FFCP PHASE1:Hg19::chr3:119298314..119298392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=141|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=269|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000485496_5end|coexpression_cluster_id=C2675|description=CAGE_peak_2_at_ADPRH_5end|id=chr3:119298314..119298392,+|ontology_enrichment_celltype=CL:0000557!6.12e-31!71;CL:0002009!3.70e-29!65;CL:0000839!5.49e-29!70;CL:0002194!8.11e-28!63;CL:0000576!8.11e-28!63;CL:0000040!8.11e-28!63;CL:0000559!8.11e-28!63;CL:0002057!8.36e-27!42;CL:0000766!1.23e-26!76;CL:0000860!8.74e-23!45;CL:0000763!4.90e-14!112;CL:0000049!4.90e-14!112;CL:0002031!1.93e-12!124;CL:0000738!2.58e-12!140;CL:0002087!5.18e-11!119;CL:0000988!3.11e-07!182|ontology_enrichment_celltype_v019=CL:0000860;1.99e-27;33!CL:0002057;1.99e-27;33!CL:0000473;4.56e-26;39!CL:0000234;4.56e-26;39!CL:0000576;1.03e-23;48!CL:0000766;4.00e-19;69!CL:0000763;1.19e-07;100!CL:0000738;4.07e-07;136|ontology_enrichment_celltype_v019_2=CL:0000557,6.64e-45,67;CL:0002009,4.56e-42,61;CL:0000839,5.93e-42,66;CL:0000766,1.95e-40,72;CL:0002194,3.19e-40,59;CL:0000576,3.19e-40,59;CL:0000040,3.19e-40,59;CL:0000559,3.19e-40,59;CL:0000473,4.34e-39,48;CL:0000234,4.34e-39,48;CL:0000860,1.91e-35,42;CL:0002057,1.91e-35,42;CL:0000763,1.67e-26,108;CL:0000049,1.67e-26,108;CL:0000738,2.00e-23,136;CL:0002031,5.36e-22,120;CL:0002087,1.36e-19,115;CL:0000988,2.13e-16,177;CL:0000037,1.86e-15,168;CL:0002032,2.07e-15,161;CL:0000837,2.07e-15,161;CL:0000134,4.71e-11,354;CL:0002320,4.72e-10,361;CL:0000219,2.91e-09,386;CL:0000048,3.89e-09,427;CL:0000723,2.04e-08,433;CL:0000034,7.71e-08,441;CL:0002393,4.86e-07,9;CL:0002397,4.86e-07,9|ontology_enrichment_development_v019=CL:0002057;7.08e-26;42!CL:0000049;3.86e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.92e-30!112;UBERON:0002371!5.75e-29!80;UBERON:0003081!9.00e-28!216;UBERON:0002390!1.75e-27!102;UBERON:0003061!1.75e-27!102;UBERON:0001474!1.66e-24!86;UBERON:0002405!7.89e-24!115;UBERON:0004765!1.43e-20!101;UBERON:0001434!1.43e-20!101;UBERON:0002204!5.34e-15!167;UBERON:0000926!1.86e-10!448;UBERON:0004120!1.86e-10!448;UBERON:0006603!1.86e-10!448;UBERON:0000480!4.27e-08!626;UBERON:0000468!4.41e-08!659;UBERON:0000467!4.55e-08!625|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.34e-43,93;UBERON:0002193,2.70e-41,108;UBERON:0002371,3.48e-41,76;UBERON:0002390,9.38e-38,98;UBERON:0003061,9.38e-38,98;UBERON:0001474,6.41e-36,82;UBERON:0003081,2.32e-30,203;UBERON:0004765,4.53e-30,90;UBERON:0001434,1.07e-27,100;UBERON:0000926,1.59e-22,315;UBERON:0004120,1.59e-22,315;UBERON:0006603,1.59e-22,315;UBERON:0002204,1.52e-17,167;UBERON:0002384,1.70e-09,371|phase1_expression=1.99846217197612,1.92690471501885,2.25527046553554,2.00146596706261,1.34088328328186,0.872338524100369,0,0,1.04474251279935,0.737201809504527,0.697801167972428,1.09220686065086,1.31883489114227,0,0.662794751455832,1.34465029290355,0,0,0,2.09305798730539,1.22400414746552,0.313454721478088,0.85870796139317,0.821246550437305,0.502170558379211,2.59805579543034,2.21671591514854,2.51874500203774,3.54027849164014,1.15148819429164,5.26374819274658,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.880801318004542,10.5259127621057,14.6397446653203,14.1057065965304,4.25439401055856,3.88672399222775,2.83333124397605,6.83371722263954,12.8477820854195,8.73302620276138,13.248455103624,11.9238687526329,14.865905802965,20.7138522471948,26.3845527724974,16.553756092201,6.20542225325913,7.74581620300591,4.06279459783025,7.15320890261898,8.18718450173