FFCP PHASE1:Hg19::chr2:72742867..72742891,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17085|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000485398_5end|coexpression_cluster_id=C63|description=CAGE_peak_5_at_EXOC6B_5end|id=chr2:72742867..72742891,-|ontology_enrichment_celltype=CL:0002274!4.26e-12!5;CL:0000457!4.26e-12!5;CL:0002191!4.26e-12!5;CL:0000097!4.26e-12!5;CL:0000831!4.26e-12!5;CL:0002028!4.26e-12!5|ontology_enrichment_celltype_v019=CL:0000097;4.55e-10;5!CL:0000197;3.76e-08;6!CL:0000098;3.76e-08;6!CL:0002167;3.76e-08;6|ontology_enrichment_celltype_v019_2=CL:0000097,4.55e-10,5;CL:0002028,4.55e-10,5;CL:0000197,4.04e-08,6;CL:0000098,4.04e-08,6;CL:0002167,4.04e-08,6|ontology_enrichment_development_v019=UBERON:0005425;1.40e-12;1|ontology_enrichment_disease=DOID:171!1.94e-10!10|ontology_enrichment_disease_v019=DOID:171;2.80e-18;10!DOID:2513;1.86e-12;1!DOID:3095;1.97e-08;22!DOID:2994;1.97e-08;22!DOID:3451;7.40e-07;2!DOID:4159;7.40e-07;2!DOID:0060122;7.40e-07;2!DOID:3193;7.40e-07;2!DOID:962;7.40e-07;2|ontology_enrichment_disease_v019_2=DOID:171,2.87e-18,10;DOID:2513,1.57e-12,1;DOID:3095,1.99e-08,22;DOID:2994,1.99e-08,22;DOID:3451,6.80e-07,2;DOID:4159,6.80e-07,2;DOID:0060122,6.80e-07,2;DOID:3193,7.61e-07,2;DOID:962,7.61e-07,2|ontology_enrichment_uberon=UBERON:0002346!9.59e-18!90;UBERON:0000073!4.73e-17!94;UBERON:0001016!4.73e-17!94;UBERON:0001049!3.69e-16!57;UBERON:0005068!3.69e-16!57;UBERON:0006241!3.69e-16!57;UBERON:0007135!3.69e-16!57;UBERON:0001893!7.06e-16!34;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0002616!2.99e-15!59;UBERON:0003080!3.58e-15!42;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0002791!1.07e-14!33;UBERON:0000955!2.19e-14!69;UBERON:0006238!2.19e-14!69;UBERON:0001017!2.61e-14!82;UBERON:0007023!5.83e-14!115;UBERON:0002020!6.46e-14!34;UBERON:0003528!6.46e-14!34;UBERON:0001869!2.62e-13!32;UBERON:0005743!2.74e-13!86;UBERON:0000924!1.68e-11!173;UBERON:0006601!1.68e-11!173;UBERON:0003056!4.77e-11!61;UBERON:0002619!9.22e-10!22;UBERON:0004121!1.63e-09!169;UBERON:0001950!4.89e-09!20;UBERON:0000956!2.48e-08!25;UBERON:0000203!2.48e-08!25;UBERON:0002420!5.82e-08!9;UBERON:0007245!5.82e-08!9;UBERON:0010009!5.82e-08!9;UBERON:0010011!5.82e-08!9;UBERON:0000454!5.82e-08!9;UBERON:0000033!6.61e-08!123;UBERON:0002308!9.41e-08!9;UBERON:0000125!9.41e-08!9;UBERON:0009663!2.17e-07!7;UBERON:0000153!3.29e-07!129;UBERON:0007811!3.29e-07!129;UBERON:0000013!4.36e-07!5;UBERON:0002410!4.36e-07!5;UBERON:0001872!9.44e-07!5|ontology_enrichment_uberon_v019=UBERON:0002346;4.74e-26;4!UBERON:0000923;4.74e-26;4!UBERON:0010316;4.74e-26;4!UBERON:0005291;4.74e-26;4!UBERON:0003714;2.95e-23;2!UBERON:0002050;5.57e-21;5!UBERON:0005423;5.57e-21;5!UBERON:0000941;1.40e-12;1!UBERON:0001785;1.40e-12;1!UBERON:0002464;1.40e-12;1!UBERON:0004904;1.40e-12;1!UBERON:0001021;1.40e-12;1!UBERON:0005162;6.42e-07;2!UBERON:0000122;6.42e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.12e-23,2;UBERON:0000941,1.40e-12,1;UBERON:0001785,1.40e-12,1;UBERON:0002464,1.40e-12,1;UBERON:0004904,1.40e-12,1;UBERON:0001021,1.40e-12,1;UBERON:0003902,1.40e-12,1;UBERON:0005425,1.40e-12,1;UBERON:0005162,6.42e-07,2;UBERON:0000122,6.42e-07,2|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5597942737566,7.48411689112421,0.621984346622316,0.576479813667846,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.356857977594324,0.630809660135739,1.28855556491985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,2.84074527747786,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0.511343412510774,0,3.73247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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17085 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485398_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_5_at_EXOC6B_5end | |||
|id=chr2:72742867..72742891,- | |||
