766;4.20e-13;69!CL:0000235;6.30e-11;6!CL:0000763;2.05e-07;100!CL:1000746;3.31e-07;7!CL:1000612;3.31e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.61e-32,48;CL:0000234,1.61e-32,48;CL:0002194,2.09e-30,59;CL:0000576,2.09e-30,59;CL:0000040,2.09e-30,59;CL:0000559,2.09e-30,59;CL:0002009,5.34e-29,61;CL:0000839,7.34e-26,66;CL:0000557,2.73e-25,67;CL:0000860,2.53e-24,42;CL:0002057,2.53e-24,42;CL:0000766,3.55e-24,72;CL:0000763,1.31e-18,108;CL:0000049,1.31e-18,108;CL:0002087,4.61e-13,115;CL:0002031,2.82e-11,120;CL:0000988,5.22e-11,177;CL:0000235,6.76e-11,6;CL:0000037,2.70e-10,168;CL:0002032,4.48e-10,161;CL:0000837,4.48e-10,161;CL:0000738,5.94e-10,136;CL:1000746,4.03e-07,7;CL:1000612,4.03e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-19;42!CL:0000049;7.61e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.23e-17!115;UBERON:0002193!6.93e-14!112;UBERON:0002371!3.37e-13!80;UBERON:0002390!1.73e-12!102;UBERON:0003061!1.73e-12!102;UBERON:0001474!2.24e-12!86;UBERON:0005172!7.34e-10!55;UBERON:0005173!7.34e-10!55;UBERON:0004765!8.25e-09!101;UBERON:0001434!8.25e-09!101;UBERON:0002417!2.88e-08!61;UBERON:0000916!2.88e-08!61;UBERON:0000926!1.01e-07!448;UBERON:0004120!1.01e-07!448;UBERON:0006603!1.01e-07!448;UBERON:0000062!2.38e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;8.25e-08;15!UBERON:0000074;3.31e-07;7!UBERON:0001229;3.31e-07;7!UBERON:0002423;8.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-23,76;UBERON:0001474,5.99e-21,82;UBERON:0002405,1.62e-20,93;UBERON:0002193,3.64e-20,108;UBERON:0002390,5.44e-20,98;UBERON:0003061,5.44e-20,98;UBERON:0004765,5.63e-18,90;UBERON:0001434,5.79e-15,100;UBERON:0003081,1.41e-10,203;UBERON:0005172,7.29e-09,54;UBERON:0005173,7.29e-09,54;UBERON:0000353,7.93e-08,15;UBERON:0000058,2.02e-07,19;UBERON:0002417,2.22e-07,60;UBERON:0000916,2.22e-07,60;UBERON:0010532,4.03e-07,7;UBERON:0000074,4.03e-07,7;UBERON:0001229,4.03e-07,7;UBERON:0001230,4.03e-07,7;UBERON:0003220,4.03e-07,7;UBERON:0005749,4.03e-07,7;UBERON:0004199,4.03e-07,7;UBERON:0004209,4.03e-07,7;UBERON:0004198,4.03e-07,7;UBERON:0009497,8.77e-07,25;UBERON:0000015,8.77e-07,25;UBERON:0002423,8.77e-07,25;UBERON:0006235,8.77e-07,25;UBERON:0004161,8.77e-07,25 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0.534893840235659,0.903106483949403,0.550975469195755,0,0.383829398097213,2.16742572642506,0.919421224478927,0,0.369754010166788,0.774672005803016,1.27952309238679,1.46800219667424,0,2.00544447470142,1.30206522429511,2.01523926815932,1.6194683300949,3.34848237924443,3.48955773070955,4.91238726795452,3.88134497900506,3.25400651667958,2.87817521615278,1.85823822537062,0.863077176966451,3.58624989140741,2.36482229888585,1.72372840368309,5.16387746867061,1.35426486594342,3.20011977222428,4.09359225086769,0.449446968890169,0.918251677112708,1.60464513538047,0.639337125799041,2.30895910130701,4.78712778291916,2.55734850319616,1.45104619314292,0.56738522469114,0.622822248995575,2.26123798731069,4.17186334736161,2.82345498116652,0.605399502633369,0.736555271975129,2.21523671208619,0.845021145247767,1.70083439972035,1.88692780957538,1.34794357375794,2.10247649978109,1.44653028027372,0.855038231223746,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0,0,0,0.378139268656271,0.886917589850256,0.614843499851882,1.0478326039817,0.364295288292542,0,0.324547393654683,0.348259474598534,1.19662164466979,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0,0,0,0.71153252537342,0.33472061276467,0,1.52054421143703,0.24406205754817,0,0,0.0892997282840798,1.57170560838319,0.225222960966644,1.53316637465883,0.949265659568129,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0.622422070799533,0.67355336034844,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,2.87447256726495,0,0,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0.37223371266318,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,1.92972281457866,2.76269842704961,0,0,0.591534000199219,1.01150814046861,1.44606617930089,0.441175890929576,0.217879444092406,1.18635309555548,0.404493924480493,0.588664395376038,0.769494313892781,1.4763109092493,2.80483547606892,0.4115740113314,0,5.07020139287323,0,3.54473944008842,0,0.368965315629341,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,1.87676382089396,0.925971025153221,1.71228737011138,2.37061319387782,3.43394464837949,3.69325509131096,5.85010662848094,5.05345951781676,