537,5.16864014223695,12.549439587207,13.799948164272,10.8687311385837,20.4507806115764,25.3318845179472,19.1801137739712,20.6048559426295,27.8018760098659,15.5705562248894,15.0749199154046,20.8593167368081,12.5969529928968,17.5565855763677,15.0993830754902,13.9243450473989,4.64761629886272,6.16552469898626,5.2414661377094,5.61643155732475,5.25619124945272,3.2145117339416,2.56511469367124,1.59133341759272,1.0959849225878,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,1.52909291250092,0,2.24203425192614,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.768547918354051,0.780356085359269,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.639312809217652,1.80719576192283,2.00535164254356,1.73815822752988,3.1811437882044,3.40644409211845,0.756278537312543,0.665188192387692,0.527008714158756,1.70272798147026,0.728590576585084,0.741568885568859,5.8418530857843,3.83085422058388,4.65352861816028,0.715471872916026,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0,0.838998872419812,0.550236083880135,0.417989933073621,2.06733407335463,1.42306505074684,1.00416183829401,1.61131726843659,1.52054421143703,1.22031028774085,2.20597848207521,0.81014194788176,1.69669483739752,1.7962349810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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=269 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485496_5end | |||
|coexpression_cluster_id=C2675 | |||
|description=CAGE_peak_2_at_ADPRH_5end | |||
|id=chr3:119298314..119298392,+ | |||
|ontology_enrichment_celltype=CL:0000557!6.12e-31!71;CL:0002009!3.70e-29!65;CL:0000839!5.49e-29!70;CL:0002194!8.11e-28!63;CL:0000576!8.11e-28!63;CL:0000040!8.11e-28!63;CL:0000559!8.11e-28!63;CL:0002057!8.36e-27!42;CL:0000766!1.23e-26!76;CL:0000860!8.74e-23!45;CL:0000763!4.90e-14!112;CL:0000049!4.90e-14!112;CL:0002031!1.93e-12!124;CL:0000738!2.58e-12!140;CL:0002087!5.18e-11!119;CL:0000988!3.11e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-27;33!CL:0002057;1.99e-27;33!CL:0000473;4.56e-26;39!CL:0000234;4.56e-26;39!CL:0000576;1.03e-23;48!CL:0000766;4.00e-19;69!CL:0000763;1.19e-07;100!CL:0000738;4.07e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.64e-45,67;CL:0002009,4.56e-42,61;CL:0000839,5.93e-42,66;CL:0000766,1.95e-40,72;CL:0002194,3.19e-40,59;CL:0000576,3.19e-40,59;CL:0000040,3.19e-40,59;CL:0000559,3.19e-40,59;CL:0000473,4.34e-39,48;CL:0000234,4.34e-39,48;CL:0000860,1.91e-35,42;CL:0002057,1.91e-35,42;CL:0000763,1.67e-26,108;CL:0000049,1.67e-26,108;CL:0000738,2.00e-23,136;CL:0002031,5.36e-22,120;CL:0002087,1.36e-19,115;CL:0000988,2.13e-16,177;CL:0000037,1.86e-15,168;CL:0002032,2.07e-15,161;CL:0000837,2.07e-15,161;CL:0000134,4.71e-11,354;CL:0002320,4.72e-10,361;CL:0000219,2.91e-09,386;CL:0000048,3.89e-09,427;CL:0000723,2.04e-08,433;CL:0000034,7.71e-08,441;CL:0002393,4.86e-07,9;CL:0002397,4.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.08e-26;42!CL:0000049;3.86e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.92e-30!112;UBERON:0002371!5.75e-29!80;UBERON:0003081!9.00e-28!216;UBERON:0002390!1.75e-27!102;UBERON:0003061!1.75e-27!102;UBERON:0001474!1.66e-24!86;UBERON:0002405!7.89e-24!115;UBERON:0004765!1.43e-20!101;UBERON:0001434!1.43e-20!101;UBERON:0002204!5.34e-15!167;UBERON:0000926!1.86e-10!448;UBERON:0004120!1.86e-10!448;UBERON:0006603!1.86e-10!448;UBERON:0000480!4.27e-08!626;UBERON:0000468!4.41e-08!659;UBERON:0000467!4.55e-08!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.34e-43,93;UBERON:0002193,2.70e-41,108;UBERON:0002371,3.48e-41,76;UBERON:0002390,9.38e-38,98;UBERON:0003061,9.38e-38,98;UBERON:0001474,6.41e-36,82;UBERON:0003081,2.32e-30,203;UBERON:0004765,4.53e-30,90;UBERON:0001434,1.07e-27,100;UBERON:0000926,1.59e-22,315;UBERON:0004120,1.59e-22,315;UBERON:0006603,1.59e-22,315;UBERON:0002204,1.52e-17,167;UBERON:0002384,1.70e-09,371 | |||