|ontology_enrichment_celltype=CL:0002274!4.26e-12!5;CL:0000457!4.26e-12!5;CL:0002191!4.26e-12!5;CL:0000097!4.26e-12!5;CL:0000831!4.26e-12!5;CL:0002028!4.26e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.55e-10;5!CL:0000197;3.76e-08;6!CL:0000098;3.76e-08;6!CL:0002167;3.76e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.55e-10,5;CL:0002028,4.55e-10,5;CL:0000197,4.04e-08,6;CL:0000098,4.04e-08,6;CL:0002167,4.04e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.40e-12;1 | |||
|ontology_enrichment_disease=DOID:171!1.94e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.80e-18;10!DOID:2513;1.86e-12;1!DOID:3095;1.97e-08;22!DOID:2994;1.97e-08;22!DOID:3451;7.40e-07;2!DOID:4159;7.40e-07;2!DOID:0060122;7.40e-07;2!DOID:3193;7.40e-07;2!DOID:962;7.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.87e-18,10;DOID:2513,1.57e-12,1;DOID:3095,1.99e-08,22;DOID:2994,1.99e-08,22;DOID:3451,6.80e-07,2;DOID:4159,6.80e-07,2;DOID:0060122,6.80e-07,2;DOID:3193,7.61e-07,2;DOID:962,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!9.59e-18!90;UBERON:0000073!4.73e-17!94;UBERON:0001016!4.73e-17!94;UBERON:0001049!3.69e-16!57;UBERON:0005068!3.69e-16!57;UBERON:0006241!3.69e-16!57;UBERON:0007135!3.69e-16!57;UBERON:0001893!7.06e-16!34;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0002616!2.99e-15!59;UBERON:0003080!3.58e-15!42;UBERON:0003075!1.03e-14!86;UBERON:0007284!1.03e-14!86;UBERON:0002791!1.07e-14!33;UBERON:0000955!2.19e-14!69;UBERON:0006238!2.19e-14!69;UBERON:0001017!2.61e-14!82;UBERON:0007023!5.83e-14!115;UBERON:0002020!6.46e-14!34;UBERON:0003528!6.46e-14!34;UBERON:0001869!2.62e-13!32;UBERON:0005743!2.74e-13!86;UBERON:0000924!1.68e-11!173;UBERON:0006601!1.68e-11!173;UBERON:0003056!4.77e-11!61;UBERON:0002619!9.22e-10!22;UBERON:0004121!1.63e-09!169;UBERON:0001950!4.89e-09!20;UBERON:0000956!2.48e-08!25;UBERON:0000203!2.48e-08!25;UBERON:0002420!5.82e-08!9;UBERON:0007245!5.82e-08!9;UBERON:0010009!5.82e-08!9;UBERON:0010011!5.82e-08!9;UBERON:0000454!5.82e-08!9;UBERON:0000033!6.61e-08!123;UBERON:0002308!9.41e-08!9;UBERON:0000125!9.41e-08!9;UBERON:0009663!2.17e-07!7;UBERON:0000153!3.29e-07!129;UBERON:0007811!3.29e-07!129;UBERON:0000013!4.36e-07!5;UBERON:0002410!4.36e-07!5;UBERON:0001872!9.44e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.74e-26;4!UBERON:0000923;4.74e-26;4!UBERON:0010316;4.74e-26;4!UBERON:0005291;4.74e-26;4!UBERON:0003714;2.95e-23;2!UBERON:0002050;5.57e-21;5!UBERON:0005423;5.57e-21;5!UBERON:0000941;1.40e-12;1!UBERON:0001785;1.40e-12;1!UBERON:0002464;1.40e-12;1!UBERON:0004904;1.40e-12;1!UBERON:0001021;1.40e-12;1!UBERON:0005162;6.42e-07;2!UBERON:0000122;6.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.12e-23,2;UBERON:0000941,1.40e-12,1;UBERON:0001785,1.40e-12,1;UBERON:0002464,1.40e-12,1;UBERON:0004904,1.40e-12,1;UBERON:0001021,1.40e-12,1;UBERON:0003902,1.40e-12,1;UBERON:0005425,1.40e-12,1;UBERON:0005162,6.42e-07,2;UBERON:0000122,6.42e-07,2 | |||
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|short_description=p5@EXOC6B | |||
}} |
Revision as of 19:41, 12 September 2013
Short description: | p5@EXOC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_EXOC6B_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 0bp_to_ENST00000485398_5end |
EntrezGene: | EXOC6B |
HGNC: | 17085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.55e-10 | 5 |
basophil mast progenitor cell | 4.55e-10 | 5 |
receptor cell | 4.04e-08 | 6 |
sensory epithelial cell | 4.04e-08 | 6 |
olfactory epithelial cell | 4.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.12e-23 | 2 |
cranial nerve II | 1.40e-12 | 1 |
cranial nerve | 1.40e-12 | 1 |
nerve trunk | 1.40e-12 | 1 |
nerve connecting eye with brain | 1.40e-12 | 1 |
nerve | 1.40e-12 | 1 |
retinal neural layer | 1.40e-12 | 1 |
presumptive neural retina | 1.40e-12 | 1 |
multi cell component structure | 6.42e-07 | 2 |
neuron projection bundle | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.87e-18 | 10 |
basal cell carcinoma | 1.57e-12 | 1 |
germ cell and embryonal cancer | 1.99e-08 | 22 |
germ cell cancer | 1.99e-08 | 22 |
skin carcinoma | 6.80e-07 | 2 |
skin cancer | 6.80e-07 | 2 |
integumentary system cancer | 6.80e-07 | 2 |
peripheral nerve sheath neoplasm | 7.61e-07 | 2 |
neurofibroma | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.