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0.288239906833923,0,0.380987365753014,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0.387815147273333,0,0.845302752556,0.797814349754612,1.04007436911366,0,2.83698264046557,0,2.28764789853036,0.542621605391443,1.64648067356154,0,1.06617584622764,0,0.301439377059586,0,0.099972991182057,4.86495122564762,5.52482800575339,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.36807447515742,0,0,1.03985430765404,0.356857977594324,0.946214490203608,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,1.76221041716467,0.686286847621712,0.620304078368662,1.50999940573032,0.426910231213777,0,1.66435439510497,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0.846016147141356,0.200506470303285,0,0.34444334449382,0.364182336013434,0.786746489756545,1.35359883872224,0.308061348417659,0.784349769176855,0,0.844413031143006,2.27466768141793,0.170093705276516,1.29549549661284,1.54227252690289,1.35473218771926,6.02027728625824,0.509752546090077,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.515205058238611,0.457847324091717,0,0,0.650060246036521,0,0,0.462145851343933,0.460511024178389,0.137836572484531,0.214840489736547,0.725083469571143,0.255679882248303,0,0.165284915360978,0,0.765676274967505,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,1.71567174531442,0.511795582622668,0,0.318203247925937,0,0.719489830333259,0.823611089208164,0.706874414074119,0.202182481573316,0,0.421258456238981,1.95053495635836,0.243713489631284,0,0,0.424216295861138,0,0,0,0,1.15755106853338,0.655894752046633,0.202910376962704,0.30982349809975,0,0.573645408816206,0.589494246078727,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0.941438007767792,0.43050537267123,0,0.443430153536676,0,2.02979043692868,3.0585488285695,2.84823593587081,0.714695326373367,0,0,0,0.79312517629427,0.747768497892312,3.84991942105343,0,0,0,0,0,0.997896857164083,0.383010740264733,0.635020748171649,0.324621940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| |||
|short_description=p6@PNKD | |||
}} |
Revision as of 16:50, 12 September 2013
Short description: | p6@PNKD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PNKD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK309308_5end |
EntrezGene: | PNKD |
HGNC: | 9153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.61e-32 | 48 |
phagocyte | 1.61e-32 | 48 |
monopoietic cell | 2.09e-30 | 59 |
monocyte | 2.09e-30 | 59 |
monoblast | 2.09e-30 | 59 |
promonocyte | 2.09e-30 | 59 |
macrophage dendritic cell progenitor | 5.34e-29 | 61 |
myeloid lineage restricted progenitor cell | 7.34e-26 | 66 |
granulocyte monocyte progenitor cell | 2.73e-25 | 67 |
classical monocyte | 2.53e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.53e-24 | 42 |
myeloid leukocyte | 3.55e-24 | 72 |
myeloid cell | 1.31e-18 | 108 |
common myeloid progenitor | 1.31e-18 | 108 |
nongranular leukocyte | 4.61e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.82e-11 | 120 |
hematopoietic cell | 5.22e-11 | 177 |
macrophage | 6.76e-11 | 6 |
hematopoietic stem cell | 2.70e-10 | 168 |
hematopoietic oligopotent progenitor cell | 4.48e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.48e-10 | 161 |
leukocyte | 5.94e-10 | 136 |
glomerular cell | 4.03e-07 | 7 |
kidney corpuscule cell | 4.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-23 | 76 |
bone element | 5.99e-21 | 82 |
immune system | 1.62e-20 | 93 |
hemolymphoid system | 3.64e-20 | 108 |
hematopoietic system | 5.44e-20 | 98 |
blood island | 5.44e-20 | 98 |
skeletal element | 5.63e-18 | 90 |
skeletal system | 5.79e-15 | 100 |
lateral plate mesoderm | 1.41e-10 | 203 |
abdomen element | 7.29e-09 | 54 |
abdominal segment element | 7.29e-09 | 54 |
parenchyma | 7.93e-08 | 15 |
duct | 2.02e-07 | 19 |
abdominal segment of trunk | 2.22e-07 | 60 |
abdomen | 2.22e-07 | 60 |
primitive nephron | 4.03e-07 | 7 |
renal glomerulus | 4.03e-07 | 7 |
renal corpuscle | 4.03e-07 | 7 |
glomerular capsule | 4.03e-07 | 7 |
metanephric mesenchyme | 4.03e-07 | 7 |
glomerular tuft | 4.03e-07 | 7 |
S-shaped body | 4.03e-07 | 7 |
renal vesicle | 4.03e-07 | 7 |
comma-shaped body | 4.03e-07 | 7 |
epithelium of foregut-midgut junction | 8.77e-07 | 25 |
anatomical boundary | 8.77e-07 | 25 |
hepatobiliary system | 8.77e-07 | 25 |
foregut-midgut junction | 8.77e-07 | 25 |
septum transversum | 8.77e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.