|phase1_expression=1.99846217197612,1.92690471501885,2.25527046553554,2.00146596706261,1.34088328328186,0.872338524100369,0,0,1.04474251279935,0.737201809504527,0.697801167972428,1.09220686065086,1.31883489114227,0,0.662794751455832,1.34465029290355,0,0,0,2.09305798730539,1.22400414746552,0.313454721478088,0.85870796139317,0.821246550437305,0.502170558379211,2.59805579543034,2.21671591514854,2.51874500203774,3.54027849164014,1.15148819429164,5.26374819274658,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.880801318004542,10.5259127621057,14.6397446653203,14.1057065965304,4.25439401055856,3.88672399222775,2.83333124397605,6.83371722263954,12.8477820854195,8.73302620276138,13.248455103624,11.9238687526329,14.865905802965,20.7138522471948,26.3845527724974,16.553756092201,6.20542225325913,7.74581620300591,4.06279459783025,7.15320890261898,8.18718450173537,5.16864014223695,12.549439587207,13.799948164272,10.8687311385837,20.4507806115764,25.3318845179472,19.1801137739712,20.6048559426295,27.8018760098659,15.5705562248894,15.0749199154046,20.8593167368081,12.5969529928968,17.5565855763677,15.0993830754902,13.9243450473989,4.64761629886272,6.16552469898626,5.2414661377094,5.61643155732475,5.25619124945272,3.2145117339416,2.56511469367124,1.59133341759272,1.0959849225878,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,1.52909291250092,0,2.24203425192614,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.768547918354051,0.780356085359269,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.639312809217652,1.80719576192283,2.00535164254356,1.73815822752988,3.1811437882044,3.40644409211845,0.756278537312543,0.665188192387692,0.527008714158756,1.70272798147026,0.728590576585084,0.741568885568859,5.8418530857843,3.83085422058388,4.65352861816028,0.715471872916026,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0,0.838998872419812,0.550236083880135,0.417989933073621,2.06733407335463,1.42306505074684,1.00416183829401,1.61131726843659,1.52054421143703,1.22031028774085,2.20597848207521,0.81014194788176,1.69669483739752,1.79623498100936,2.13961812918312,0,0.949265659568129,0.916008719652036,0,0,0,1.98788780678127,0.506522046658319,0.264818361626438,0.860509862246441,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0.302714855289863,0,0,1.24864030732128,0.570471821544449,0.149448680551801,0.939475989150119,0.161872944368132,0.280901613404497,0,0.245668634623536,0.309977343527296,1.18800285728205,0.494533858557114,0,2.87447256726495,0,0,0.554128230968366,0.877955241761676,0.30648779579902,1.05166641234618,0.226864366320042,0.717558542755448,0.213557388818567,0,0.300091096084402,0.206105058476878,1.03056216018252,0.744467425326359,1.0126579934476,0.389748020644795,1.26216887122057,0.460249493211497,0,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0.518305275076852,0.504641701751257,0,1.56449532329816,1.28648187638577,4.14404764057442,1.39310378409594,0,0.118306800039844,0,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.737930631258681,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,1.27523445472584,0.587043471179108,3.03169540298255,3.70388410061289,3.61482889245737,0,0,4.43190610957315,2.10603838625314,2.37809859661965,0,