FFCP PHASE1:Mm9::chr11:4136826..4136840,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18413|HGNC=|MCL_coexpression_id=3|UniProt=P53347|association_with_transcript=38bp_to_NM_001013365,uc007hus.2_5end|description=CAGE_peak_1_at_Osm_5end|id=chr11:4136826..4136840,+|ontology_enrichment_celltype=CL:0000988!4.68e-12!32;CL:0002032!4.68e-12!32;CL:0000037!4.68e-12!32;CL:0000566!4.68e-12!32;CL:0000837!4.68e-12!32;CL:0002320!2.42e-10!46;CL:0000134!2.42e-10!46;CL:0000219!9.77e-09!54;CL:0002031!5.41e-08!25;CL:0000049!1.40e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,1.15e-16,32;CL:0002032,1.15e-16,32;CL:0000037,1.15e-16,32;CL:0000837,1.15e-16,32;CL:0002320,1.72e-15,46;CL:0000134,1.72e-15,46;CL:0000049,2.88e-14,19;CL:0000219,1.48e-12,54;CL:0000034,3.17e-12,97;CL:0000723,1.07e-09,91;CL:0000048,1.07e-09,91;CL:0000763,7.50e-09,16;CL:0002092,5.29e-08,3;CL:0002540,5.29e-08,3;CL:0002031,1.15e-07,25;CL:0002027,1.88e-07,3;CL:0002006,1.88e-07,3;CL:0002024,1.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.79e-09,3;DOID:4045,2.79e-09,3|ontology_enrichment_uberon=UBERON:0002193!9.26e-19!48;UBERON:0002390!5.36e-17!45;UBERON:0003061!5.36e-17!45;UBERON:0002405!3.61e-13!70;UBERON:0001474!5.29e-11!22;UBERON:0004765!5.29e-11!22;UBERON:0001434!5.29e-11!22;UBERON:0002204!5.36e-11!32;UBERON:0002384!2.42e-10!46;UBERON:0003081!4.06e-10!88;UBERON:0002371!9.63e-10!16;UBERON:0004177!1.33e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.66e-17,32;UBERON:0002371,7.95e-17,16;UBERON:0002384,1.72e-15,46;UBERON:0001474,5.58e-14,22;UBERON:0004765,5.58e-14,22;UBERON:0001434,5.58e-14,22;UBERON:0002390,4.38e-09,45;UBERON:0003061,4.38e-09,45;UBERON:0002193,2.55e-08,48;UBERON:0002405,2.55e-08,48|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.61545305636414,1.83025338797167,3.7450324211519,0.34243593645101,0.239316476986009,0.513602189793617,0.262261207256992,1.66554880907831,2.22722794128809,1.39912375625629,1.26184866143295,0.548457734422955,0.84877930359606,0.680346321208558,1.88652807281682,3.91799683708403,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,345.288595357949,451.611829134757,71.7227529244104,669.407433379294,567.610798000468,136.913919554785,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0,0,3.1496490104849,4.94433181283487,3.5524005747305,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0,0.869593466105033,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,4.42305275974937,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,53.1979152806286,67.1891058712617,61.6290601304364,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,136.931571526081,110.402252152213,78.9974528319748,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,1.15078454980324,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.47802552133284,0,0.162964976442026,0,0,0,0,0.780534591431195,0.630540576424764,0.221464689648775,0.637819074629948,2.45794972073607,0,0.433947175744535,0,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.645857706783622,0.0603129249281559,0,0.164140899745061,0,0,1.02522528478712,0.82554747185289,4.8150577116125,0.565105371014073,0.546776910884101,0.457556346413045,13.7682528295023,18.0537373497519,13.4053974590291,0,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0.706765149637033,0.304827226619999,0.302478555410522,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0.36630324853453,6.64541975145104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0|short_description=p1@Osm}} | ||
|EntrezGene=18413 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=P53347 | |||
|association_with_transcript=38bp_to_NM_001013365,uc007hus.2_5end | |||
|description=CAGE_peak_1_at_Osm_5end | |||