0.503946384596579,0.425325291727159,0.179117045405697,0,0,1.97065295158377,4.75461543671421,9.95174954595706,44.821305512675,12.4980009092116,0.507983154337352,4.20187268114105,3.51652341630141,0,0.616964956219941,2.70308752059526,1.71495859578347,0.336393253036082,0,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,1.5985330740966,0.57191197463259,0.542621605391443,0.823240336780769,1.30294473717494,0,1.58390374586686,0.904318131178758,0,0.899756920638513,7.29742683847143,5.52482800575339,2.10833939483032,0.239624855491583,3.44585807502342,0,0.723906533337896,1.02738161275192,2.50685348535854,0,0.394061520403854,0.431255149719035,1.15508732651774,0.254094624222463,0,0,0,0,0,0,0,0,0,0.813795071099207,0.831883446123229,0.356857977594324,0.946214490203608,0.819989904948992,0.300946099727719,4.5481500811197,0,0,0.184369168541703,0.60818530127658,0.587403472388222,0.686286847621712,1.86091223510599,4.31428401637234,2.56146138728266,0.606255142892519,0,2.11673205330776,1.48864684691266,5.98501695823444,1.68396056659844,1.79394808957981,2.55853624533352,1.12597744800525,1.48418066444991,0.925258162815933,0.177561725313127,2.62806899244189,0,2.09178681227927,0.725156697549733,1.80455823272956,0.552485933615378,0.68888668898764,0.728364672026868,0.917870904715969,1.35359883872224,0.770153371044148,0,4.38417673959782,1.26661954671451,3.4120015221269,3.23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| |||
|short_description=p2@ADPRH | |||
}} |
Revision as of 21:01, 12 September 2013
Short description: | p2@ADPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ADPRH_5end |
Coexpression cluster: | C2675_Mast_CD14_immature_placenta_Basophils_Renal_chorionic |
Association with transcript: | 0bp_to_ENST00000485496_5end |
EntrezGene: | ADPRH |
HGNC: | 269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.64e-45 | 67 |
macrophage dendritic cell progenitor | 4.56e-42 | 61 |
myeloid lineage restricted progenitor cell | 5.93e-42 | 66 |
myeloid leukocyte | 1.95e-40 | 72 |
monopoietic cell | 3.19e-40 | 59 |
monocyte | 3.19e-40 | 59 |
monoblast | 3.19e-40 | 59 |
promonocyte | 3.19e-40 | 59 |
defensive cell | 4.34e-39 | 48 |
phagocyte | 4.34e-39 | 48 |
classical monocyte | 1.91e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-35 | 42 |
myeloid cell | 1.67e-26 | 108 |
common myeloid progenitor | 1.67e-26 | 108 |
leukocyte | 2.00e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 5.36e-22 | 120 |
nongranular leukocyte | 1.36e-19 | 115 |
hematopoietic cell | 2.13e-16 | 177 |
hematopoietic stem cell | 1.86e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.07e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-15 | 161 |
mesenchymal cell | 4.71e-11 | 354 |
connective tissue cell | 4.72e-10 | 361 |
motile cell | 2.91e-09 | 386 |
multi fate stem cell | 3.89e-09 | 427 |
somatic stem cell | 2.04e-08 | 433 |
stem cell | 7.71e-08 | 441 |
intermediate monocyte | 4.86e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.34e-43 | 93 |
hemolymphoid system | 2.70e-41 | 108 |
bone marrow | 3.48e-41 | 76 |
hematopoietic system | 9.38e-38 | 98 |
blood island | 9.38e-38 | 98 |
bone element | 6.41e-36 | 82 |
lateral plate mesoderm | 2.32e-30 | 203 |
skeletal element | 4.53e-30 | 90 |
skeletal system | 1.07e-27 | 100 |
mesoderm | 1.59e-22 | 315 |
mesoderm-derived structure | 1.59e-22 | 315 |
presumptive mesoderm | 1.59e-22 | 315 |
musculoskeletal system | 1.52e-17 | 167 |
connective tissue | 1.70e-09 | 371 |
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