|id=chr11:4136826..4136840,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.68e-12!32;CL:0002032!4.68e-12!32;CL:0000037!4.68e-12!32;CL:0000566!4.68e-12!32;CL:0000837!4.68e-12!32;CL:0002320!2.42e-10!46;CL:0000134!2.42e-10!46;CL:0000219!9.77e-09!54;CL:0002031!5.41e-08!25;CL:0000049!1.40e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.15e-16,32;CL:0002032,1.15e-16,32;CL:0000037,1.15e-16,32;CL:0000837,1.15e-16,32;CL:0002320,1.72e-15,46;CL:0000134,1.72e-15,46;CL:0000049,2.88e-14,19;CL:0000219,1.48e-12,54;CL:0000034,3.17e-12,97;CL:0000723,1.07e-09,91;CL:0000048,1.07e-09,91;CL:0000763,7.50e-09,16;CL:0002092,5.29e-08,3;CL:0002540,5.29e-08,3;CL:0002031,1.15e-07,25;CL:0002027,1.88e-07,3;CL:0002006,1.88e-07,3;CL:0002024,1.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.79e-09,3;DOID:4045,2.79e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.26e-19!48;UBERON:0002390!5.36e-17!45;UBERON:0003061!5.36e-17!45;UBERON:0002405!3.61e-13!70;UBERON:0001474!5.29e-11!22;UBERON:0004765!5.29e-11!22;UBERON:0001434!5.29e-11!22;UBERON:0002204!5.36e-11!32;UBERON:0002384!2.42e-10!46;UBERON:0003081!4.06e-10!88;UBERON:0002371!9.63e-10!16;UBERON:0004177!1.33e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.66e-17,32;UBERON:0002371,7.95e-17,16;UBERON:0002384,1.72e-15,46;UBERON:0001474,5.58e-14,22;UBERON:0004765,5.58e-14,22;UBERON:0001434,5.58e-14,22;UBERON:0002390,4.38e-09,45;UBERON:0003061,4.38e-09,45;UBERON:0002193,2.55e-08,48;UBERON:0002405,2.55e-08,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.61545305636414,1.83025338797167,3.7450324211519,0.34243593645101,0.239316476986009,0.513602189793617,0.262261207256992,1.66554880907831,2.22722794128809,1.39912375625629,1.26184866143295,0.548457734422955,0.84877930359606,0.680346321208558,1.88652807281682,3.91799683708403,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,345.288595357949,451.611829134757,71.7227529244104,669.407433379294,567.610798000468,136.913919554785,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0,0,3.1496490104849,4.94433181283487,3.5524005747305,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0,0.869593466105033,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,4.42305275974937,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,53.1979152806286,67.1891058712617,61.6290601304364,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,136.931571526081,110.402252152213,78.9974528319748,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,1.15078454980324,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.47802552133284,0,0.162964976442026,0,0,0,0,0.780534591431195,0.630540576424764,0.221464689648775,0.637819074629948,2.45794972073607,0,0.433947175744535,0,4.35124547054968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.645857706783622,0.0603129249281559,0,0.164140899745061,0,0,1.02522528478712,0.82554747185289,4.8150577116125,0.565105371014073,0.546776910884101,0.457556346413045,13.7682528295023,18.0537373497519,13.4053974590291,0,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.443068581523732,0.706765149637033,0.304827226619999,0.302478555410522,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.93841237725591,0.36630324853453,6.64541975145104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p1@Osm | |||
}} |
Revision as of 19:38, 12 September 2013
Short description: | p1@Osm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Osm_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 38bp_to_NM_001013365, uc007hus.2_5end |
EntrezGene: | Osm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.15e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.15e-16 | 32 |
hematopoietic stem cell | 1.15e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.15e-16 | 32 |
connective tissue cell | 1.72e-15 | 46 |
mesenchymal cell | 1.72e-15 | 46 |
common myeloid progenitor | 2.88e-14 | 19 |
motile cell | 1.48e-12 | 54 |
stem cell | 3.17e-12 | 97 |
somatic stem cell | 1.07e-09 | 91 |
multi fate stem cell | 1.07e-09 | 91 |
myeloid cell | 7.50e-09 | 16 |
bone marrow cell | 5.29e-08 | 3 |
mesenchymal stem cell of the bone marrow | 5.29e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.15e-07 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.88e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.88e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.66e-17 | 32 |
bone marrow | 7.95e-17 | 16 |
connective tissue | 1.72e-15 | 46 |
bone element | 5.58e-14 | 22 |
skeletal element | 5.58e-14 | 22 |
skeletal system | 5.58e-14 | 22 |
hematopoietic system | 4.38e-09 | 45 |
blood island | 4.38e-09 | 45 |
hemolymphoid system | 2.55e-08 | 48 |
immune system | 2.55e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.79e-09 | 3 |
muscle cancer | 2.79e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.